RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TCL1AP56279 114 aa8.66□□□□□ -1.02
CPSF4-208ENST00000452047 UBE2L3P68036 154 aaKnown RBP8.66□□□□□ -1.02
CPSF4-208ENST00000452047 IBA57Q5T440 356 aaKnown RBP8.66□□□□□ -1.02
CPSF4-208ENST00000452047 LYPD1Q8N2G4 141 aa8.66□□□□□ -1.02
CPSF4-208ENST00000452047 Q9H3A6 140 aa8.66□□□□□ -1.02
CPSF4-208ENST00000452047 WFDC1Q9HC57 220 aa8.66□□□□□ -1.02
CPSF4-208ENST00000452047 KLF12Q9Y4X4 402 aa8.66□□□□□ -1.02
CPSF4-208ENST00000452047 SPINK4O60575 86 aa8.65□□□□□ -1.02
CPSF4-208ENST00000452047 IFNA5P01569 189 aa8.65□□□□□ -1.02
CPSF4-208ENST00000452047 RANP62826 216 aaKnown RBP8.65□□□□□ -1.02
CPSF4-208ENST00000452047 KHDC3LQ587J8 217 aa8.65□□□□□ -1.02
CPSF4-208ENST00000452047 SCGB1C1Q8TD33 95 aa8.65□□□□□ -1.02
CPSF4-208ENST00000452047 MED28Q9H204 178 aa8.65□□□□□ -1.02
CPSF4-208ENST00000452047 TP53TG3Q9ULZ0 132 aa8.65□□□□□ -1.02
CPSF4-208ENST00000452047 TRGV2A0A075B6R0 118 aa8.64□□□□□ -1.03
CPSF4-208ENST00000452047 IGHV1OR15-1A0A075B7D0 117 aa8.64□□□□□ -1.03
CPSF4-208ENST00000452047 TRGV1A0A0A0MS02 117 aa8.64□□□□□ -1.03
CPSF4-208ENST00000452047 EIF3GO75821 320 aaKnown RBP eCLIP8.64□□□□□ -1.03
CPSF4-208ENST00000452047 CSN1S1P47710 185 aa8.64□□□□□ -1.03
CPSF4-208ENST00000452047 TAS2R45P59539 299 aa8.64□□□□□ -1.03
CPSF4-208ENST00000452047 VSIG2Q96IQ7 327 aa8.64□□□□□ -1.03
CPSF4-208ENST00000452047 UPK3BQ9BT76 320 aa8.64□□□□□ -1.03
CPSF4-208ENST00000452047 A0A096LPF7 62 aa8.63□□□□□ -1.03
CPSF4-208ENST00000452047 DIRC3C9JPN6 131 aa8.63□□□□□ -1.03
CPSF4-208ENST00000452047 MED14OSP0DP75 135 aa8.63□□□□□ -1.03
CPSF4-208ENST00000452047 ZNF266Q14584 549 aa8.63□□□□□ -1.03
CPSF4-208ENST00000452047 ESRGQ1W209 222 aa8.63□□□□□ -1.03
CPSF4-208ENST00000452047 SLC7A5P1Q8MH63 180 aa8.63□□□□□ -1.03
CPSF4-208ENST00000452047 C6orf223Q8N319 242 aa8.63□□□□□ -1.03
CPSF4-208ENST00000452047 KRTAP1-5Q9BYS1 174 aa8.63□□□□□ -1.03
CPSF4-208ENST00000452047 Q9H8V8 135 aa8.63□□□□□ -1.03
CPSF4-208ENST00000452047 LENEPQ9Y5L5 61 aa8.63□□□□□ -1.03
CPSF4-208ENST00000452047 PCLOQ9Y6V0 5065 aa8.62□□□□□ -1.03
CPSF4-208ENST00000452047 TNP2Q05952 138 aa8.62□□□□□ -1.03
CPSF4-208ENST00000452047 Q6AWC8 147 aa8.62□□□□□ -1.03
CPSF4-208ENST00000452047 PQLC2Q6ZP29 291 aa8.62□□□□□ -1.03
CPSF4-208ENST00000452047 TMED6Q8WW62 240 aa8.62□□□□□ -1.03
CPSF4-208ENST00000452047 OTORQ9NRC9 128 aa8.62□□□□□ -1.03
CPSF4-208ENST00000452047 MRPS16Q9Y3D3 137 aaKnown RBP8.62□□□□□ -1.03
CPSF4-208ENST00000452047 RAB2AP61019 212 aa8.61□□□□□ -1.03
CPSF4-208ENST00000452047 ZNF415Q09FC8 603 aa8.61□□□□□ -1.03
CPSF4-208ENST00000452047 ACOT6Q3I5F7 207 aaPredicted RBP8.61□□□□□ -1.03
CPSF4-208ENST00000452047 ZNF575Q86XF7 245 aa8.61□□□□□ -1.03
CPSF4-208ENST00000452047 ARPC5LQ9BPX5 153 aa8.61□□□□□ -1.03
CPSF4-208ENST00000452047 MRPL16Q9NX20 251 aaKnown RBP8.61□□□□□ -1.03
CPSF4-208ENST00000452047 PGPA6NDG6 321 aa8.6□□□□□ -1.03
CPSF4-208ENST00000452047 Q5BKY6 102 aa8.6□□□□□ -1.03
CPSF4-208ENST00000452047 TTC32Q5I0X7 151 aa8.6□□□□□ -1.03
CPSF4-208ENST00000452047 MUC21Q5SSG8 566 aa8.6□□□□□ -1.03
CPSF4-208ENST00000452047 C9orf62Q8N4C0 152 aa8.6□□□□□ -1.03
CPSF4-208ENST00000452047 AQP10Q96PS8 301 aa8.6□□□□□ -1.03
CPSF4-208ENST00000452047 MDFICQ9P1T7 246 aa8.6□□□□□ -1.03
CPSF4-208ENST00000452047 A0A1W2PPV4 95 aa8.59□□□□□ -1.03
CPSF4-208ENST00000452047 HMGB3O15347 200 aaKnown RBP8.59□□□□□ -1.03
CPSF4-208ENST00000452047 IGHV3-53P01767 116 aa8.59□□□□□ -1.03
CPSF4-208ENST00000452047 TDRG1Q3Y452 100 aa8.59□□□□□ -1.03
CPSF4-208ENST00000452047 ARL6IP6Q8N6S5 226 aa8.59□□□□□ -1.03
CPSF4-208ENST00000452047 OR10G4Q8NGN3 311 aa8.59□□□□□ -1.03
CPSF4-208ENST00000452047 OR10G9Q8NGN4 311 aa8.59□□□□□ -1.03
CPSF4-208ENST00000452047 OR10G7Q8NGN6 311 aa8.59□□□□□ -1.03
CPSF4-208ENST00000452047 OR2G3Q8NGZ4 309 aa8.59□□□□□ -1.03
CPSF4-208ENST00000452047 CMTM2Q8TAZ6 248 aa8.59□□□□□ -1.03
CPSF4-208ENST00000452047 ASB13Q8WXK3 278 aa8.59□□□□□ -1.03
CPSF4-208ENST00000452047 BOLA1Q9Y3E2 137 aa8.59□□□□□ -1.03
CPSF4-208ENST00000452047 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.03
CPSF4-208ENST00000452047 A0A1W2PPQ1 181 aa8.58□□□□□ -1.04
CPSF4-208ENST00000452047 ARL14EPLP0DKL9 152 aa8.58□□□□□ -1.04
CPSF4-208ENST00000452047 CRYBA4P53673 196 aa8.58□□□□□ -1.04
CPSF4-208ENST00000452047 FHL2Q14192 279 aa8.58□□□□□ -1.04
CPSF4-208ENST00000452047 FAM74A1Q5RGS3 127 aa8.58□□□□□ -1.04
CPSF4-208ENST00000452047 GOLT1AQ6ZVE7 132 aa8.58□□□□□ -1.04
CPSF4-208ENST00000452047 HSD17B11Q8NBQ5 300 aa8.58□□□□□ -1.04
CPSF4-208ENST00000452047 TVP23CQ96ET8 276 aa8.58□□□□□ -1.04
CPSF4-208ENST00000452047 PSMG3Q9BT73 122 aaPredicted RBP8.58□□□□□ -1.04
CPSF4-208ENST00000452047 PRO0255Q9UI72 69 aa8.58□□□□□ -1.04
CPSF4-208ENST00000452047 RPH3ALQ9UNE2 315 aa8.58□□□□□ -1.04
CPSF4-208ENST00000452047 HSPG2P98160 4391 aa8.58□□□□□ -1.04
CPSF4-208ENST00000452047 RYR1P21817 5038 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 TRAV8-1A0A0A6YYK1 113 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 PAX4O43316 350 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 STAG3L2P0CL84 134 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 STAG3L3P0CL85 134 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 ATP6V0CP27449 155 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 CDC34P49427 236 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-208ENST00000452047 GNG5P63218 68 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 TMEM183BQ1AE95 376 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 FAM159AQ6UWV7 190 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 TMEM183AQ8IXX5 376 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 SUN5Q8TC36 379 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 RASL10AQ92737 203 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 ICOSQ9Y6W8 199 aa8.57□□□□□ -1.04
CPSF4-208ENST00000452047 TRGV11A0A075B6L2 103 aa8.56□□□□□ -1.04
CPSF4-208ENST00000452047 GIPP09681 153 aaPredicted RBP8.56□□□□□ -1.04
CPSF4-208ENST00000452047 SLAQ13239 276 aa8.56□□□□□ -1.04
CPSF4-208ENST00000452047 RAB24Q969Q5 203 aa8.56□□□□□ -1.04
CPSF4-208ENST00000452047 C8orf49Q96NF6 230 aa8.56□□□□□ -1.04
CPSF4-208ENST00000452047 SPXQ9BT56 116 aa8.56□□□□□ -1.04
CPSF4-208ENST00000452047 HHLA3Q9XRX5 114 aa8.56□□□□□ -1.04
CPSF4-208ENST00000452047 TRAV21A0A0B4J279 112 aa8.55□□□□□ -1.04
CPSF4-208ENST00000452047 IGHV3-16A0A0C4DH30 117 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms