RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 CSNK1G2-AS1Q8NCQ2 148 aa8.23□□□□□ -1.09
TRAF4-206ENST00000454852 SMIM7Q9BQ49 75 aa8.23□□□□□ -1.09
TRAF4-206ENST00000454852 IGKV3-20P01619 116 aa8.22□□□□□ -1.09
TRAF4-206ENST00000454852 FRMD6-AS1P0C7T7 363 aa8.22□□□□□ -1.09
TRAF4-206ENST00000454852 RPL35AP18077 110 aaKnown RBP8.22□□□□□ -1.09
TRAF4-206ENST00000454852 SPINK13Q1W4C9 94 aa8.22□□□□□ -1.09
TRAF4-206ENST00000454852 PRR9Q5T870 116 aa8.22□□□□□ -1.09
TRAF4-206ENST00000454852 GFI1BQ5VTD9 330 aa8.22□□□□□ -1.09
TRAF4-206ENST00000454852 SEC11CQ9BY50 192 aa8.22□□□□□ -1.09
TRAF4-206ENST00000454852 BIN3Q9NQY0 253 aa8.22□□□□□ -1.09
TRAF4-206ENST00000454852 NAT8Q9UHE5 227 aa8.22□□□□□ -1.09
TRAF4-206ENST00000454852 C7orf71A4D174 169 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 M0R2Z0 102 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 ZNF324O75467 553 aaPredicted RBP8.21□□□□□ -1.1
TRAF4-206ENST00000454852 GCGP01275 180 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 INSP01308 110 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 GPX1P07203 203 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 PFN1P07737 140 aaKnown RBP8.21□□□□□ -1.1
TRAF4-206ENST00000454852 ADCYAP1P18509 176 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 TMEM241Q24JQ0 296 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 ZNF674Q2M3X9 581 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 Q6ZWC4 215 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 LINC01551Q86U37 167 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 OCC1Q8TAD7 63 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 ZC2HC1AQ96GY0 325 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 C8orf49Q96NF6 230 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 ASCL2Q99929 193 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 LINC00467Q9BRT7 94 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 SDF2L1Q9HCN8 221 aa8.21□□□□□ -1.1
TRAF4-206ENST00000454852 CARHSP1Q9Y2V2 147 aaKnown RBP8.21□□□□□ -1.1
TRAF4-206ENST00000454852 TRAV21A0A0B4J279 112 aa8.2□□□□□ -1.1
TRAF4-206ENST00000454852 CA1P00915 261 aaPredicted RBP8.2□□□□□ -1.1
TRAF4-206ENST00000454852 PRB2P02812 416 aaPredicted RBP8.2□□□□□ -1.1
TRAF4-206ENST00000454852 CRIP1P50238 77 aa8.2□□□□□ -1.1
TRAF4-206ENST00000454852 ZNF80P51504 273 aaPredicted RBP8.2□□□□□ -1.1
TRAF4-206ENST00000454852 CEBPGP53567 150 aa8.2□□□□□ -1.1
TRAF4-206ENST00000454852 PNRC1Q12796 327 aaPredicted RBP8.2□□□□□ -1.1
TRAF4-206ENST00000454852 KIR3DS1Q14943 382 aa8.2□□□□□ -1.1
TRAF4-206ENST00000454852 TDRG1Q3Y452 100 aa8.2□□□□□ -1.1
TRAF4-206ENST00000454852 ZNF705AQ6ZN79 300 aaPredicted RBP8.2□□□□□ -1.1
TRAF4-206ENST00000454852 TMEM256Q8N2U0 113 aa8.2□□□□□ -1.1
TRAF4-206ENST00000454852 NIPSNAP3BQ9BS92 247 aa8.2□□□□□ -1.1
TRAF4-206ENST00000454852 TP53TG1Q9Y2A0 90 aa8.2□□□□□ -1.1
TRAF4-206ENST00000454852 DNAH9Q9NYC9 4486 aa8.19□□□□□ -1.1
TRAF4-206ENST00000454852 TRAV12-2A0A075B6T6 113 aa8.19□□□□□ -1.1
TRAF4-206ENST00000454852 C19orf71A6NCJ1 209 aa8.19□□□□□ -1.1
TRAF4-206ENST00000454852 PGPEP1LA6NFU8 196 aa8.19□□□□□ -1.1
TRAF4-206ENST00000454852 FABP5P3A8MUU1 101 aa8.19□□□□□ -1.1
TRAF4-206ENST00000454852 K7EN84 100 aa8.19□□□□□ -1.1
TRAF4-206ENST00000454852 RBMY1A1P0DJD3 496 aaKnown RBP8.19□□□□□ -1.1
TRAF4-206ENST00000454852 RBMY1CP0DJD4 496 aa8.19□□□□□ -1.1
TRAF4-206ENST00000454852 RPL23P62829 140 aaKnown RBP8.19□□□□□ -1.1
TRAF4-206ENST00000454852 BTN1A1Q13410 526 aa8.19□□□□□ -1.1
TRAF4-206ENST00000454852 RBMY1FQ15415 496 aaKnown RBP8.19□□□□□ -1.1
TRAF4-206ENST00000454852 FAM162BQ5T6X4 162 aa8.19□□□□□ -1.1
TRAF4-206ENST00000454852 FAM231DQ6ZW35 169 aa8.19□□□□□ -1.1
TRAF4-206ENST00000454852 C1orf158Q8N1D5 194 aa8.19□□□□□ -1.1
TRAF4-206ENST00000454852 XCL2Q9UBD3 114 aa8.19□□□□□ -1.1
TRAF4-206ENST00000454852 F8W036 122 aa8.18□□□□□ -1.1
TRAF4-206ENST00000454852 H7BYZ3 331 aa8.18□□□□□ -1.1
TRAF4-206ENST00000454852 RNASE4P34096 147 aaKnown RBP8.18□□□□□ -1.1
TRAF4-206ENST00000454852 FXYD7P58549 80 aa8.18□□□□□ -1.1
TRAF4-206ENST00000454852 NHLRC2Q8NBF2 726 aa8.18□□□□□ -1.1
TRAF4-206ENST00000454852 RNF183Q96D59 192 aa8.18□□□□□ -1.1
TRAF4-206ENST00000454852 NEU1Q99519 415 aa8.18□□□□□ -1.1
TRAF4-206ENST00000454852 PYGO2Q9BRQ0 406 aa8.18□□□□□ -1.1
TRAF4-206ENST00000454852 TRAV12-3A0A0B4J271 114 aa8.17□□□□□ -1.1
TRAF4-206ENST00000454852 SH2D1AO60880 128 aa8.17□□□□□ -1.1
TRAF4-206ENST00000454852 APOC3P02656 99 aa8.17□□□□□ -1.1
TRAF4-206ENST00000454852 LINC01559Q495D7 138 aa8.17□□□□□ -1.1
TRAF4-206ENST00000454852 MRAPQ8TCY5 172 aa8.17□□□□□ -1.1
TRAF4-206ENST00000454852 ISOC2Q96AB3 205 aa8.17□□□□□ -1.1
TRAF4-206ENST00000454852 TM2D3Q9BRN9 247 aa8.17□□□□□ -1.1
TRAF4-206ENST00000454852 OSTCQ9NRP0 149 aa8.17□□□□□ -1.1
TRAF4-206ENST00000454852 TP53TG3Q9ULZ0 132 aa8.17□□□□□ -1.1
TRAF4-206ENST00000454852 GOLT1BQ9Y3E0 138 aa8.17□□□□□ -1.1
TRAF4-206ENST00000454852 HUWE1Q7Z6Z7 4374 aaKnown RBP8.16□□□□□ -1.1
TRAF4-206ENST00000454852 SMIM9A6NGZ8 99 aa8.16□□□□□ -1.1
TRAF4-206ENST00000454852 CXCL1P09341 107 aa8.16□□□□□ -1.1
TRAF4-206ENST00000454852 MGST1P10620 155 aaKnown RBP8.16□□□□□ -1.1
TRAF4-206ENST00000454852 ANXA2RQ3ZCQ2 193 aa8.16□□□□□ -1.1
TRAF4-206ENST00000454852 DNLZQ5SXM8 178 aa8.16□□□□□ -1.1
TRAF4-206ENST00000454852 KCNS1Q96KK3 526 aa8.16□□□□□ -1.1
TRAF4-206ENST00000454852 RCHY1Q96PM5 261 aa8.16□□□□□ -1.1
TRAF4-206ENST00000454852 B9D2Q9BPU9 175 aa8.16□□□□□ -1.1
TRAF4-206ENST00000454852 C11orf21Q9P2W6 132 aa8.16□□□□□ -1.1
TRAF4-206ENST00000454852 IGHV1OR15-1A0A075B7D0 117 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 IGKV3D-20A0A0C4DH25 116 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 B4DEV8 164 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 J3KRW8 73 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 DEFA6Q01524 100 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 OR5I1Q13606 314 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 CT83Q5H943 113 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 DEFB121Q5J5C9 76 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 IBA57Q5T440 356 aaKnown RBP8.15□□□□□ -1.1
TRAF4-206ENST00000454852 Q6ZQT7 251 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 ZNF575Q86XF7 245 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 SBSPONQ8IVN8 264 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 SVBPQ8N300 66 aa8.15□□□□□ -1.1
TRAF4-206ENST00000454852 NUDT10Q8NFP7 164 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms