RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 GGTLC3B5MD39 225 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 HRASP01112 189 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 HES1Q14469 280 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 LINC00173Q6ZV60 143 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 OR5C1Q8NGR4 320 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 OR9G1Q8NH87 305 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 OSR1Q8TAX0 266 aaPredicted RBP5.95□□□□□ -1.46
BRCC3-208ENST00000453705 TMEM133Q9H2Q1 129 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 USF3Q68DE3 2245 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 TRAV5A0A0B4J249 113 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 C15orf62A8K5M9 175 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 NDUFB3O43676 98 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 IGLC1P0CG04 106 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 CRYBB3P26998 211 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 RBMY1FQ15415 496 aaKnown RBP5.95□□□□□ -1.46
BRCC3-208ENST00000453705 PRIMA1Q86XR5 153 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 C6orf223Q8N319 242 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 ITLN2Q8WWU7 325 aaPredicted RBP5.95□□□□□ -1.46
BRCC3-208ENST00000453705 ZNF714Q96N38 554 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 CCL13Q99616 98 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 WDR61Q9GZS3 305 aaKnown RBP5.95□□□□□ -1.46
BRCC3-208ENST00000453705 USP9XQ93008 2570 aaPredicted RBP5.95□□□□□ -1.46
BRCC3-208ENST00000453705 TENM4Q6N022 2769 aa5.95□□□□□ -1.46
BRCC3-208ENST00000453705 CYSRT1A8MQ03 144 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 K7EQD1 137 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 GYPAP02724 150 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 SAA2P0DJI9 122 aaPredicted RBP5.94□□□□□ -1.46
BRCC3-208ENST00000453705 HERVK_113P63121 156 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 PDPNQ86YL7 162 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 FAM216BQ8N7L0 139 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 Q8N976 141 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 OR2T10Q8NGZ9 312 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 CMTM2Q8TAZ6 248 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 MBD6Q96DN6 1003 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 BBC3Q96PG8 261 aaPredicted RBP5.94□□□□□ -1.46
BRCC3-208ENST00000453705 RNF5Q99942 180 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 FLNCQ14315 2725 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 NUPR1O60356 82 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 CA2P00918 260 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 CYP2G1PQ6ZSU1 146 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 TMEM256Q8N2U0 113 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 NPVFQ9HCQ7 196 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 DYNLRB1Q9NP97 96 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 CTSZQ9UBR2 303 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 PLCE1Q9P212 2302 aa5.94□□□□□ -1.46
BRCC3-208ENST00000453705 TRBV20-1A0A075B6N2 111 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 TRAV4A0A0B4J268 109 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 M0R1X1 148 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 DPM2O94777 84 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 BCL2P10415 239 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 ERVK-16P61578 105 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 SPATA45Q537H7 98 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 MORN5Q5VZ52 161 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 REG3GQ6UW15 175 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 CLEC19AQ6UXS0 136 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 LINC01560Q8TB33 94 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 POLEQ07864 2286 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 IGLV9-49A0A0B4J1Y8 123 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 TEX48A0A1B0GUV7 120 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 UPK2O00526 184 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 ISLRO14498 428 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 MT-ATP8P03928 68 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 TFF1P04155 84 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 PRB1P04280 392 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 IL3RAP26951 378 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 YPEL3P61236 119 aaPredicted RBP5.93□□□□□ -1.46
BRCC3-208ENST00000453705 ZNF816Q0VGE8 651 aaPredicted RBP5.93□□□□□ -1.46
BRCC3-208ENST00000453705 RTL8BQ17RB0 113 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 FOXI2Q6ZQN5 318 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 RNF185Q96GF1 192 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 PGLYRP4Q96LB8 373 aa5.93□□□□□ -1.46
BRCC3-208ENST00000453705 M0R1W7 72 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 FOXA3P55318 350 aaPredicted RBP5.92□□□□□ -1.46
BRCC3-208ENST00000453705 EDDM3BP56851 147 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 PRCDQ00LT1 54 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 TMEM167AQ8TBQ9 72 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 TMEM190Q8WZ59 177 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 TAF15Q92804 592 aaKnown RBP eCLIP5.92□□□□□ -1.46
BRCC3-208ENST00000453705 MANBALQ9NQG1 85 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 MSRB1Q9NZV6 116 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 CACNA1DQ01668 2161 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 CADP27708 2225 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 TLN1Q9Y490 2541 aaKnown RBP5.92□□□□□ -1.46
BRCC3-208ENST00000453705 IGHV3-43A0A0B4J1X8 118 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 IGLV1-47P01700 117 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 IGHV3-43DP0DP04 118 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 CCL8P80075 99 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 HOXA4Q00056 320 aaPredicted RBP5.92□□□□□ -1.46
BRCC3-208ENST00000453705 Q8N7P7 452 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 ZNF709Q8N972 641 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 DCANP1Q8TF63 244 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 CHCHD10Q8WYQ3 142 aaPredicted RBP5.92□□□□□ -1.46
BRCC3-208ENST00000453705 PAXXQ9BUH6 204 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 ZNF747Q9BV97 191 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 SAMD10Q9BYL1 202 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 ARL2-SNX15V9GYD0 113 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 IGHV3-64DA0A0J9YX35 117 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 H0Y9J4 135 aa5.92□□□□□ -1.46
BRCC3-208ENST00000453705 TAX1BP3O14907 124 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms