RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 UPK3BQ9BT76 320 aa11.9□□□□□ -0.5
TNFRSF4-202ENST00000453580 A0A1W2PPQ1 181 aa11.89□□□□□ -0.51
TNFRSF4-202ENST00000453580 DIRC3C9JPN6 131 aa11.89□□□□□ -0.51
TNFRSF4-202ENST00000453580 ST6GAL2Q96JF0 529 aa11.89□□□□□ -0.51
TNFRSF4-202ENST00000453580 MED28Q9H204 178 aa11.89□□□□□ -0.51
TNFRSF4-202ENST00000453580 KLF12Q9Y4X4 402 aa11.89□□□□□ -0.51
TNFRSF4-202ENST00000453580 TRGV11A0A075B6L2 103 aa11.88□□□□□ -0.51
TNFRSF4-202ENST00000453580 MBP02144 154 aa11.88□□□□□ -0.51
TNFRSF4-202ENST00000453580 FAM159AQ6UWV7 190 aa11.88□□□□□ -0.51
TNFRSF4-202ENST00000453580 SPXQ9BT56 116 aa11.88□□□□□ -0.51
TNFRSF4-202ENST00000453580 MRPS16Q9Y3D3 137 aaKnown RBP11.88□□□□□ -0.51
TNFRSF4-202ENST00000453580 ALG5Q9Y673 324 aa11.88□□□□□ -0.51
TNFRSF4-202ENST00000453580 SERTM2A0A1B0GWG4 89 aa11.87□□□□□ -0.51
TNFRSF4-202ENST00000453580 PGPA6NDG6 321 aa11.87□□□□□ -0.51
TNFRSF4-202ENST00000453580 Q6AWC8 147 aa11.87□□□□□ -0.51
TNFRSF4-202ENST00000453580 OR10G4Q8NGN3 311 aa11.87□□□□□ -0.51
TNFRSF4-202ENST00000453580 OR10G9Q8NGN4 311 aa11.87□□□□□ -0.51
TNFRSF4-202ENST00000453580 OR10G7Q8NGN6 311 aa11.87□□□□□ -0.51
TNFRSF4-202ENST00000453580 Q8TAT8 98 aa11.87□□□□□ -0.51
TNFRSF4-202ENST00000453580 HYLS1Q96M11 299 aa11.87□□□□□ -0.51
TNFRSF4-202ENST00000453580 PRO0255Q9UI72 69 aa11.87□□□□□ -0.51
TNFRSF4-202ENST00000453580 MUC4Q99102 2169 aa11.86□□□□□ -0.51
TNFRSF4-202ENST00000453580 DNAH10Q8IVF4 4471 aa11.86□□□□□ -0.51
TNFRSF4-202ENST00000453580 K7EQM0 130 aa11.86□□□□□ -0.51
TNFRSF4-202ENST00000453580 PAX4O43316 350 aa11.86□□□□□ -0.51
TNFRSF4-202ENST00000453580 SERF2P84101 59 aa11.86□□□□□ -0.51
TNFRSF4-202ENST00000453580 OR2G3Q8NGZ4 309 aa11.86□□□□□ -0.51
TNFRSF4-202ENST00000453580 PSMG3Q9BT73 122 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF4-202ENST00000453580 ICOSQ9Y6W8 199 aa11.86□□□□□ -0.51
TNFRSF4-202ENST00000453580 CDC34P49427 236 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF4-202ENST00000453580 ESRGQ1W209 222 aa11.85□□□□□ -0.51
TNFRSF4-202ENST00000453580 PRR9Q5T870 116 aa11.85□□□□□ -0.51
TNFRSF4-202ENST00000453580 AQP10Q96PS8 301 aa11.85□□□□□ -0.51
TNFRSF4-202ENST00000453580 NDFIP1Q9BT67 221 aa11.85□□□□□ -0.51
TNFRSF4-202ENST00000453580 WFDC1Q9HC57 220 aa11.85□□□□□ -0.51
TNFRSF4-202ENST00000453580 MRPL23Q16540 153 aaKnown RBP11.84□□□□□ -0.51
TNFRSF4-202ENST00000453580 TDRG1Q3Y452 100 aa11.84□□□□□ -0.51
TNFRSF4-202ENST00000453580 INO80EQ8NBZ0 244 aaPredicted RBP11.84□□□□□ -0.51
TNFRSF4-202ENST00000453580 VSIG2Q96IQ7 327 aa11.84□□□□□ -0.51
TNFRSF4-202ENST00000453580 KCNS1Q96KK3 526 aa11.84□□□□□ -0.51
TNFRSF4-202ENST00000453580 TP53TG3Q9ULZ0 132 aa11.84□□□□□ -0.51
TNFRSF4-202ENST00000453580 A0A096LPF7 62 aa11.83□□□□□ -0.52
TNFRSF4-202ENST00000453580 TRAV21A0A0B4J279 112 aa11.83□□□□□ -0.52
TNFRSF4-202ENST00000453580 RAB2AP61019 212 aa11.83□□□□□ -0.52
TNFRSF4-202ENST00000453580 MUC21Q5SSG8 566 aa11.83□□□□□ -0.52
TNFRSF4-202ENST00000453580 MRPL16Q9NX20 251 aaKnown RBP11.83□□□□□ -0.52
TNFRSF4-202ENST00000453580 RPH3ALQ9UNE2 315 aa11.83□□□□□ -0.52
TNFRSF4-202ENST00000453580 HHLA3Q9XRX5 114 aa11.83□□□□□ -0.52
TNFRSF4-202ENST00000453580 TRGV4A0A0C4DH28 118 aa11.82□□□□□ -0.52
TNFRSF4-202ENST00000453580 FBLL1A6NHQ2 334 aaKnown RBP11.82□□□□□ -0.52
TNFRSF4-202ENST00000453580 GIPP09681 153 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF4-202ENST00000453580 GOLT1AQ6ZVE7 132 aa11.82□□□□□ -0.52
TNFRSF4-202ENST00000453580 IQCF2Q8IXL9 164 aa11.82□□□□□ -0.52
TNFRSF4-202ENST00000453580 HSD17B11Q8NBQ5 300 aa11.82□□□□□ -0.52
TNFRSF4-202ENST00000453580 PCNPQ8WW12 178 aaKnown RBP11.82□□□□□ -0.52
TNFRSF4-202ENST00000453580 RASL10AQ92737 203 aa11.82□□□□□ -0.52
TNFRSF4-202ENST00000453580 TREM1Q9NP99 234 aa11.82□□□□□ -0.52
TNFRSF4-202ENST00000453580 TMEM167BQ9NRX6 74 aa11.82□□□□□ -0.52
TNFRSF4-202ENST00000453580 HECTD4Q9Y4D8 3996 aa11.81□□□□□ -0.52
TNFRSF4-202ENST00000453580 BORCS7-ASMTA0A0B4J1R7 106 aa11.81□□□□□ -0.52
TNFRSF4-202ENST00000453580 ORM1P02763 201 aa11.81□□□□□ -0.52
TNFRSF4-202ENST00000453580 STAG3L2P0CL84 134 aa11.81□□□□□ -0.52
TNFRSF4-202ENST00000453580 STAG3L3P0CL85 134 aa11.81□□□□□ -0.52
TNFRSF4-202ENST00000453580 ARL14EPLP0DKL9 152 aa11.81□□□□□ -0.52
TNFRSF4-202ENST00000453580 TMEM183BQ1AE95 376 aa11.81□□□□□ -0.52
TNFRSF4-202ENST00000453580 TMEM183AQ8IXX5 376 aa11.81□□□□□ -0.52
TNFRSF4-202ENST00000453580 C5orf17Q8NAS9 161 aa11.81□□□□□ -0.52
TNFRSF4-202ENST00000453580 TNFSF18Q9UNG2 199 aa11.81□□□□□ -0.52
TNFRSF4-202ENST00000453580 SIVA1O15304 175 aa11.8□□□□□ -0.52
TNFRSF4-202ENST00000453580 CXorf1O96002 111 aa11.8□□□□□ -0.52
TNFRSF4-202ENST00000453580 CRYBA4P53673 196 aa11.8□□□□□ -0.52
TNFRSF4-202ENST00000453580 NEGR1Q7Z3B1 354 aa11.8□□□□□ -0.52
TNFRSF4-202ENST00000453580 RAB24Q969Q5 203 aa11.8□□□□□ -0.52
TNFRSF4-202ENST00000453580 ACTR3CQ9C0K3 210 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF4-202ENST00000453580 SDF2L1Q9HCN8 221 aa11.8□□□□□ -0.52
TNFRSF4-202ENST00000453580 NAGKQ9UJ70 344 aa11.8□□□□□ -0.52
TNFRSF4-202ENST00000453580 TRAV9-2A0A087WT02 112 aa11.79□□□□□ -0.52
TNFRSF4-202ENST00000453580 K7EP13 123 aa11.79□□□□□ -0.52
TNFRSF4-202ENST00000453580 M0R2P5 195 aa11.79□□□□□ -0.52
TNFRSF4-202ENST00000453580 IGHV3-53P01767 116 aa11.79□□□□□ -0.52
TNFRSF4-202ENST00000453580 ATP6V0CP27449 155 aa11.79□□□□□ -0.52
TNFRSF4-202ENST00000453580 TNP2Q05952 138 aa11.79□□□□□ -0.52
TNFRSF4-202ENST00000453580 FHL2Q14192 279 aa11.79□□□□□ -0.52
TNFRSF4-202ENST00000453580 ZFP69Q49AA0 526 aa11.79□□□□□ -0.52
TNFRSF4-202ENST00000453580 SH2D6Q7Z4S9 175 aa11.79□□□□□ -0.52
TNFRSF4-202ENST00000453580 MDFICQ9P1T7 246 aa11.79□□□□□ -0.52
TNFRSF4-202ENST00000453580 CIDEAO60543 219 aa11.78□□□□□ -0.52
TNFRSF4-202ENST00000453580 GCHFRP30047 84 aa11.78□□□□□ -0.52
TNFRSF4-202ENST00000453580 SRIP30626 198 aa11.78□□□□□ -0.52
TNFRSF4-202ENST00000453580 Q6ZQT7 251 aa11.78□□□□□ -0.52
TNFRSF4-202ENST00000453580 SUN5Q8TC36 379 aa11.78□□□□□ -0.52
TNFRSF4-202ENST00000453580 C8orf49Q96NF6 230 aa11.78□□□□□ -0.52
TNFRSF4-202ENST00000453580 TXNDC17Q9BRA2 123 aa11.78□□□□□ -0.52
TNFRSF4-202ENST00000453580 BOLA1Q9Y3E2 137 aa11.78□□□□□ -0.52
TNFRSF4-202ENST00000453580 TRAV4A0A0B4J268 109 aa11.77□□□□□ -0.53
TNFRSF4-202ENST00000453580 C16orf90A8MZG2 172 aa11.77□□□□□ -0.53
TNFRSF4-202ENST00000453580 C9JCJ5 164 aa11.77□□□□□ -0.53
TNFRSF4-202ENST00000453580 TAAR5O14804 337 aa11.77□□□□□ -0.53
TNFRSF4-202ENST00000453580 HMGB3O15347 200 aaKnown RBP11.77□□□□□ -0.53
TNFRSF4-202ENST00000453580 TCRAP04437 139 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms