RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 NDFIP1Q9BT67 221 aa10.94□□□□□ -0.66
CDK3-202ENST00000448471 NAT8BQ9UHF3 227 aa10.94□□□□□ -0.66
CDK3-202ENST00000448471 PRAC2D3DTV9 90 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 HIST1H2BKO60814 126 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 CA1P00915 261 aaPredicted RBP10.93□□□□□ -0.66
CDK3-202ENST00000448471 HIST1H2BJP06899 126 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 HIST1H2BOP23527 126 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 HIST1H2BBP33778 126 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 HIST1H2BDP58876 126 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 HIST1H2BCP62807 126 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 HIST2H2BEQ16778 126 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.93□□□□□ -0.66
CDK3-202ENST00000448471 RASL11AQ6T310 242 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 C9orf47Q6ZRZ4 202 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 FRZBQ92765 325 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 HIST1H2BHQ93079 126 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 DUX3Q96PT4 197 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 HIST1H2BNQ99877 126 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 HIST1H2BMQ99879 126 aa10.93□□□□□ -0.66
CDK3-202ENST00000448471 HUWE1Q7Z6Z7 4374 aaKnown RBP10.92□□□□□ -0.66
CDK3-202ENST00000448471 C5orf52A6NGY3 159 aa10.92□□□□□ -0.66
CDK3-202ENST00000448471 LINC01619G3V211 115 aa10.92□□□□□ -0.66
CDK3-202ENST00000448471 CRIP1P50238 77 aa10.92□□□□□ -0.66
CDK3-202ENST00000448471 SYNJ2BPP57105 145 aa10.92□□□□□ -0.66
CDK3-202ENST00000448471 WDR73Q6P4I2 378 aa10.92□□□□□ -0.66
CDK3-202ENST00000448471 TCF24Q7RTU0 167 aa10.92□□□□□ -0.66
CDK3-202ENST00000448471 NEU1Q99519 415 aa10.92□□□□□ -0.66
CDK3-202ENST00000448471 GNB1LQ9BYB4 327 aa10.92□□□□□ -0.66
CDK3-202ENST00000448471 TENM2Q9NT68 2774 aa10.92□□□□□ -0.66
CDK3-202ENST00000448471 OVOL1O14753 267 aa10.91□□□□□ -0.66
CDK3-202ENST00000448471 TRGC1P0CF51 173 aa10.91□□□□□ -0.66
CDK3-202ENST00000448471 TCL1AP56279 114 aa10.91□□□□□ -0.66
CDK3-202ENST00000448471 RPL11P62913 178 aaKnown RBP10.91□□□□□ -0.66
CDK3-202ENST00000448471 SMUG1Q53HV7 270 aa10.91□□□□□ -0.66
CDK3-202ENST00000448471 FAM162BQ5T6X4 162 aa10.91□□□□□ -0.66
CDK3-202ENST00000448471 NUP35Q8NFH5 326 aa10.91□□□□□ -0.66
CDK3-202ENST00000448471 C8orf49Q96NF6 230 aa10.91□□□□□ -0.66
CDK3-202ENST00000448471 SAV1Q9H4B6 383 aaPredicted RBP10.91□□□□□ -0.66
CDK3-202ENST00000448471 LENEPQ9Y5L5 61 aa10.91□□□□□ -0.66
CDK3-202ENST00000448471 TRAPPC1Q9Y5R8 145 aa10.91□□□□□ -0.66
CDK3-202ENST00000448471 LCE6AA0A183 80 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 C2orf70A6NJV1 201 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 HIGD1CA8MV81 97 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 MT-ND6P03923 174 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 ZNF138P52744 262 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 FOXA3P55318 350 aaPredicted RBP10.9□□□□□ -0.66
CDK3-202ENST00000448471 TMEM78Q5T7P6 136 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 ATP5L2Q7Z4Y8 100 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 OR2D3Q8NGH3 330 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 OR1N2Q8NGR9 330 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 RAX2Q96IS3 184 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 C20orf173Q96LM9 149 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 AGPAT4-IT1Q9H0P7 198 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 DNAH1Q9P2D7 4330 aa10.9□□□□□ -0.66
CDK3-202ENST00000448471 PRB4P10163 310 aaPredicted RBP10.9□□□□□ -0.67
CDK3-202ENST00000448471 CBLN1P23435 193 aa10.9□□□□□ -0.67
CDK3-202ENST00000448471 ID1P41134 155 aa10.9□□□□□ -0.67
CDK3-202ENST00000448471 SNRPEP62304 92 aaKnown RBP10.9□□□□□ -0.67
CDK3-202ENST00000448471 FABP9Q0Z7S8 132 aa10.9□□□□□ -0.67
CDK3-202ENST00000448471 ERCC8Q13216 396 aa10.9□□□□□ -0.67
CDK3-202ENST00000448471 C9orf66Q5T8R8 295 aa10.9□□□□□ -0.67
CDK3-202ENST00000448471 ZNF738Q8NE65 137 aa10.9□□□□□ -0.67
CDK3-202ENST00000448471 OR11H1Q8NG94 326 aa10.9□□□□□ -0.67
CDK3-202ENST00000448471 Q8TAT8 98 aa10.9□□□□□ -0.67
CDK3-202ENST00000448471 LINC00477Q96M19 166 aa10.9□□□□□ -0.67
CDK3-202ENST00000448471 STAB2Q8WWQ8 2551 aa10.89□□□□□ -0.67
CDK3-202ENST00000448471 DNAH7Q8WXX0 4024 aa10.89□□□□□ -0.67
CDK3-202ENST00000448471 CCL24O00175 119 aa10.89□□□□□ -0.67
CDK3-202ENST00000448471 UBE2CO00762 179 aa10.89□□□□□ -0.67
CDK3-202ENST00000448471 EDN2P20800 178 aa10.89□□□□□ -0.67
CDK3-202ENST00000448471 RBPMS2Q6ZRY4 209 aaKnown RBP10.89□□□□□ -0.67
CDK3-202ENST00000448471 DCANP1Q8TF63 244 aa10.89□□□□□ -0.67
CDK3-202ENST00000448471 GTSF1Q8WW33 167 aa10.89□□□□□ -0.67
CDK3-202ENST00000448471 RCHY1Q96PM5 261 aa10.89□□□□□ -0.67
CDK3-202ENST00000448471 PEMTQ9UBM1 199 aa10.89□□□□□ -0.67
CDK3-202ENST00000448471 XKRY2A2RUG3 117 aa10.88□□□□□ -0.67
CDK3-202ENST00000448471 SH2D1AO60880 128 aa10.88□□□□□ -0.67
CDK3-202ENST00000448471 Q6AWC8 147 aa10.88□□□□□ -0.67
CDK3-202ENST00000448471 OR10J6PQ8NGY7 276 aa10.88□□□□□ -0.67
CDK3-202ENST00000448471 TRBV7-9A0A0J9YWB2 115 aa10.87□□□□□ -0.67
CDK3-202ENST00000448471 FABP5P3A8MUU1 101 aa10.87□□□□□ -0.67
CDK3-202ENST00000448471 SNURFLB1AK76 121 aa10.87□□□□□ -0.67
CDK3-202ENST00000448471 HLA-DQA1P01909 254 aa10.87□□□□□ -0.67
CDK3-202ENST00000448471 HOXA5P20719 270 aa10.87□□□□□ -0.67
CDK3-202ENST00000448471 SLURP1P55000 103 aa10.87□□□□□ -0.67
CDK3-202ENST00000448471 RPS20P60866 119 aaKnown RBP10.87□□□□□ -0.67
CDK3-202ENST00000448471 DEFB136Q30KP8 78 aa10.87□□□□□ -0.67
CDK3-202ENST00000448471 MRPL54Q6P161 138 aaKnown RBP10.87□□□□□ -0.67
CDK3-202ENST00000448471 TMEM136Q6ZRR5 245 aa10.87□□□□□ -0.67
CDK3-202ENST00000448471 MS4A6AQ9H2W1 248 aa10.87□□□□□ -0.67
CDK3-202ENST00000448471 A0A1B0GXF2 115 aa10.86□□□□□ -0.67
CDK3-202ENST00000448471 SPINK4O60575 86 aa10.86□□□□□ -0.67
CDK3-202ENST00000448471 ZNF80P51504 273 aaPredicted RBP10.86□□□□□ -0.67
CDK3-202ENST00000448471 NDUFA6P56556 154 aa10.86□□□□□ -0.67
CDK3-202ENST00000448471 COA6Q5JTJ3 125 aaKnown RBP10.86□□□□□ -0.67
CDK3-202ENST00000448471 MRPL18Q9H0U6 180 aaKnown RBP10.86□□□□□ -0.67
CDK3-202ENST00000448471 ZNF256Q9Y2P7 627 aaPredicted RBP10.86□□□□□ -0.67
CDK3-202ENST00000448471 TMEM189A5PLL7 270 aa10.86□□□□□ -0.67
CDK3-202ENST00000448471 FRMD6-AS1P0C7T7 363 aa10.86□□□□□ -0.67
CDK3-202ENST00000448471 HIST1H1AQ02539 215 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms