RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 OR10G8Q8NGN5 311 aa6.46□□□□□ -1.38
RIF1-208ENST00000457745 ZNF747Q9BV97 191 aa6.46□□□□□ -1.38
RIF1-208ENST00000457745 SIGLEC8Q9NYZ4 499 aa6.46□□□□□ -1.38
RIF1-208ENST00000457745 NOTCH3Q9UM47 2321 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 RBAKDNA6NC62 111 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 H7BYZ3 331 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 M0QZ24 198 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 SPRY2O43597 315 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 PF4P02776 101 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 IGLL1P15814 213 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 S100A7P31151 101 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 CSN1S1P47710 185 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 ZNF138P52744 262 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 CDPF1Q6NVV7 123 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 COX8CQ7Z4L0 72 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 ARL6IP6Q8N6S5 226 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 GTSF1Q8WW33 167 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 OSTCQ9NRP0 149 aa6.45□□□□□ -1.38
RIF1-208ENST00000457745 TMSB15BA0A087X1C1 80 aa6.44□□□□□ -1.38
RIF1-208ENST00000457745 IGKV3D-20A0A0C4DH25 116 aa6.44□□□□□ -1.38
RIF1-208ENST00000457745 A8MTW9 85 aa6.44□□□□□ -1.38
RIF1-208ENST00000457745 M0R2Z0 102 aa6.44□□□□□ -1.38
RIF1-208ENST00000457745 PRM2P04554 102 aa6.44□□□□□ -1.38
RIF1-208ENST00000457745 ERVFC1-1P60608 527 aa6.44□□□□□ -1.38
RIF1-208ENST00000457745 BEAN1Q3B7T3 259 aa6.44□□□□□ -1.38
RIF1-208ENST00000457745 FAM231DQ6ZW35 169 aa6.44□□□□□ -1.38
RIF1-208ENST00000457745 SAV1Q9H4B6 383 aaPredicted RBP6.44□□□□□ -1.38
RIF1-208ENST00000457745 SMCO4Q9NRQ5 59 aa6.44□□□□□ -1.38
RIF1-208ENST00000457745 TRAV12-2A0A075B6T6 113 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 TRAV2A0A0B4J234 112 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 SERTM2A0A1B0GWG4 89 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 B4DEV8 164 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 H3BMM0 161 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 CRXO43186 299 aaPredicted RBP6.43□□□□□ -1.38
RIF1-208ENST00000457745 GATCO43716 136 aaKnown RBP6.43□□□□□ -1.38
RIF1-208ENST00000457745 SPINK4O60575 86 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 MT-ND4LP03901 98 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 S100A9P06702 114 aaKnown RBP6.43□□□□□ -1.38
RIF1-208ENST00000457745 BMI1P35226 326 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 ACTL10Q5JWF8 245 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 IBA57Q5T440 356 aaKnown RBP6.43□□□□□ -1.38
RIF1-208ENST00000457745 RBPMS2Q6ZRY4 209 aaKnown RBP6.43□□□□□ -1.38
RIF1-208ENST00000457745 LURAP1LQ8IV03 231 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 SPAG8Q99932 426 aaPredicted RBP6.43□□□□□ -1.38
RIF1-208ENST00000457745 PYGO2Q9BRQ0 406 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 PPP1R14DQ9NXH3 145 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 IL36BQ9NZH7 164 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 ZFP30Q9Y2G7 519 aa6.43□□□□□ -1.38
RIF1-208ENST00000457745 TRAV25A0A0B4J276 109 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 MUC21A0A0G2JKD1 596 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 MUC21A0A140T8X8 626 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 GRIFINA4D1Z8 144 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 ZNF705GA8MUZ8 300 aaPredicted RBP6.42□□□□□ -1.38
RIF1-208ENST00000457745 KLLNB2CW77 178 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 PHOX2AO14813 284 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 GIG44P09565 113 aaPredicted RBP6.42□□□□□ -1.38
RIF1-208ENST00000457745 CRISP2P16562 243 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 ID1P41134 155 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 SPINK13Q1W4C9 94 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 MUC21Q5SSG8 566 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 TMEM78Q5T7P6 136 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 GFI1BQ5VTD9 330 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 OR4B1Q8NGF8 309 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 OR10J6PQ8NGY7 276 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 ANAPC16Q96DE5 110 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 NEU1Q99519 415 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 CTDSP1Q9GZU7 261 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 RPP21Q9H633 154 aaKnown RBP6.42□□□□□ -1.38
RIF1-208ENST00000457745 TUBA4BQ9H853 241 aa6.42□□□□□ -1.38
RIF1-208ENST00000457745 COL6A5A8TX70 2615 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 A0A1W2PPQ1 181 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 SMIM27A0A1W2PRY6 76 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 OR4C46A6NHA9 309 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 K7EQM0 130 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 HLA-DRB4P13762 266 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 RNASE4P34096 147 aaKnown RBP6.41□□□□□ -1.38
RIF1-208ENST00000457745 KRTAP10-11P60412 298 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 C12orf54Q6X4T0 127 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 FOXI2Q6ZQN5 318 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 WFDC9Q8NEX5 89 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 OR2D3Q8NGH3 330 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 SMIM12Q96EX1 92 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 LINC00477Q96M19 166 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 TMEM242Q9NWH2 141 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 CLEC5AQ9NY25 188 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 HLA-DRB4X5D2U9 266 aa6.41□□□□□ -1.38
RIF1-208ENST00000457745 ZNF324O75467 553 aaPredicted RBP6.4□□□□□ -1.38
RIF1-208ENST00000457745 P01737 135 aa6.4□□□□□ -1.38
RIF1-208ENST00000457745 FOXA3P55318 350 aaPredicted RBP6.4□□□□□ -1.38
RIF1-208ENST00000457745 SNRPD3P62318 126 aaKnown RBP6.4□□□□□ -1.38
RIF1-208ENST00000457745 ANXA2RQ3ZCQ2 193 aa6.4□□□□□ -1.38
RIF1-208ENST00000457745 SMUG1Q53HV7 270 aa6.4□□□□□ -1.38
RIF1-208ENST00000457745 TRPT1Q86TN4 253 aaKnown RBP6.4□□□□□ -1.38
RIF1-208ENST00000457745 Q8N1Y9 231 aa6.4□□□□□ -1.38
RIF1-208ENST00000457745 DEFB125Q8N687 156 aa6.4□□□□□ -1.38
RIF1-208ENST00000457745 C3orf56Q8N813 242 aa6.4□□□□□ -1.38
RIF1-208ENST00000457745 C15orf54Q8N8G6 183 aa6.4□□□□□ -1.38
RIF1-208ENST00000457745 NUP35Q8NFH5 326 aa6.4□□□□□ -1.38
RIF1-208ENST00000457745 TP53TG3Q9ULZ0 132 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms