RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 ZC2HC1AQ96GY0 325 aa9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 SFRP2Q96HF1 295 aa9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 CTDSP1Q9GZU7 261 aa9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 RPS10P5Q9NQ39 176 aa9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 OSTCQ9NRP0 149 aa9.27□□□□□ -0.93
HLA-DPA1-244ENST00000453337 A0A087WWC5 75 aa9.26□□□□□ -0.93
HLA-DPA1-244ENST00000453337 AMBPP02760 352 aa9.26□□□□□ -0.93
HLA-DPA1-244ENST00000453337 CDKN1BP46527 198 aa9.26□□□□□ -0.93
HLA-DPA1-244ENST00000453337 EGFEM1PQ0D2K5 195 aa9.26□□□□□ -0.93
HLA-DPA1-244ENST00000453337 RNF212Q495C1 297 aa9.26□□□□□ -0.93
HLA-DPA1-244ENST00000453337 IBA57Q5T440 356 aaKnown RBP9.26□□□□□ -0.93
HLA-DPA1-244ENST00000453337 FAM162BQ5T6X4 162 aa9.26□□□□□ -0.93
HLA-DPA1-244ENST00000453337 AMTNQ6UX39 209 aa9.26□□□□□ -0.93
HLA-DPA1-244ENST00000453337 ZFAND2AQ8N6M9 145 aa9.26□□□□□ -0.93
HLA-DPA1-244ENST00000453337 C19orf71A6NCJ1 209 aa9.25□□□□□ -0.93
HLA-DPA1-244ENST00000453337 GATCO43716 136 aaKnown RBP9.25□□□□□ -0.93
HLA-DPA1-244ENST00000453337 RNASE4P34096 147 aaKnown RBP9.25□□□□□ -0.93
HLA-DPA1-244ENST00000453337 CRIP1P50238 77 aa9.25□□□□□ -0.93
HLA-DPA1-244ENST00000453337 TRPT1Q86TN4 253 aaKnown RBP9.25□□□□□ -0.93
HLA-DPA1-244ENST00000453337 Q8N1Y9 231 aa9.25□□□□□ -0.93
HLA-DPA1-244ENST00000453337 NUDT10Q8NFP7 164 aa9.25□□□□□ -0.93
HLA-DPA1-244ENST00000453337 NUDT11Q96G61 164 aa9.25□□□□□ -0.93
HLA-DPA1-244ENST00000453337 TMEM242Q9NWH2 141 aa9.25□□□□□ -0.93
HLA-DPA1-244ENST00000453337 TRAV21A0A0B4J279 112 aa9.24□□□□□ -0.93
HLA-DPA1-244ENST00000453337 KLLNB2CW77 178 aa9.24□□□□□ -0.93
HLA-DPA1-244ENST00000453337 H7BYZ3 331 aa9.24□□□□□ -0.93
HLA-DPA1-244ENST00000453337 P01737 135 aa9.24□□□□□ -0.93
HLA-DPA1-244ENST00000453337 PFN1P07737 140 aaKnown RBP9.24□□□□□ -0.93
HLA-DPA1-244ENST00000453337 DEFB125Q8N687 156 aa9.24□□□□□ -0.93
HLA-DPA1-244ENST00000453337 RNASE7Q9H1E1 156 aaKnown RBP9.24□□□□□ -0.93
HLA-DPA1-244ENST00000453337 C7orf71A4D174 169 aa9.23□□□□□ -0.93
HLA-DPA1-244ENST00000453337 ZNF705GA8MUZ8 300 aaPredicted RBP9.23□□□□□ -0.93
HLA-DPA1-244ENST00000453337 J3KRW8 73 aa9.23□□□□□ -0.93
HLA-DPA1-244ENST00000453337 SH2D1AO60880 128 aa9.23□□□□□ -0.93
HLA-DPA1-244ENST00000453337 ZNF80P51504 273 aaPredicted RBP9.23□□□□□ -0.93
HLA-DPA1-244ENST00000453337 SPINK13Q1W4C9 94 aa9.23□□□□□ -0.93
HLA-DPA1-244ENST00000453337 SAMD5Q5TGI4 173 aa9.23□□□□□ -0.93
HLA-DPA1-244ENST00000453337 Q6AWC8 147 aa9.23□□□□□ -0.93
HLA-DPA1-244ENST00000453337 MORN3Q6PF18 240 aaPredicted RBP9.23□□□□□ -0.93
HLA-DPA1-244ENST00000453337 ATRAIDQ6UW56 229 aa9.23□□□□□ -0.93
HLA-DPA1-244ENST00000453337 LINC00322Q6ZN03 302 aaPredicted RBP9.23□□□□□ -0.93
HLA-DPA1-244ENST00000453337 XKRY2A2RUG3 117 aa9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 CXorf65A6NEN9 183 aa9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 A8MWL6 223 aa9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 G3V4G9 280 aa9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 M0R2Z0 102 aa9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 ORM1P02763 201 aa9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 KRTAP10-11P60412 298 aa9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 RPS20P60866 119 aaKnown RBP9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 C1QTNF4Q9BXJ3 329 aa9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 WFDC10AQ9H1F0 79 aa9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 RPP21Q9H633 154 aaKnown RBP9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 TUBA4BQ9H853 241 aa9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 SRD5A3Q9H8P0 318 aa9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 V9GYV3 84 aa9.22□□□□□ -0.93
HLA-DPA1-244ENST00000453337 TRAV12-3A0A0B4J271 114 aa9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 TMEM189A5PLL7 270 aa9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 RBMY1BA6NDE4 496 aaKnown RBP9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 RBMY1EA6NEQ0 496 aaKnown RBP9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 RBMY1DP0C7P1 496 aaKnown RBP9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 FXYD7P58549 80 aa9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 BTN1A1Q13410 526 aa9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 CT83Q5H943 113 aa9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 PRR9Q5T870 116 aa9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 OR2D3Q8NGH3 330 aa9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 IMMP2LQ96T52 175 aa9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 C20orf144Q9BQM9 153 aa9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 SMCO4Q9NRQ5 59 aa9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 PKD1L1Q8TDX9 2849 aa9.21□□□□□ -0.94
HLA-DPA1-244ENST00000453337 TRAV12-2A0A075B6T6 113 aa9.2□□□□□ -0.94
HLA-DPA1-244ENST00000453337 LOC102724200A0A096LPH7 203 aaPredicted RBP9.2□□□□□ -0.94
HLA-DPA1-244ENST00000453337 ZNF324O75467 553 aaPredicted RBP9.2□□□□□ -0.94
HLA-DPA1-244ENST00000453337 RPL35AP18077 110 aaKnown RBP9.2□□□□□ -0.94
HLA-DPA1-244ENST00000453337 S100PP25815 95 aa9.2□□□□□ -0.94
HLA-DPA1-244ENST00000453337 KIR3DS1Q14943 382 aa9.2□□□□□ -0.94
HLA-DPA1-244ENST00000453337 GFI1BQ5VTD9 330 aa9.2□□□□□ -0.94
HLA-DPA1-244ENST00000453337 CSTL1Q9H114 145 aa9.2□□□□□ -0.94
HLA-DPA1-244ENST00000453337 TRRAPQ9Y4A5 3859 aa9.19□□□□□ -0.94
HLA-DPA1-244ENST00000453337 FAM231BA6NCW3 169 aa9.19□□□□□ -0.94
HLA-DPA1-244ENST00000453337 CRXO43186 299 aaPredicted RBP9.19□□□□□ -0.94
HLA-DPA1-244ENST00000453337 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
HLA-DPA1-244ENST00000453337 FAM159AQ6UWV7 190 aa9.19□□□□□ -0.94
HLA-DPA1-244ENST00000453337 TSKUQ8WUA8 353 aa9.19□□□□□ -0.94
HLA-DPA1-244ENST00000453337 KCNS1Q96KK3 526 aa9.19□□□□□ -0.94
HLA-DPA1-244ENST00000453337 IL36BQ9NZH7 164 aa9.19□□□□□ -0.94
HLA-DPA1-244ENST00000453337 XCL2Q9UBD3 114 aa9.19□□□□□ -0.94
HLA-DPA1-244ENST00000453337 KIR2DL5BA0A0G2JN68 375 aa9.18□□□□□ -0.94
HLA-DPA1-244ENST00000453337 KIR2DL5BA0A0G2JPC4 375 aa9.18□□□□□ -0.94
HLA-DPA1-244ENST00000453337 INSP01308 110 aa9.18□□□□□ -0.94
HLA-DPA1-244ENST00000453337 APOC4P55056 127 aa9.18□□□□□ -0.94
HLA-DPA1-244ENST00000453337 KCNIP4Q6PIL6 250 aa9.18□□□□□ -0.94
HLA-DPA1-244ENST00000453337 KIR2DL5AQ8N109 375 aa9.18□□□□□ -0.94
HLA-DPA1-244ENST00000453337 TMEM256Q8N2U0 113 aa9.18□□□□□ -0.94
HLA-DPA1-244ENST00000453337 KIR2DL5BQ8NHK3 375 aa9.18□□□□□ -0.94
HLA-DPA1-244ENST00000453337 GFRA4Q9GZZ7 299 aa9.18□□□□□ -0.94
HLA-DPA1-244ENST00000453337 IGKV3D-20A0A0C4DH25 116 aa9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 SMIM27A0A1W2PRY6 76 aa9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 A8MZ25 164 aa9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 CXCL1P09341 107 aa9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 IGHV4-30-4P0DP06 118 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms