RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 A0A0G2JLM5 398 aa12.25□□□□□ -0.45
SNX17-204ENST00000453453 Q6ZVH6 145 aa12.25□□□□□ -0.45
SNX17-204ENST00000453453 LINC00305Q7Z4B0 112 aa12.25□□□□□ -0.45
SNX17-204ENST00000453453 MRPL36Q9P0J6 103 aaKnown RBP12.25□□□□□ -0.45
SNX17-204ENST00000453453 ZFHX3Q15911 3703 aa12.24□□□□□ -0.45
SNX17-204ENST00000453453 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.24□□□□□ -0.45
SNX17-204ENST00000453453 PGPA6NDG6 321 aa12.24□□□□□ -0.45
SNX17-204ENST00000453453 FCGR2BP31994 310 aaPredicted RBP12.24□□□□□ -0.45
SNX17-204ENST00000453453 GPR183P32249 361 aa12.24□□□□□ -0.45
SNX17-204ENST00000453453 FOXE3Q13461 319 aa12.24□□□□□ -0.45
SNX17-204ENST00000453453 Q6AWC8 147 aa12.24□□□□□ -0.45
SNX17-204ENST00000453453 TCF24Q7RTU0 167 aa12.24□□□□□ -0.45
SNX17-204ENST00000453453 OR1N2Q8NGR9 330 aa12.24□□□□□ -0.45
SNX17-204ENST00000453453 GTSF1Q8WW33 167 aa12.24□□□□□ -0.45
SNX17-204ENST00000453453 OTORQ9NRC9 128 aa12.24□□□□□ -0.45
SNX17-204ENST00000453453 TMEM14CQ9P0S9 112 aa12.24□□□□□ -0.45
SNX17-204ENST00000453453 S4R3C0 116 aa12.24□□□□□ -0.45
SNX17-204ENST00000453453 hDV102S1A0JD36 115 aa12.23□□□□□ -0.45
SNX17-204ENST00000453453 TCRAP04437 139 aa12.23□□□□□ -0.45
SNX17-204ENST00000453453 ELANEP08246 267 aa12.23□□□□□ -0.45
SNX17-204ENST00000453453 NBEAP1P0C6P0 100 aa12.23□□□□□ -0.45
SNX17-204ENST00000453453 GP9P14770 177 aa12.23□□□□□ -0.45
SNX17-204ENST00000453453 RAB9AP51151 201 aa12.23□□□□□ -0.45
SNX17-204ENST00000453453 RIGQ13278 110 aa12.23□□□□□ -0.45
SNX17-204ENST00000453453 ZNF502Q8TBZ5 544 aa12.23□□□□□ -0.45
SNX17-204ENST00000453453 ATP6V0BQ99437 205 aa12.23□□□□□ -0.45
SNX17-204ENST00000453453 C16orf95Q9H693 158 aa12.23□□□□□ -0.45
SNX17-204ENST00000453453 MUC21A0A0G2JKD1 596 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 MUC21A0A140T8X8 626 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 NDUFA7O95182 113 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 IGHV3-23P01764 117 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 APOHP02749 345 aaPredicted RBP12.22□□□□□ -0.45
SNX17-204ENST00000453453 IGLC1P0CG04 106 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 PSMB8P28062 276 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 GNG5P63218 68 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 PSMG4Q5JS54 123 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 MUC21Q5SSG8 566 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 Q86TA4 180 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 FN1P02751 2386 aaKnown RBP12.22□□□□□ -0.45
SNX17-204ENST00000453453 CSN1S1P47710 185 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 BPIFA4PQ86YQ2 179 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 PGLYRP4Q96LB8 373 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 VPS25Q9BRG1 176 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 RNF24Q9Y225 148 aa12.22□□□□□ -0.45
SNX17-204ENST00000453453 OR2T8A6NH00 312 aa12.21□□□□□ -0.46
SNX17-204ENST00000453453 PSG1P11464 419 aa12.21□□□□□ -0.46
SNX17-204ENST00000453453 PSG9Q00887 426 aa12.21□□□□□ -0.46
SNX17-204ENST00000453453 RNF151Q2KHN1 245 aa12.21□□□□□ -0.46
SNX17-204ENST00000453453 GTF2H5Q6ZYL4 71 aa12.21□□□□□ -0.46
SNX17-204ENST00000453453 KLK15Q9H2R5 256 aa12.21□□□□□ -0.46
SNX17-204ENST00000453453 SIVA1O15304 175 aa12.2□□□□□ -0.46
SNX17-204ENST00000453453 AMMECR1LQ6DCA0 310 aa12.2□□□□□ -0.46
SNX17-204ENST00000453453 OR4X2Q8NGF9 303 aa12.2□□□□□ -0.46
SNX17-204ENST00000453453 OR10AG1Q8NH19 301 aa12.2□□□□□ -0.46
SNX17-204ENST00000453453 Q9H3A6 140 aa12.2□□□□□ -0.46
SNX17-204ENST00000453453 A0A1B0GUT8 65 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 A6NDN8 102 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 H3BRM9 83 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 IGKV1-17P01599 117 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 CLEC19AQ6UXS0 136 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 LINC00173Q6ZV60 143 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 CCDC140Q96MF4 163 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 AP5S1Q9NUS5 200 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 F8W735 103 aaPredicted RBP12.19□□□□□ -0.46
SNX17-204ENST00000453453 CLEC3BP05452 202 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 TMEM97Q5BJF2 176 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 C10orf99Q6UWK7 81 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 LINC00322Q6ZN03 302 aaPredicted RBP12.19□□□□□ -0.46
SNX17-204ENST00000453453 LCNL1Q6ZST4 164 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 C2orf91Q6ZV80 131 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 RNF152Q8N8N0 203 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 OR9G4Q8NGQ1 327 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 ZNF747Q9BV97 191 aa12.19□□□□□ -0.46
SNX17-204ENST00000453453 IGHV3-11P01762 117 aa12.18□□□□□ -0.46
SNX17-204ENST00000453453 ARL3P36405 182 aa12.18□□□□□ -0.46
SNX17-204ENST00000453453 LGALS9BQ3B8N2 356 aa12.18□□□□□ -0.46
SNX17-204ENST00000453453 LGALS9CQ6DKI2 356 aa12.18□□□□□ -0.46
SNX17-204ENST00000453453 UFSP1Q6NVU6 142 aa12.18□□□□□ -0.46
SNX17-204ENST00000453453 TMEM75Q8N9X5 138 aa12.18□□□□□ -0.46
SNX17-204ENST00000453453 OR1B1Q8NGR6 318 aa12.18□□□□□ -0.46
SNX17-204ENST00000453453 LINC01006Q8NI28 216 aa12.18□□□□□ -0.46
SNX17-204ENST00000453453 GAGE12BA1L429 117 aa12.17□□□□□ -0.46
SNX17-204ENST00000453453 CBY3A6NI87 242 aa12.17□□□□□ -0.46
SNX17-204ENST00000453453 CTSGP08311 255 aa12.17□□□□□ -0.46
SNX17-204ENST00000453453 ZNF493Q6ZR52 646 aa12.17□□□□□ -0.46
SNX17-204ENST00000453453 FA2HQ7L5A8 372 aa12.17□□□□□ -0.46
SNX17-204ENST00000453453 LYPD1Q8N2G4 141 aa12.17□□□□□ -0.46
SNX17-204ENST00000453453 ZNF491Q8N8L2 437 aa12.17□□□□□ -0.46
SNX17-204ENST00000453453 BLNKQ8WV28 456 aa12.17□□□□□ -0.46
SNX17-204ENST00000453453 CSTL1Q9H114 145 aa12.17□□□□□ -0.46
SNX17-204ENST00000453453 HIGD1AQ9Y241 93 aa12.17□□□□□ -0.46
SNX17-204ENST00000453453 C7orf71A4D174 169 aa12.16□□□□□ -0.46
SNX17-204ENST00000453453 M0QZ24 198 aa12.16□□□□□ -0.46
SNX17-204ENST00000453453 LYZP61626 148 aa12.16□□□□□ -0.46
SNX17-204ENST00000453453 HSD52Q0P140 79 aa12.16□□□□□ -0.46
SNX17-204ENST00000453453 S100A7AQ86SG5 101 aa12.16□□□□□ -0.46
SNX17-204ENST00000453453 MYOZ3Q8TDC0 251 aa12.16□□□□□ -0.46
SNX17-204ENST00000453453 UBE2E2Q96LR5 201 aa12.16□□□□□ -0.46
SNX17-204ENST00000453453 CLPSL1A2RUU4 121 aa12.15□□□□□ -0.46
SNX17-204ENST00000453453 C9orf118A6NHY6 69 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms