RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SMLR1H3BR10 107 aa10.92□□□□□ -0.66
CHCHD3-204ENST00000457942 ZNF324O75467 553 aaPredicted RBP10.92□□□□□ -0.66
CHCHD3-204ENST00000457942 EIF3GO75821 320 aaKnown RBP eCLIP10.92□□□□□ -0.66
CHCHD3-204ENST00000457942 IFNA5P01569 189 aa10.92□□□□□ -0.66
CHCHD3-204ENST00000457942 CRISP2P16562 243 aa10.92□□□□□ -0.66
CHCHD3-204ENST00000457942 ZNF138P52744 262 aa10.92□□□□□ -0.66
CHCHD3-204ENST00000457942 FFAR4Q5NUL3 377 aa10.92□□□□□ -0.66
CHCHD3-204ENST00000457942 SCGB1C1Q8TD33 95 aa10.92□□□□□ -0.66
CHCHD3-204ENST00000457942 FXYD5Q96DB9 178 aa10.92□□□□□ -0.66
CHCHD3-204ENST00000457942 LINC00467Q9BRT7 94 aa10.92□□□□□ -0.66
CHCHD3-204ENST00000457942 ZNF492Q9P255 531 aa10.92□□□□□ -0.66
CHCHD3-204ENST00000457942 KLF12Q9Y4X4 402 aa10.92□□□□□ -0.66
CHCHD3-204ENST00000457942 IGHV1OR15-1A0A075B7D0 117 aa10.91□□□□□ -0.66
CHCHD3-204ENST00000457942 IGHV3-53P01767 116 aa10.91□□□□□ -0.66
CHCHD3-204ENST00000457942 NMBP08949 121 aa10.91□□□□□ -0.66
CHCHD3-204ENST00000457942 TCL1AP56279 114 aa10.91□□□□□ -0.66
CHCHD3-204ENST00000457942 RANP62826 216 aaKnown RBP10.91□□□□□ -0.66
CHCHD3-204ENST00000457942 ESRGQ1W209 222 aa10.91□□□□□ -0.66
CHCHD3-204ENST00000457942 PRR9Q5T870 116 aa10.91□□□□□ -0.66
CHCHD3-204ENST00000457942 ZFAND2AQ8N6M9 145 aa10.91□□□□□ -0.66
CHCHD3-204ENST00000457942 OR2T35Q8NGX2 323 aa10.91□□□□□ -0.66
CHCHD3-204ENST00000457942 MRPL16Q9NX20 251 aaKnown RBP10.91□□□□□ -0.66
CHCHD3-204ENST00000457942 MRPS16Q9Y3D3 137 aaKnown RBP10.91□□□□□ -0.66
CHCHD3-204ENST00000457942 ZNF415Q09FC8 603 aa10.9□□□□□ -0.66
CHCHD3-204ENST00000457942 KHDC3LQ587J8 217 aa10.9□□□□□ -0.66
CHCHD3-204ENST00000457942 IBA57Q5T440 356 aaKnown RBP10.9□□□□□ -0.66
CHCHD3-204ENST00000457942 Q9H3A6 140 aa10.9□□□□□ -0.66
CHCHD3-204ENST00000457942 TP53TG3Q9ULZ0 132 aa10.9□□□□□ -0.66
CHCHD3-204ENST00000457942 DMBT1Q9UGM3 2413 aaPredicted RBP10.9□□□□□ -0.66
CHCHD3-204ENST00000457942 SPINK4O60575 86 aa10.89□□□□□ -0.67
CHCHD3-204ENST00000457942 TAS2R45P59539 299 aa10.89□□□□□ -0.67
CHCHD3-204ENST00000457942 MUC21Q5SSG8 566 aa10.89□□□□□ -0.67
CHCHD3-204ENST00000457942 SPATA12Q7Z6I5 190 aa10.89□□□□□ -0.67
CHCHD3-204ENST00000457942 VSIG2Q96IQ7 327 aa10.89□□□□□ -0.67
CHCHD3-204ENST00000457942 UPK3BQ9BT76 320 aa10.89□□□□□ -0.67
CHCHD3-204ENST00000457942 RPH3ALQ9UNE2 315 aa10.89□□□□□ -0.67
CHCHD3-204ENST00000457942 A0A096LPF7 62 aa10.88□□□□□ -0.67
CHCHD3-204ENST00000457942 G3V3Q6 166 aa10.88□□□□□ -0.67
CHCHD3-204ENST00000457942 PAX4O43316 350 aa10.88□□□□□ -0.67
CHCHD3-204ENST00000457942 Q6ZQT7 251 aa10.88□□□□□ -0.67
CHCHD3-204ENST00000457942 HSD17B11Q8NBQ5 300 aa10.88□□□□□ -0.67
CHCHD3-204ENST00000457942 ST6GAL2Q96JF0 529 aa10.88□□□□□ -0.67
CHCHD3-204ENST00000457942 HYLS1Q96M11 299 aa10.88□□□□□ -0.67
CHCHD3-204ENST00000457942 C18orf15Q96N68 181 aa10.88□□□□□ -0.67
CHCHD3-204ENST00000457942 AQP10Q96PS8 301 aa10.88□□□□□ -0.67
CHCHD3-204ENST00000457942 KRTAP1-5Q9BYS1 174 aa10.88□□□□□ -0.67
CHCHD3-204ENST00000457942 ICOSQ9Y6W8 199 aa10.88□□□□□ -0.67
CHCHD3-204ENST00000457942 RNF222A6NCQ9 220 aa10.87□□□□□ -0.67
CHCHD3-204ENST00000457942 LYPD1Q8N2G4 141 aa10.87□□□□□ -0.67
CHCHD3-204ENST00000457942 CMTM2Q8TAZ6 248 aa10.87□□□□□ -0.67
CHCHD3-204ENST00000457942 NAGKQ9UJ70 344 aa10.87□□□□□ -0.67
CHCHD3-204ENST00000457942 TRBV7-9A0A0J9YWB2 115 aa10.86□□□□□ -0.67
CHCHD3-204ENST00000457942 A0A1W2PPQ1 181 aa10.86□□□□□ -0.67
CHCHD3-204ENST00000457942 RBAKDNA6NC62 111 aa10.86□□□□□ -0.67
CHCHD3-204ENST00000457942 RAB2AP61019 212 aa10.86□□□□□ -0.67
CHCHD3-204ENST00000457942 INO80EQ8NBZ0 244 aaPredicted RBP10.86□□□□□ -0.67
CHCHD3-204ENST00000457942 TNFSF18Q9UNG2 199 aa10.86□□□□□ -0.67
CHCHD3-204ENST00000457942 DIRC3C9JPN6 131 aa10.85□□□□□ -0.67
CHCHD3-204ENST00000457942 ARPC5O15511 151 aa10.85□□□□□ -0.67
CHCHD3-204ENST00000457942 ZNF266Q14584 549 aa10.85□□□□□ -0.67
CHCHD3-204ENST00000457942 ACOT6Q3I5F7 207 aaPredicted RBP10.85□□□□□ -0.67
CHCHD3-204ENST00000457942 FAM74A1Q5RGS3 127 aa10.85□□□□□ -0.67
CHCHD3-204ENST00000457942 FAM159AQ6UWV7 190 aa10.85□□□□□ -0.67
CHCHD3-204ENST00000457942 ASB13Q8WXK3 278 aa10.85□□□□□ -0.67
CHCHD3-204ENST00000457942 C8orf49Q96NF6 230 aa10.85□□□□□ -0.67
CHCHD3-204ENST00000457942 PRO0255Q9UI72 69 aa10.85□□□□□ -0.67
CHCHD3-204ENST00000457942 TRGV11A0A075B6L2 103 aa10.84□□□□□ -0.67
CHCHD3-204ENST00000457942 TRGV4A0A0C4DH28 118 aa10.84□□□□□ -0.67
CHCHD3-204ENST00000457942 A0A1W2PPV4 95 aa10.84□□□□□ -0.67
CHCHD3-204ENST00000457942 SIVA1O15304 175 aa10.84□□□□□ -0.67
CHCHD3-204ENST00000457942 HMGB3O15347 200 aaKnown RBP10.84□□□□□ -0.67
CHCHD3-204ENST00000457942 SLAQ13239 276 aa10.84□□□□□ -0.67
CHCHD3-204ENST00000457942 TMEM183BQ1AE95 376 aa10.84□□□□□ -0.67
CHCHD3-204ENST00000457942 RPL7L1Q6DKI1 246 aaKnown RBP10.84□□□□□ -0.67
CHCHD3-204ENST00000457942 TMEM183AQ8IXX5 376 aa10.84□□□□□ -0.67
CHCHD3-204ENST00000457942 SH3BGRL3Q9H299 93 aa10.84□□□□□ -0.67
CHCHD3-204ENST00000457942 OTORQ9NRC9 128 aa10.84□□□□□ -0.67
CHCHD3-204ENST00000457942 HHLA3Q9XRX5 114 aa10.84□□□□□ -0.67
CHCHD3-204ENST00000457942 NXPH4O95158 308 aa10.83□□□□□ -0.68
CHCHD3-204ENST00000457942 ATP6V0CP27449 155 aa10.83□□□□□ -0.68
CHCHD3-204ENST00000457942 PCNPQ8WW12 178 aaKnown RBP10.83□□□□□ -0.68
CHCHD3-204ENST00000457942 MDFICQ9P1T7 246 aa10.83□□□□□ -0.68
CHCHD3-204ENST00000457942 LENEPQ9Y5L5 61 aa10.83□□□□□ -0.68
CHCHD3-204ENST00000457942 PGPA6NDG6 321 aa10.82□□□□□ -0.68
CHCHD3-204ENST00000457942 CRYBA4P53673 196 aa10.82□□□□□ -0.68
CHCHD3-204ENST00000457942 LINC00315P59091 139 aa10.82□□□□□ -0.68
CHCHD3-204ENST00000457942 KRTAP10-2P60368 255 aa10.82□□□□□ -0.68
CHCHD3-204ENST00000457942 MRPL23Q16540 153 aaKnown RBP10.82□□□□□ -0.68
CHCHD3-204ENST00000457942 Q6AWC8 147 aa10.82□□□□□ -0.68
CHCHD3-204ENST00000457942 GOLT1AQ6ZVE7 132 aa10.82□□□□□ -0.68
CHCHD3-204ENST00000457942 hCG_2014768A0A024R1R8 64 aa10.81□□□□□ -0.68
CHCHD3-204ENST00000457942 EPM2AB3EWF7 344 aa10.81□□□□□ -0.68
CHCHD3-204ENST00000457942 SFTA3P0C7M3 94 aa10.81□□□□□ -0.68
CHCHD3-204ENST00000457942 FHL2Q14192 279 aa10.81□□□□□ -0.68
CHCHD3-204ENST00000457942 PQLC2Q6ZP29 291 aa10.81□□□□□ -0.68
CHCHD3-204ENST00000457942 SPXQ9BT56 116 aa10.81□□□□□ -0.68
CHCHD3-204ENST00000457942 MYCBP2O75592 4640 aa10.81□□□□□ -0.68
CHCHD3-204ENST00000457942 F6UZH7 168 aa10.8□□□□□ -0.68
CHCHD3-204ENST00000457942 INAFM2P0DMQ5 153 aa10.8□□□□□ -0.68
CHCHD3-204ENST00000457942 BTF3P20290 206 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 253.2 ms