RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 PRAC2D3DTV9 90 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 F8VRH5 84 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 F8W1H4 67 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 G3V4G9 280 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 H3BVH4 76 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 NDUFA4O00483 81 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 NPFFO15130 113 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 TRGV3P03979 118 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 MGPP08493 103 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 SCGB1A1P11684 91 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 HLA-DMBP28068 263 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 PPIFP30405 207 aaKnown RBP2.57□□□□□ -2
HMGN1P18-201ENST00000457642 SAA4P35542 130 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 ID1P41134 155 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 EFNA4P52798 201 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 TCF15Q12870 199 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 TM4SF20Q53R12 229 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 IGFL4Q6B9Z1 124 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 Q71RC1 249 aaPredicted RBP2.57□□□□□ -2
HMGN1P18-201ENST00000457642 PCP2Q8IVA1 136 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 RNF182Q8N6D2 247 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 PSMG3-AS1Q96PY0 264 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 JMJD8Q96S16 334 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 TM2D2Q9BX73 214 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 AGPAT4-IT1Q9H0P7 198 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 CSTL1Q9H114 145 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 UBTD1Q9HAC8 227 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 MRPL35Q9NZE8 188 aaKnown RBP2.57□□□□□ -2
HMGN1P18-201ENST00000457642 MSRB1Q9NZV6 116 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 MSRB2Q9Y3D2 182 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 CHTOPQ9Y3Y2 248 aaKnown RBP2.57□□□□□ -2
HMGN1P18-201ENST00000457642 ROS1P08922 2347 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 VCANP13611 3396 aa2.57□□□□□ -2
HMGN1P18-201ENST00000457642 EP300Q09472 2414 aaPredicted RBP2.56□□□□□ -2
HMGN1P18-201ENST00000457642 TRAV8-2A0A0B4J237 113 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 TRAV40A0A0B4J280 105 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 IGHV1-69DA0A0B4J2H0 117 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 IGKV3D-20A0A0C4DH25 116 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 IGHV7-4-1A0A0J9YVY3 117 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 CENPVL3A0A0U1RRI6 287 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 MYMXA0A1B0GTQ4 84 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 IGLL5B9A064 214 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 LY6HO94772 140 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 IGHG4P01861 327 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 PRB4P10163 310 aaPredicted RBP2.56□□□□□ -2
HMGN1P18-201ENST00000457642 ZFP36P26651 326 aaKnown RBP2.56□□□□□ -2
HMGN1P18-201ENST00000457642 GRNP28799 593 aaKnown RBP2.56□□□□□ -2
HMGN1P18-201ENST00000457642 CRIP2P52943 208 aaPredicted RBP2.56□□□□□ -2
HMGN1P18-201ENST00000457642 FXYD2P54710 66 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 SUMO2P61956 95 aaKnown RBP2.56□□□□□ -2
HMGN1P18-201ENST00000457642 RPL11P62913 178 aaKnown RBP2.56□□□□□ -2
HMGN1P18-201ENST00000457642 ADORA2A-AS1P86434 159 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 SCGB1D4Q6XE38 83 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 NEGR1Q7Z3B1 354 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 PIP4P2Q8N4L2 257 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 C5orf56Q8N8D9 126 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 NRACQ8N912 160 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 SYT8Q8NBV8 401 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 TOMM6Q96B49 74 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 USMG5Q96IX5 58 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 CCDC140Q96MF4 163 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 KIR2DL4Q99706 377 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 SPOCK3Q9BQ16 436 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 NAA38Q9BRA0 125 aaKnown RBP2.56□□□□□ -2
HMGN1P18-201ENST00000457642 PIMREGQ9BSJ6 248 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 VCX2Q9H322 139 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 CYSLTR1Q9Y271 337 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 RAXQ9Y2V3 346 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 U3KQE9 123 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 POLEQ07864 2286 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 ACACAQ13085 2346 aa2.56□□□□□ -2
HMGN1P18-201ENST00000457642 TPRP12270 2363 aaKnown RBP2.56□□□□□ -2
HMGN1P18-201ENST00000457642 MAP1BP46821 2468 aaKnown RBP2.56□□□□□ -2
HMGN1P18-201ENST00000457642 ANKHD1Q8IWZ3 2542 aaKnown RBP2.56□□□□□ -2
HMGN1P18-201ENST00000457642 IGLV2-18A0A075B6J9 118 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 IGHV3OR16-13A0A075B7E8 117 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 IGKV2D-26A0A0A0MRZ7 120 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 IGHV3-49A0A0A0MS15 119 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 IGHV3-74A0A0B4J1X5 117 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 TRAV26-2A0A0B4J265 109 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 CLPSL1A2RUU4 121 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 ZNF815PA8K554 130 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 E9PLD3 99 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 G3V318 75 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 J3KRW8 73 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 K7ERJ3 54 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 HOXA3O43365 443 aaPredicted RBP2.55□□□□□ -2
HMGN1P18-201ENST00000457642 SAP30O75446 220 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 BRI3O95415 125 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 ABCA1O95477 2261 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 IGHV1-69P01742 117 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 GATA1P15976 413 aaPredicted RBP2.55□□□□□ -2
HMGN1P18-201ENST00000457642 RNASE4P34096 147 aaKnown RBP2.55□□□□□ -2
HMGN1P18-201ENST00000457642 RIPPLY3P57055 190 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 RPL32P62910 135 aaKnown RBP2.55□□□□□ -2
HMGN1P18-201ENST00000457642 SRSF9Q13242 221 aaKnown RBP eCLIP2.55□□□□□ -2
HMGN1P18-201ENST00000457642 FOXE3Q13461 319 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 RRN3P1Q2M238 152 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 C12orf74Q32Q52 190 aa2.55□□□□□ -2
HMGN1P18-201ENST00000457642 GAGE13Q4V321 117 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 668.8 ms