RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 ZNF688P0C7X2 276 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 CRISP2P16562 243 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 TSPOP30536 169 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 RPS20P60866 119 aaKnown RBP6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 HIST1H1AQ02539 215 aaPredicted RBP6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 OR5I1Q13606 314 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 Q6AWC8 147 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 PRR27Q6MZM9 219 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 APRG1Q8IVJ8 170 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 NHLRC2Q8NBF2 726 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 ZC2HC1AQ96GY0 325 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 SGK494Q96LW2 274 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 YPEL4Q96NS1 127 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 CLUHP3Q96NS8 147 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 GPR61Q9BZJ8 451 aa6.67□□□□□ -1.34
CDC42EP3-204ENST00000457889 SMIM27A0A1W2PRY6 76 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 A8MTW9 85 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 FABP5P3A8MUU1 101 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 PFN1P07737 140 aaKnown RBP6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 LEPP41159 167 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 TFPI2P48307 235 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 ELOBQ15370 118 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 COX19Q49B96 90 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 C9orf66Q5T8R8 295 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 WFDC3Q8IUB2 231 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 NUDT10Q8NFP7 164 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 Q8TAT8 98 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 TSKUQ8WUA8 353 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 NUDT11Q96G61 164 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 FAM19A4Q96LR4 140 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 PYGO2Q9BRQ0 406 aa6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 RNASE7Q9H1E1 156 aaKnown RBP6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 ZNF256Q9Y2P7 627 aaPredicted RBP6.66□□□□□ -1.34
CDC42EP3-204ENST00000457889 CUBNO60494 3623 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 COLCA2A8K830 154 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 TYMSP04818 313 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 CXCL1P09341 107 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 HLA-DRB4P13762 266 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 ERCC8Q13216 396 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 RASL11AQ6T310 242 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 FAM24BQ8N5W8 94 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 C3orf56Q8N813 242 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 WFDC9Q8NEX5 89 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 MAP6D1Q9H9H5 199 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 NAT8BQ9UHF3 227 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 HLA-DRB4X5D2U9 266 aa6.65□□□□□ -1.34
CDC42EP3-204ENST00000457889 TRAV21A0A0B4J279 112 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 A0A1W2PPQ1 181 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 KLLNB2CW77 178 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 OR11H12B2RN74 326 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 SH2D1AO60880 128 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 AMBPP02760 352 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 RAB5AP20339 215 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 FOXA3P55318 350 aaPredicted RBP6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 FAM3BP58499 235 aaPredicted RBP6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 DEFB131AP59861 70 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 BEAN1Q3B7T3 259 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 C12orf54Q6X4T0 127 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 ATP5L2Q7Z4Y8 100 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 PRIMA1Q86XR5 153 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 ZFAND2AQ8N6M9 145 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 OR2D3Q8NGH3 330 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 FAM210BQ96KR6 192 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 C8orf49Q96NF6 230 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 URGCP-MRPS24S4R325 110 aa6.64□□□□□ -1.35
CDC42EP3-204ENST00000457889 TENM1Q9UKZ4 2725 aa6.63□□□□□ -1.35
CDC42EP3-204ENST00000457889 A0A1B0GW15 77 aa6.63□□□□□ -1.35
CDC42EP3-204ENST00000457889 TMEM189A5PLL7 270 aa6.63□□□□□ -1.35
CDC42EP3-204ENST00000457889 IZUMO1RA6ND01 250 aa6.63□□□□□ -1.35
CDC42EP3-204ENST00000457889 GPX1P07203 203 aa6.63□□□□□ -1.35
CDC42EP3-204ENST00000457889 CDKN1BP46527 198 aa6.63□□□□□ -1.35
CDC42EP3-204ENST00000457889 CRIP1P50238 77 aa6.63□□□□□ -1.35
CDC42EP3-204ENST00000457889 HIST2H2BDQ6DRA6 164 aa6.63□□□□□ -1.35
CDC42EP3-204ENST00000457889 LINC00322Q6ZN03 302 aaPredicted RBP6.63□□□□□ -1.35
CDC42EP3-204ENST00000457889 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.63□□□□□ -1.35
CDC42EP3-204ENST00000457889 ZMAT5Q9UDW3 170 aaKnown RBP6.63□□□□□ -1.35
CDC42EP3-204ENST00000457889 HIGD1CA8MV81 97 aa6.62□□□□□ -1.35
CDC42EP3-204ENST00000457889 F6UB75 175 aa6.62□□□□□ -1.35
CDC42EP3-204ENST00000457889 H3BMM0 161 aa6.62□□□□□ -1.35
CDC42EP3-204ENST00000457889 MT-ND6P03923 174 aa6.62□□□□□ -1.35
CDC42EP3-204ENST00000457889 S100A8P05109 93 aa6.62□□□□□ -1.35
CDC42EP3-204ENST00000457889 NUTF2P61970 127 aaKnown RBP6.62□□□□□ -1.35
CDC42EP3-204ENST00000457889 ODF3L2Q3SX64 289 aa6.62□□□□□ -1.35
CDC42EP3-204ENST00000457889 WDR73Q6P4I2 378 aa6.62□□□□□ -1.35
CDC42EP3-204ENST00000457889 BORCS7Q96B45 105 aa6.62□□□□□ -1.35
CDC42EP3-204ENST00000457889 NEU1Q99519 415 aa6.62□□□□□ -1.35
CDC42EP3-204ENST00000457889 C20orf144Q9BQM9 153 aa6.62□□□□□ -1.35
CDC42EP3-204ENST00000457889 SRD5A3Q9H8P0 318 aa6.62□□□□□ -1.35
CDC42EP3-204ENST00000457889 TGIF2-C20orf24A0A0A6YYL0 155 aa6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 C7orf71A4D174 169 aa6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 F2Z2F3 143 aa6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 ZNF705DP0CH99 300 aaPredicted RBP6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 ZNF705BP0CI00 300 aaPredicted RBP6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 MED14OSP0DP75 135 aa6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 CTRLP40313 264 aa6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 ZNF80P51504 273 aaPredicted RBP6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 ACTL10Q5JWF8 245 aa6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 AMTNQ6UX39 209 aa6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 GTSCR1Q86UQ5 136 aa6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 KCNS1Q96KK3 526 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms