RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 EXOC3-AS1Q8N2X6 119 aa7.43□□□□□ -1.22
USP1-204ENST00000452143 NUDT15Q9NV35 164 aa7.43□□□□□ -1.22
USP1-204ENST00000452143 HHLA3Q9XRX5 114 aa7.43□□□□□ -1.22
USP1-204ENST00000452143 MYCBP2O75592 4640 aa7.43□□□□□ -1.22
USP1-204ENST00000452143 VPS13BQ7Z7G8 4022 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 TRAV6A0A075B6T7 132 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 TRAV9-2A0A087WT02 112 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 IGKV2-40A0A087WW87 121 aaPredicted RBP7.42□□□□□ -1.22
USP1-204ENST00000452143 PLA2G10O15496 165 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 IGKV2D-40P01614 121 aaPredicted RBP7.42□□□□□ -1.22
USP1-204ENST00000452143 IL15RAQ13261 267 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 RAB32Q13637 225 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 ICAM4Q14773 271 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 PRR9Q5T870 116 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 LYPD5Q6UWN5 251 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 NEGR1Q7Z3B1 354 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 LYPD1Q8N2G4 141 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 BLNKQ8WV28 456 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 SLC25A2Q9BXI2 301 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 GPN1Q9HCN4 374 aaPredicted RBP7.42□□□□□ -1.22
USP1-204ENST00000452143 KCNIP2Q9NS61 270 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 MRPL16Q9NX20 251 aaKnown RBP7.42□□□□□ -1.22
USP1-204ENST00000452143 ZNF492Q9P255 531 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 LY96Q9Y6Y9 160 aa7.42□□□□□ -1.22
USP1-204ENST00000452143 IGHV3-53P01767 116 aa7.41□□□□□ -1.22
USP1-204ENST00000452143 ZNF138P52744 262 aa7.41□□□□□ -1.22
USP1-204ENST00000452143 FHL2Q14192 279 aa7.41□□□□□ -1.22
USP1-204ENST00000452143 GCSAMLQ5JQS6 135 aa7.41□□□□□ -1.22
USP1-204ENST00000452143 FAM122CQ6P4D5 195 aa7.41□□□□□ -1.22
USP1-204ENST00000452143 FAM167A-AS1Q96KT0 104 aa7.41□□□□□ -1.22
USP1-204ENST00000452143 SEC22CQ9BRL7 303 aa7.41□□□□□ -1.22
USP1-204ENST00000452143 MRPL32Q9BYC8 188 aaKnown RBP7.41□□□□□ -1.22
USP1-204ENST00000452143 TP53TG3Q9ULZ0 132 aa7.41□□□□□ -1.22
USP1-204ENST00000452143 A0A087WTM6 91 aa7.4□□□□□ -1.22
USP1-204ENST00000452143 RBAKDNA6NC62 111 aa7.4□□□□□ -1.22
USP1-204ENST00000452143 IFNA5P01569 189 aa7.4□□□□□ -1.22
USP1-204ENST00000452143 ORM1P02763 201 aa7.4□□□□□ -1.22
USP1-204ENST00000452143 NBEAP1P0C6P0 100 aa7.4□□□□□ -1.22
USP1-204ENST00000452143 SRIP30626 198 aa7.4□□□□□ -1.22
USP1-204ENST00000452143 XGP55808 180 aa7.4□□□□□ -1.22
USP1-204ENST00000452143 IQCF2Q8IXL9 164 aa7.4□□□□□ -1.22
USP1-204ENST00000452143 Q8TAT8 98 aa7.4□□□□□ -1.22
USP1-204ENST00000452143 PCNPQ8WW12 178 aaKnown RBP7.4□□□□□ -1.22
USP1-204ENST00000452143 FRZBQ92765 325 aa7.4□□□□□ -1.22
USP1-204ENST00000452143 C8orf49Q96NF6 230 aa7.4□□□□□ -1.22
USP1-204ENST00000452143 OR51M1Q9H341 326 aa7.4□□□□□ -1.22
USP1-204ENST00000452143 TRGV4A0A0C4DH28 118 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 K7EQD1 137 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 PRAF2O60831 178 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 DNAH10OSP0CZ25 163 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 INAFM2P0DMQ5 153 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 EVI2AP22794 236 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 CSN1S1P47710 185 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 ZNF266Q14584 549 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 Q5VSD8 79 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 MIR17HGQ75NE6 70 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 C10orf126Q8N4M7 172 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 OR10G4Q8NGN3 311 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 OR5C1Q8NGR4 320 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 RASL10AQ92737 203 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 FXYD5Q96DB9 178 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 PHYHIPLQ96FC7 376 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 PAXXQ9BUH6 204 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 MSRB1Q9NZV6 116 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 LENEPQ9Y5L5 61 aa7.39□□□□□ -1.23
USP1-204ENST00000452143 TRGV11A0A075B6L2 103 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 C9JCJ5 164 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 H2AFB2P0C5Z0 115 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 OR10J4P0C629 311 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 Q6AWC8 147 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 Q6ZQT7 251 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 WFDC10BQ8IUB3 73 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 THAP6Q8TBB0 222 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 TXNDC17Q9BRA2 123 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 SPXQ9BT56 116 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 CCDC32Q9BV29 185 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 SLC25A31Q9H0C2 315 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 TNFRSF18Q9Y5U5 241 aa7.38□□□□□ -1.23
USP1-204ENST00000452143 FLG2Q5D862 2391 aaPredicted RBP7.38□□□□□ -1.23
USP1-204ENST00000452143 E5RGE8 158 aa7.37□□□□□ -1.23
USP1-204ENST00000452143 C17orf112F2Z3M2 114 aa7.37□□□□□ -1.23
USP1-204ENST00000452143 OR7C2O60412 319 aa7.37□□□□□ -1.23
USP1-204ENST00000452143 GYPEP15421 78 aa7.37□□□□□ -1.23
USP1-204ENST00000452143 NHLH2Q02577 135 aa7.37□□□□□ -1.23
USP1-204ENST00000452143 MUC21Q5SSG8 566 aa7.37□□□□□ -1.23
USP1-204ENST00000452143 FAM159AQ6UWV7 190 aa7.37□□□□□ -1.23
USP1-204ENST00000452143 TMED6Q8WW62 240 aa7.37□□□□□ -1.23
USP1-204ENST00000452143 ZNF479Q96JC4 524 aa7.37□□□□□ -1.23
USP1-204ENST00000452143 WDR61Q9GZS3 305 aaKnown RBP7.37□□□□□ -1.23
USP1-204ENST00000452143 MDFICQ9P1T7 246 aa7.37□□□□□ -1.23
USP1-204ENST00000452143 TRAV4A0A0B4J268 109 aa7.36□□□□□ -1.23
USP1-204ENST00000452143 FAM240BA0A1B0GVZ2 78 aa7.36□□□□□ -1.23
USP1-204ENST00000452143 SFTA3P0C7M3 94 aa7.36□□□□□ -1.23
USP1-204ENST00000452143 FUSP35637 526 aaKnown RBP eCLIP7.36□□□□□ -1.23
USP1-204ENST00000452143 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
USP1-204ENST00000452143 UBE2L3P68036 154 aaKnown RBP7.36□□□□□ -1.23
USP1-204ENST00000452143 TMEM183BQ1AE95 376 aa7.36□□□□□ -1.23
USP1-204ENST00000452143 TDRG1Q3Y452 100 aa7.36□□□□□ -1.23
USP1-204ENST00000452143 SH2D6Q7Z4S9 175 aa7.36□□□□□ -1.23
USP1-204ENST00000452143 TMEM183AQ8IXX5 376 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms