RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 CRISP2P16562 243 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 HLA-DMAP28067 261 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 UBE2D1P51668 147 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 PRR9Q5T870 116 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 GGNBP1Q5YKI7 109 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 TMEM182Q6ZP80 229 aaPredicted RBP1.88□□□□□ -2.11
PMS1-215ENST00000447232 LGI3Q8N145 548 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 CYB561D1Q8N8Q1 229 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 OR4D10Q8NGI6 311 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 ATG5Q9H1Y0 275 aa1.88□□□□□ -2.11
PMS1-215ENST00000447232 IGLV10-54A0A075B6I4 117 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 A0A096LNI7 61 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 FBLL1A6NHQ2 334 aaKnown RBP1.87□□□□□ -2.11
PMS1-215ENST00000447232 NMBP08949 121 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 OR4E1P0C645 316 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 RNASE4P34096 147 aaKnown RBP1.87□□□□□ -2.11
PMS1-215ENST00000447232 GPX4P36969 197 aaPredicted RBP1.87□□□□□ -2.11
PMS1-215ENST00000447232 PHLDA2Q53GA4 152 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 LCN15Q6UWW0 184 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 ZFAND2AQ8N6M9 145 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 NEXN-AS1Q8NBZ9 246 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 LRRC20Q8TCA0 184 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 SLC50A1Q9BRV3 221 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 ZNF2Q9BSG1 426 aaPredicted RBP1.87□□□□□ -2.11
PMS1-215ENST00000447232 TMEM147Q9BVK8 224 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 DIABLOQ9NR28 239 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 SSR3Q9UNL2 185 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 A0A087WX48 190 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 IFITM5A6NNB3 132 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 PMS2P5A8MQ11 134 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 ANKRD65E5RJM6 399 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 GABARAPH6UMI1 98 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 SLC17A3O00476 420 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 CASQ2O14958 399 aaPredicted RBP1.87□□□□□ -2.11
PMS1-215ENST00000447232 ZNF253O75346 499 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 GABARAPO95166 117 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 HOXB5P09067 269 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 ORM2P19652 201 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 S100A7P31151 101 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 AKR1C2P52895 323 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 MIAQ16674 131 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 GPR107Q5VW38 600 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 ACOT7LQ6ZUV0 252 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 DHRSXQ8N5I4 330 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 SUN5Q8TC36 379 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 LINC00477Q96M19 166 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 CCDC90BQ9GZT6 254 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 RPP21Q9H633 154 aaKnown RBP1.87□□□□□ -2.11
PMS1-215ENST00000447232 AUNIPQ9H7T9 357 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 POMPQ9Y244 141 aa1.87□□□□□ -2.11
PMS1-215ENST00000447232 CARHSP1Q9Y2V2 147 aaKnown RBP1.87□□□□□ -2.11
PMS1-215ENST00000447232 PGPA6NDG6 321 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 CIDEAO60543 219 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 ARL6IP5O75915 188 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 CRPP02741 224 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 IGLV7-43P04211 117 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 SEC61BP60468 96 aaKnown RBP1.86□□□□□ -2.11
PMS1-215ENST00000447232 RAB31Q13636 194 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 SAMD10Q9BYL1 202 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 PRR34Q9NV39 138 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 EHFQ9NZC4 300 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 ORC6Q9Y5N6 252 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 KRTAP9-6A8MVA2 160 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 M0R2P5 195 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 M0R2T5 61 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 GPX1P07203 203 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 INPP1P49441 399 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 UBE2MP61081 183 aaKnown RBP1.86□□□□□ -2.11
PMS1-215ENST00000447232 BAK1Q16611 211 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 TRIM16LQ309B1 348 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 C1orf137Q5JT78 98 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 CFAP126Q5VTH2 177 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 TMED6Q8WW62 240 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 SAT2Q96F10 170 aaPredicted RBP1.86□□□□□ -2.11
PMS1-215ENST00000447232 MGLLQ99685 303 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 AGPAT4-IT1Q9H0P7 198 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 C20orf85Q9H1P6 137 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 PPDPFQ9H3Y8 114 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 PLCXD1Q9NUJ7 323 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 LINC00474Q9P2X8 69 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 Q9UF83 564 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 U3KQ87 197 aa1.86□□□□□ -2.11
PMS1-215ENST00000447232 LOC100130705A0A1B0GUX0 176 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 MYL12BO14950 172 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 SCGNO76038 276 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 MT-ND6P03923 174 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 MGST1P10620 155 aaKnown RBP1.85□□□□□ -2.11
PMS1-215ENST00000447232 AMTP48728 403 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 PLP1P60201 277 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 GAGE1Q13065 139 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 GAGE4Q13068 117 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 GAGE5Q13069 117 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 ERCC8Q13216 396 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 LCE1FQ5T754 118 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 C15orf54Q8N8G6 183 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 OR1S1Q8NH92 325 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 TP53RKQ96S44 253 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 GFRA4Q9GZZ7 299 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.85□□□□□ -2.11
PMS1-215ENST00000447232 AP4S1Q9Y587 144 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms