RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 AVPP01185 164 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 FAM3BP58499 235 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 GOLT1AQ6ZVE7 132 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 SPTSSBQ8NFR3 76 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 NAT8Q9UHE5 227 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 SMPXQ9UHP9 88 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 A0A1W2PPI3 338 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 RPS20P60866 119 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 DIAPH2-AS1Q14236 149 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 SMIM7Q9BQ49 75 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 SPANXCQ9NY87 97 aa4.4□□□□□ -1.71
CDC42BPA-209ENST00000448940 GAGE12JA6NER3 117 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 IGLV1-47P01700 117 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 EWSR1Q01844 656 aaKnown RBP eCLIP4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 GAGE1Q13065 139 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 GAGE4Q13068 117 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 GAGE5Q13069 117 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 FHL1Q13642 323 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 GAGE13Q4V321 117 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 hDV102S1A0JD36 115 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 FGF8P55075 233 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 C2orf83Q53S99 150 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 THAP8Q8NA92 274 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 OR8A1Q8NGG7 326 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 IGHG4P01861 327 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 GATA2P23769 480 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 RIGQ13278 110 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 FUT9Q9Y231 359 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 CTXND1A0A1B0GTU2 59 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 CRYGDP07320 174 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 RPS11P62280 158 aaKnown RBP eCLIP4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 CIRBPQ14011 172 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 GCSAMLQ5JQS6 135 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 ZNF506Q5JVG8 444 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 BAP18Q8IXM2 172 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 GTSF1LQ9H1H1 148 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 TRAV8-1A0A0A6YYK1 113 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 ADMP35318 185 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 Q6ZQT7 251 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 DPM2O94777 84 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 ATOH7Q8N100 152 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 C8orf49Q96NF6 230 aa4.39□□□□□ -1.71
CDC42BPA-209ENST00000448940 LINC00473A8K010 186 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 SLC25A20O43772 301 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 MPC2O95563 127 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 RBM3P98179 157 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 MAP1LC3CQ9BXW4 147 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 HCFC1P51610 2035 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 MBPP02686 304 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 NAT8BQ9UHF3 227 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 PRSS29PA6NIE9 313 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 C15orf65H3BRN8 121 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 SUPT4H1P63272 117 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 CLLU1Q5K131 121 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 LY6G6FQ5SQ64 297 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 ZNF491Q8N8L2 437 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 TNFSF18Q9UNG2 199 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 C15orf62A8K5M9 175 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 BRI3O95415 125 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 TIRAPP58753 221 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 SERF2P84101 59 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 TPSG1Q9NRR2 321 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 UNC79Q9P2D8 2635 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 C2orf70A6NJV1 201 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 CTSGP08311 255 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 NEGR1Q7Z3B1 354 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 NPBQ8NG41 125 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 C5orf66Q9H5L9 145 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 TRAV12-2A0A075B6T6 113 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 NDUFC2-KCTD14E9PQ53 114 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 GAGE6Q13070 117 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 C11orf87Q6NUJ2 197 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 LINC00518Q8N0U6 118 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 BRK1Q8WUW1 75 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 TMEM190Q8WZ59 177 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 LINC00477Q96M19 166 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 TIMM17AQ99595 171 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 PARLQ9H300 379 aa4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 POLR3KQ9Y2Y1 108 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-209ENST00000448940 TRAV1-1A0A0B4J248 108 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 PMCHL1Q16048 86 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 MS4A6AQ9H2W1 248 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 XGP55808 180 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 YPEL3P61236 119 aaPredicted RBP4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 C1orf194Q5T5A4 169 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 ZNF880Q6PDB4 577 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 C16orf74Q96GX8 76 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 TOMM40O96008 361 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 ATP6V0CP27449 155 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 TRAV8-4A0A0B4J246 113 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 F8WEM9 126 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 UBE2AP49459 152 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 TRGV9Q99603 122 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 ZNF702PQ9H963 129 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 ODF3BA8MYP8 253 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 APCSP02743 223 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 PLA2G1BP04054 148 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 ATP6V0E2Q8NHE4 81 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 SS18L2Q9UHA2 77 aa4.37□□□□□ -1.71
CDC42BPA-209ENST00000448940 TRAPPC1Q9Y5R8 145 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms