RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 RPH3ALQ9UNE2 315 aa12.31□□□□□ -0.44
DDX56-207ENST00000448192 TRBV7-9A0A0J9YWB2 115 aa12.3□□□□□ -0.44
DDX56-207ENST00000448192 DIRC3C9JPN6 131 aa12.3□□□□□ -0.44
DDX56-207ENST00000448192 RAB2AP61019 212 aa12.3□□□□□ -0.44
DDX56-207ENST00000448192 MUC21Q5SSG8 566 aa12.3□□□□□ -0.44
DDX56-207ENST00000448192 IBA57Q5T440 356 aaKnown RBP12.3□□□□□ -0.44
DDX56-207ENST00000448192 OTORQ9NRC9 128 aa12.3□□□□□ -0.44
DDX56-207ENST00000448192 PGPA6NDG6 321 aa12.29□□□□□ -0.44
DDX56-207ENST00000448192 H3BNG1 76 aa12.29□□□□□ -0.44
DDX56-207ENST00000448192 HMGB3O15347 200 aaKnown RBP12.29□□□□□ -0.44
DDX56-207ENST00000448192 SPINK4O60575 86 aa12.29□□□□□ -0.44
DDX56-207ENST00000448192 ZNF266Q14584 549 aa12.29□□□□□ -0.44
DDX56-207ENST00000448192 OR10G4Q8NGN3 311 aa12.29□□□□□ -0.44
DDX56-207ENST00000448192 OR10G9Q8NGN4 311 aa12.29□□□□□ -0.44
DDX56-207ENST00000448192 OR10G7Q8NGN6 311 aa12.29□□□□□ -0.44
DDX56-207ENST00000448192 CMTM2Q8TAZ6 248 aa12.29□□□□□ -0.44
DDX56-207ENST00000448192 MRPL16Q9NX20 251 aaKnown RBP12.29□□□□□ -0.44
DDX56-207ENST00000448192 ZNF415Q09FC8 603 aa12.28□□□□□ -0.44
DDX56-207ENST00000448192 ESRGQ1W209 222 aa12.28□□□□□ -0.44
DDX56-207ENST00000448192 FAM74A1Q5RGS3 127 aa12.28□□□□□ -0.44
DDX56-207ENST00000448192 PQLC2Q6ZP29 291 aa12.28□□□□□ -0.44
DDX56-207ENST00000448192 VSIG2Q96IQ7 327 aa12.28□□□□□ -0.44
DDX56-207ENST00000448192 C18orf15Q96N68 181 aa12.28□□□□□ -0.44
DDX56-207ENST00000448192 Q9H8V8 135 aa12.28□□□□□ -0.44
DDX56-207ENST00000448192 IGHV3-53P01767 116 aa12.27□□□□□ -0.45
DDX56-207ENST00000448192 C6orf223Q8N319 242 aa12.27□□□□□ -0.45
DDX56-207ENST00000448192 HSD17B11Q8NBQ5 300 aa12.27□□□□□ -0.45
DDX56-207ENST00000448192 LENEPQ9Y5L5 61 aa12.27□□□□□ -0.45
DDX56-207ENST00000448192 MUC4Q99102 2169 aa12.26□□□□□ -0.45
DDX56-207ENST00000448192 GOLT1AQ6ZVE7 132 aa12.26□□□□□ -0.45
DDX56-207ENST00000448192 ST6GAL2Q96JF0 529 aa12.26□□□□□ -0.45
DDX56-207ENST00000448192 AQP10Q96PS8 301 aa12.26□□□□□ -0.45
DDX56-207ENST00000448192 ARL14EPLP0DKL9 152 aa12.25□□□□□ -0.45
DDX56-207ENST00000448192 CDC34P49427 236 aaPredicted RBP12.25□□□□□ -0.45
DDX56-207ENST00000448192 TMEM183BQ1AE95 376 aa12.25□□□□□ -0.45
DDX56-207ENST00000448192 Q6AWC8 147 aa12.25□□□□□ -0.45
DDX56-207ENST00000448192 FAM159AQ6UWV7 190 aa12.25□□□□□ -0.45
DDX56-207ENST00000448192 TMEM183AQ8IXX5 376 aa12.25□□□□□ -0.45
DDX56-207ENST00000448192 TMED6Q8WW62 240 aa12.25□□□□□ -0.45
DDX56-207ENST00000448192 MDFICQ9P1T7 246 aa12.25□□□□□ -0.45
DDX56-207ENST00000448192 NAGKQ9UJ70 344 aa12.25□□□□□ -0.45
DDX56-207ENST00000448192 A0A096LPF7 62 aa12.24□□□□□ -0.45
DDX56-207ENST00000448192 PAX4O43316 350 aa12.24□□□□□ -0.45
DDX56-207ENST00000448192 ATP6V0CP27449 155 aa12.24□□□□□ -0.45
DDX56-207ENST00000448192 GNG5P63218 68 aa12.24□□□□□ -0.45
DDX56-207ENST00000448192 TNP2Q05952 138 aa12.24□□□□□ -0.45
DDX56-207ENST00000448192 Q5BKY6 102 aa12.24□□□□□ -0.45
DDX56-207ENST00000448192 OR2G3Q8NGZ4 309 aa12.24□□□□□ -0.45
DDX56-207ENST00000448192 MRPS16Q9Y3D3 137 aaKnown RBP12.24□□□□□ -0.45
DDX56-207ENST00000448192 GIPP09681 153 aaPredicted RBP12.23□□□□□ -0.45
DDX56-207ENST00000448192 RAB24Q969Q5 203 aa12.23□□□□□ -0.45
DDX56-207ENST00000448192 PSMG3Q9BT73 122 aaPredicted RBP12.23□□□□□ -0.45
DDX56-207ENST00000448192 UPK3BQ9BT76 320 aa12.23□□□□□ -0.45
DDX56-207ENST00000448192 TRGV11A0A075B6L2 103 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 TRAV8-1A0A0A6YYK1 113 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 STAG3L2P0CL84 134 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 STAG3L3P0CL85 134 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 MED14OSP0DP75 135 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 TTC32Q5I0X7 151 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 ARL6IP6Q8N6S5 226 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 INO80EQ8NBZ0 244 aaPredicted RBP12.22□□□□□ -0.45
DDX56-207ENST00000448192 C8orf49Q96NF6 230 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 SH3BGRL3Q9H299 93 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 TREM1Q9NP99 234 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 PRO0255Q9UI72 69 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 HHLA3Q9XRX5 114 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 ICOSQ9Y6W8 199 aa12.22□□□□□ -0.45
DDX56-207ENST00000448192 F6UZH7 168 aa12.21□□□□□ -0.45
DDX56-207ENST00000448192 MBP02144 154 aa12.21□□□□□ -0.45
DDX56-207ENST00000448192 SLAQ13239 276 aa12.21□□□□□ -0.45
DDX56-207ENST00000448192 FHL2Q14192 279 aa12.21□□□□□ -0.45
DDX56-207ENST00000448192 ZNF575Q86XF7 245 aa12.21□□□□□ -0.45
DDX56-207ENST00000448192 SGK494Q96LW2 274 aa12.21□□□□□ -0.45
DDX56-207ENST00000448192 SPXQ9BT56 116 aa12.21□□□□□ -0.45
DDX56-207ENST00000448192 KRTAP1-5Q9BYS1 174 aa12.21□□□□□ -0.45
DDX56-207ENST00000448192 FXYD6-FXYD2A0A087WZ82 144 aa12.2□□□□□ -0.46
DDX56-207ENST00000448192 TRAV21A0A0B4J279 112 aa12.2□□□□□ -0.46
DDX56-207ENST00000448192 TRGV4A0A0C4DH28 118 aa12.2□□□□□ -0.46
DDX56-207ENST00000448192 GNRH2O43555 120 aa12.2□□□□□ -0.46
DDX56-207ENST00000448192 GCHFRP30047 84 aa12.2□□□□□ -0.46
DDX56-207ENST00000448192 CRYBA4P53673 196 aa12.2□□□□□ -0.46
DDX56-207ENST00000448192 SERF2P84101 59 aa12.2□□□□□ -0.46
DDX56-207ENST00000448192 ASB13Q8WXK3 278 aa12.2□□□□□ -0.46
DDX56-207ENST00000448192 TVP23CQ96ET8 276 aa12.2□□□□□ -0.46
DDX56-207ENST00000448192 SFTA3P0C7M3 94 aa12.19□□□□□ -0.46
DDX56-207ENST00000448192 TDRG1Q3Y452 100 aa12.19□□□□□ -0.46
DDX56-207ENST00000448192 ACTR3CQ9C0K3 210 aaPredicted RBP12.19□□□□□ -0.46
DDX56-207ENST00000448192 RPL7L1Q6DKI1 246 aaKnown RBP12.18□□□□□ -0.46
DDX56-207ENST00000448192 IQCF2Q8IXL9 164 aa12.18□□□□□ -0.46
DDX56-207ENST00000448192 C5orf17Q8NAS9 161 aa12.18□□□□□ -0.46
DDX56-207ENST00000448192 RASL10AQ92737 203 aa12.18□□□□□ -0.46
DDX56-207ENST00000448192 ZNF479Q96JC4 524 aa12.18□□□□□ -0.46
DDX56-207ENST00000448192 NDFIP1Q9BT67 221 aa12.18□□□□□ -0.46
DDX56-207ENST00000448192 TNFSF18Q9UNG2 199 aa12.18□□□□□ -0.46
DDX56-207ENST00000448192 BORCS7-ASMTA0A0B4J1R7 106 aa12.17□□□□□ -0.46
DDX56-207ENST00000448192 IGHV3-16A0A0C4DH30 117 aa12.17□□□□□ -0.46
DDX56-207ENST00000448192 SERTM2A0A1B0GWG4 89 aa12.17□□□□□ -0.46
DDX56-207ENST00000448192 A0A1W2PPQ1 181 aa12.17□□□□□ -0.46
DDX56-207ENST00000448192 RNF222A6NCQ9 220 aa12.17□□□□□ -0.46
DDX56-207ENST00000448192 K7EQM0 130 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms