RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 ZNF506Q5JVG8 444 aa10.36□□□□□ -0.75
HMGXB4-204ENST00000455359 COX8CQ7Z4L0 72 aa10.36□□□□□ -0.75
HMGXB4-204ENST00000455359 LINC00479Q96M42 142 aa10.36□□□□□ -0.75
HMGXB4-204ENST00000455359 LINC01587Q99440 93 aa10.36□□□□□ -0.75
HMGXB4-204ENST00000455359 PYGO2Q9BRQ0 406 aa10.36□□□□□ -0.75
HMGXB4-204ENST00000455359 LINC00467Q9BRT7 94 aa10.36□□□□□ -0.75
HMGXB4-204ENST00000455359 X6R8D5 127 aa10.36□□□□□ -0.75
HMGXB4-204ENST00000455359 SCO2A0A1W2PP80 73 aa10.35□□□□□ -0.75
HMGXB4-204ENST00000455359 TMEM189A5PLL7 270 aa10.35□□□□□ -0.75
HMGXB4-204ENST00000455359 TMEM250H0YL14 139 aa10.35□□□□□ -0.75
HMGXB4-204ENST00000455359 ZNF324O75467 553 aaPredicted RBP10.35□□□□□ -0.75
HMGXB4-204ENST00000455359 Q6AWC8 147 aa10.35□□□□□ -0.75
HMGXB4-204ENST00000455359 PRNTQ86SH4 94 aa10.35□□□□□ -0.75
HMGXB4-204ENST00000455359 Q86TA4 180 aa10.35□□□□□ -0.75
HMGXB4-204ENST00000455359 TVP23CQ96ET8 276 aa10.35□□□□□ -0.75
HMGXB4-204ENST00000455359 FAM210AQ96ND0 272 aa10.35□□□□□ -0.75
HMGXB4-204ENST00000455359 C11orf68Q9H3H3 251 aaKnown RBP10.35□□□□□ -0.75
HMGXB4-204ENST00000455359 TRAV12-3A0A0B4J271 114 aa10.34□□□□□ -0.75
HMGXB4-204ENST00000455359 TRAV34A0A0B4J273 112 aa10.34□□□□□ -0.75
HMGXB4-204ENST00000455359 TRAV21A0A0B4J279 112 aa10.34□□□□□ -0.75
HMGXB4-204ENST00000455359 LTAP01374 205 aa10.34□□□□□ -0.75
HMGXB4-204ENST00000455359 BTN1A1Q13410 526 aa10.34□□□□□ -0.75
HMGXB4-204ENST00000455359 KIR3DS1Q14943 382 aa10.34□□□□□ -0.75
HMGXB4-204ENST00000455359 RRN3P1Q2M238 152 aa10.34□□□□□ -0.75
HMGXB4-204ENST00000455359 SMUG1Q53HV7 270 aa10.34□□□□□ -0.75
HMGXB4-204ENST00000455359 ZNF493Q6ZR52 646 aa10.34□□□□□ -0.75
HMGXB4-204ENST00000455359 SGK494Q96LW2 274 aa10.34□□□□□ -0.75
HMGXB4-204ENST00000455359 SMDT1Q9H4I9 107 aa10.34□□□□□ -0.75
HMGXB4-204ENST00000455359 COL7A1Q02388 2944 aa10.34□□□□□ -0.75
HMGXB4-204ENST00000455359 IGHV3OR16-12A0A075B7B8 117 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 J3KRW8 73 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 RBMY1A1P0DJD3 496 aaKnown RBP10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 RBMY1CP0DJD4 496 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 RBMY1FQ15415 496 aaKnown RBP10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 CLLU1Q5K131 121 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 PRR9Q5T870 116 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 Q8NAQ8 132 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 SMIM12Q96EX1 92 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 EIF5A2Q9GZV4 153 aaKnown RBP10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 MED9Q9NWA0 146 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 IGHV4-28A0A0C4DH34 117 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 RPL35P42766 123 aaKnown RBP10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 IFITM2Q01629 132 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 ANXA2RQ3ZCQ2 193 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 TMEM183AQ8IXX5 376 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 EDA2RQ9HAV5 297 aa10.33□□□□□ -0.76
HMGXB4-204ENST00000455359 RGS13O14921 159 aa10.32□□□□□ -0.76
HMGXB4-204ENST00000455359 PFN1P07737 140 aaKnown RBP10.32□□□□□ -0.76
HMGXB4-204ENST00000455359 PEA15Q15121 130 aa10.32□□□□□ -0.76
HMGXB4-204ENST00000455359 TDRG1Q3Y452 100 aa10.32□□□□□ -0.76
HMGXB4-204ENST00000455359 TOR2AQ5JU69 321 aa10.32□□□□□ -0.76
HMGXB4-204ENST00000455359 BAGE2Q86Y30 109 aa10.32□□□□□ -0.76
HMGXB4-204ENST00000455359 C16orf74Q96GX8 76 aa10.32□□□□□ -0.76
HMGXB4-204ENST00000455359 IGHV1OR15-1A0A075B7D0 117 aa10.31□□□□□ -0.76
HMGXB4-204ENST00000455359 TEX48A0A1B0GUV7 120 aa10.31□□□□□ -0.76
HMGXB4-204ENST00000455359 GCGP01275 180 aa10.31□□□□□ -0.76
HMGXB4-204ENST00000455359 EIF4E3Q8N5X7 224 aaKnown RBP10.31□□□□□ -0.76
HMGXB4-204ENST00000455359 TMEM263Q8WUH6 116 aaKnown RBP10.31□□□□□ -0.76
HMGXB4-204ENST00000455359 PCNPQ8WW12 178 aaKnown RBP10.31□□□□□ -0.76
HMGXB4-204ENST00000455359 MLST8Q9BVC4 326 aa10.31□□□□□ -0.76
HMGXB4-204ENST00000455359 A0A0J9YWU9 116 aa10.3□□□□□ -0.76
HMGXB4-204ENST00000455359 FABP5P3A8MUU1 101 aa10.3□□□□□ -0.76
HMGXB4-204ENST00000455359 ZNF705GA8MUZ8 300 aaPredicted RBP10.3□□□□□ -0.76
HMGXB4-204ENST00000455359 GNG4P50150 75 aa10.3□□□□□ -0.76
HMGXB4-204ENST00000455359 FAM159AQ6UWV7 190 aa10.3□□□□□ -0.76
HMGXB4-204ENST00000455359 IL17DQ8TAD2 202 aa10.3□□□□□ -0.76
HMGXB4-204ENST00000455359 KCNS1Q96KK3 526 aa10.3□□□□□ -0.76
HMGXB4-204ENST00000455359 C8orf49Q96NF6 230 aa10.3□□□□□ -0.76
HMGXB4-204ENST00000455359 BIN3Q9NQY0 253 aa10.3□□□□□ -0.76
HMGXB4-204ENST00000455359 CBY3A6NI87 242 aa10.29□□□□□ -0.76
HMGXB4-204ENST00000455359 C9JCJ5 164 aa10.29□□□□□ -0.76
HMGXB4-204ENST00000455359 ZNF674Q2M3X9 581 aa10.29□□□□□ -0.76
HMGXB4-204ENST00000455359 CENPWQ5EE01 88 aa10.29□□□□□ -0.76
HMGXB4-204ENST00000455359 IBA57Q5T440 356 aaKnown RBP10.29□□□□□ -0.76
HMGXB4-204ENST00000455359 FAM162BQ5T6X4 162 aa10.29□□□□□ -0.76
HMGXB4-204ENST00000455359 RNASE8Q8TDE3 154 aaKnown RBP10.29□□□□□ -0.76
HMGXB4-204ENST00000455359 WWC2-AS2Q96NR7 200 aa10.29□□□□□ -0.76
HMGXB4-204ENST00000455359 DERL1Q9BUN8 251 aa10.29□□□□□ -0.76
HMGXB4-204ENST00000455359 TP53TG3Q9ULZ0 132 aa10.29□□□□□ -0.76
HMGXB4-204ENST00000455359 TRGV11A0A075B6L2 103 aa10.28□□□□□ -0.76
HMGXB4-204ENST00000455359 RAB19A4D1S5 217 aa10.28□□□□□ -0.76
HMGXB4-204ENST00000455359 SPART-AS1P0CW21 52 aa10.28□□□□□ -0.76
HMGXB4-204ENST00000455359 HTN1P15515 57 aa10.28□□□□□ -0.76
HMGXB4-204ENST00000455359 ZNF80P51504 273 aaPredicted RBP10.28□□□□□ -0.76
HMGXB4-204ENST00000455359 ZC2HC1AQ96GY0 325 aa10.28□□□□□ -0.76
HMGXB4-204ENST00000455359 SDF2L1Q9HCN8 221 aa10.28□□□□□ -0.76
HMGXB4-204ENST00000455359 LYRM9A8MSI8 78 aa10.27□□□□□ -0.77
HMGXB4-204ENST00000455359 SRP19P09132 144 aaKnown RBP10.27□□□□□ -0.77
HMGXB4-204ENST00000455359 AZU1P20160 251 aa10.27□□□□□ -0.77
HMGXB4-204ENST00000455359 DAZ2Q13117 558 aaKnown RBP10.27□□□□□ -0.77
HMGXB4-204ENST00000455359 FAM74A3Q4VXF1 159 aa10.27□□□□□ -0.77
HMGXB4-204ENST00000455359 PARLQ9H300 379 aa10.27□□□□□ -0.77
HMGXB4-204ENST00000455359 LY96Q9Y6Y9 160 aa10.27□□□□□ -0.77
HMGXB4-204ENST00000455359 CRIP1P50238 77 aa10.26□□□□□ -0.77
HMGXB4-204ENST00000455359 Q6ZQT7 251 aa10.26□□□□□ -0.77
HMGXB4-204ENST00000455359 C11orf45Q8TAV5 145 aa10.26□□□□□ -0.77
HMGXB4-204ENST00000455359 TIMM8BQ9Y5J9 83 aaPredicted RBP10.26□□□□□ -0.77
HMGXB4-204ENST00000455359 TRBV20OR9-2A0A075B6H5 130 aa10.25□□□□□ -0.77
HMGXB4-204ENST00000455359 PLAC8L1A1L4L8 177 aa10.25□□□□□ -0.77
HMGXB4-204ENST00000455359 CXorf65A6NEN9 183 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms