RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PPIFP30405 207 aaKnown RBP14.68□□□□□ -0.06
SDCBP-204ENST00000447182 RAB37Q96AX2 223 aa14.68□□□□□ -0.06
SDCBP-204ENST00000447182 HIF1ANQ9NWT6 349 aa14.68□□□□□ -0.06
SDCBP-204ENST00000447182 SMIM13P0DJ93 91 aa14.68□□□□□ -0.06
SDCBP-204ENST00000447182 NAA38Q9BRA0 125 aaKnown RBP14.68□□□□□ -0.06
SDCBP-204ENST00000447182 MEGF9Q9H1U4 602 aa14.68□□□□□ -0.06
SDCBP-204ENST00000447182 IGHV7-4-1A0A0J9YVY3 117 aa14.67□□□□□ -0.06
SDCBP-204ENST00000447182 SAP30O75446 220 aa14.67□□□□□ -0.06
SDCBP-204ENST00000447182 NEGR1Q7Z3B1 354 aa14.67□□□□□ -0.06
SDCBP-204ENST00000447182 CCDC140Q96MF4 163 aa14.67□□□□□ -0.06
SDCBP-204ENST00000447182 FOXC2Q99958 501 aa14.67□□□□□ -0.06
SDCBP-204ENST00000447182 CSTL1Q9H114 145 aa14.67□□□□□ -0.06
SDCBP-204ENST00000447182 IGHV4-4A0A075B6R2 117 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 TRAV8-2A0A0B4J237 113 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 ATP6V0E1O15342 81 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 SMIM17P0DL12 118 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 NBL1P41271 181 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 CDSNQ15517 529 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 ECSCRQ19T08 205 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 NRACQ8N912 160 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 SPCS1Q9Y6A9 102 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 CSMD1Q96PZ7 3565 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 TRGV3P03979 118 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 TMEM78Q5T7P6 136 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 C9orf47Q6ZRZ4 202 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 AJUBAQ96IF1 538 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 CHAC1Q9BUX1 264 aa14.66□□□□□ -0.06
SDCBP-204ENST00000447182 G3V4G9 280 aa14.65□□□□□ -0.06
SDCBP-204ENST00000447182 FABP2P12104 132 aa14.65□□□□□ -0.06
SDCBP-204ENST00000447182 FXYD2P54710 66 aa14.65□□□□□ -0.06
SDCBP-204ENST00000447182 TRBV25-1A0A075B6N4 114 aa14.65□□□□□ -0.06
SDCBP-204ENST00000447182 TMEM8BA6NDV4 472 aa14.65□□□□□ -0.06
SDCBP-204ENST00000447182 UBE2E1P51965 193 aa14.65□□□□□ -0.06
SDCBP-204ENST00000447182 LAGE3Q14657 143 aa14.65□□□□□ -0.06
SDCBP-204ENST00000447182 SAMD5Q5TGI4 173 aa14.65□□□□□ -0.06
SDCBP-204ENST00000447182 GCSHP23434 173 aa14.64□□□□□ -0.07
SDCBP-204ENST00000447182 ADORA2A-AS1P86434 159 aa14.64□□□□□ -0.07
SDCBP-204ENST00000447182 SRSF1Q07955 248 aaKnown RBP eCLIP14.64□□□□□ -0.07
SDCBP-204ENST00000447182 ZC2HC1BQ5TFG8 222 aa14.64□□□□□ -0.07
SDCBP-204ENST00000447182 CLEC19AQ6UXS0 136 aa14.64□□□□□ -0.07
SDCBP-204ENST00000447182 METTL26Q96S19 204 aa14.64□□□□□ -0.07
SDCBP-204ENST00000447182 TM2D2Q9BX73 214 aa14.64□□□□□ -0.07
SDCBP-204ENST00000447182 U3KQE9 123 aa14.64□□□□□ -0.07
SDCBP-204ENST00000447182 IGHV3-66A0A0C4DH42 116 aa14.63□□□□□ -0.07
SDCBP-204ENST00000447182 C8orf86Q6ZUL3 223 aa14.63□□□□□ -0.07
SDCBP-204ENST00000447182 MYOZ3Q8TDC0 251 aa14.63□□□□□ -0.07
SDCBP-204ENST00000447182 EEF1AKMT3Q96AZ1 226 aa14.63□□□□□ -0.07
SDCBP-204ENST00000447182 TTTY13Q9BZ97 58 aa14.63□□□□□ -0.07
SDCBP-204ENST00000447182 PTPRQQ9UMZ3 2332 aa14.63□□□□□ -0.07
SDCBP-204ENST00000447182 TRBV7-1A0A0A6YYK4 115 aa14.63□□□□□ -0.07
SDCBP-204ENST00000447182 TM4SF20Q53R12 229 aa14.63□□□□□ -0.07
SDCBP-204ENST00000447182 GTSCR1Q86UQ5 136 aa14.63□□□□□ -0.07
SDCBP-204ENST00000447182 PHLDA1Q8WV24 401 aaPredicted RBP14.62□□□□□ -0.07
SDCBP-204ENST00000447182 CEND1Q8N111 149 aa14.61□□□□□ -0.07
SDCBP-204ENST00000447182 MRPL35Q9NZE8 188 aaKnown RBP14.61□□□□□ -0.07
SDCBP-204ENST00000447182 SPTBN2O15020 2390 aa14.61□□□□□ -0.07
SDCBP-204ENST00000447182 A0A087WX48 190 aa14.6□□□□□ -0.07
SDCBP-204ENST00000447182 TRAV40A0A0B4J280 105 aa14.6□□□□□ -0.07
SDCBP-204ENST00000447182 TMEM160Q9NX00 188 aa14.6□□□□□ -0.07
SDCBP-204ENST00000447182 HRNRQ86YZ3 2850 aaPredicted RBP14.6□□□□□ -0.07
SDCBP-204ENST00000447182 IGHV3OR16-13A0A075B7E8 117 aa14.6□□□□□ -0.07
SDCBP-204ENST00000447182 IGHV3-74A0A0B4J1X5 117 aa14.6□□□□□ -0.07
SDCBP-204ENST00000447182 G3V318 75 aa14.6□□□□□ -0.07
SDCBP-204ENST00000447182 FOXC1Q12948 553 aa14.6□□□□□ -0.07
SDCBP-204ENST00000447182 MRAP2Q96G30 205 aa14.6□□□□□ -0.07
SDCBP-204ENST00000447182 ATP6V0BQ99437 205 aa14.6□□□□□ -0.07
SDCBP-204ENST00000447182 UFC1Q9Y3C8 167 aa14.6□□□□□ -0.07
SDCBP-204ENST00000447182 LENEPQ9Y5L5 61 aa14.6□□□□□ -0.07
SDCBP-204ENST00000447182 TAL2Q16559 108 aa14.59□□□□□ -0.07
SDCBP-204ENST00000447182 SPANXN1Q5VSR9 72 aa14.59□□□□□ -0.07
SDCBP-204ENST00000447182 SELENOKQ9Y6D0 94 aa14.59□□□□□ -0.07
SDCBP-204ENST00000447182 TRAV26-2A0A0B4J265 109 aa14.59□□□□□ -0.07
SDCBP-204ENST00000447182 SAA4P35542 130 aa14.59□□□□□ -0.07
SDCBP-204ENST00000447182 CENPVL3A0A0U1RRI6 287 aa14.58□□□□□ -0.08
SDCBP-204ENST00000447182 PLNP26678 52 aa14.58□□□□□ -0.08
SDCBP-204ENST00000447182 LINC01548A6NM66 108 aa14.57□□□□□ -0.08
SDCBP-204ENST00000447182 IGHV3-49A0A0A0MS15 119 aa14.57□□□□□ -0.08
SDCBP-204ENST00000447182 TRAV12-1A0A0B4J245 112 aa14.57□□□□□ -0.08
SDCBP-204ENST00000447182 ZNF207O43670 478 aaKnown RBP14.56□□□□□ -0.08
SDCBP-204ENST00000447182 C9orf139Q6ZV77 190 aa14.56□□□□□ -0.08
SDCBP-204ENST00000447182 ITLN2Q8WWU7 325 aaPredicted RBP14.56□□□□□ -0.08
SDCBP-204ENST00000447182 SMIM2Q9BVW6 85 aa14.56□□□□□ -0.08
SDCBP-204ENST00000447182 SPTA1P02549 2419 aa14.56□□□□□ -0.08
SDCBP-204ENST00000447182 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.56□□□□□ -0.08
SDCBP-204ENST00000447182 ATP5G2Q06055 141 aa14.56□□□□□ -0.08
SDCBP-204ENST00000447182 Q6ZQT7 251 aa14.56□□□□□ -0.08
SDCBP-204ENST00000447182 C5orf56Q8N8D9 126 aa14.56□□□□□ -0.08
SDCBP-204ENST00000447182 MAPKAPK5-AS1Q8N8E1 139 aa14.56□□□□□ -0.08
SDCBP-204ENST00000447182 GLMPQ8WWB7 406 aa14.56□□□□□ -0.08
SDCBP-204ENST00000447182 NHP2Q9NX24 153 aaKnown RBP14.56□□□□□ -0.08
SDCBP-204ENST00000447182 H3BVH4 76 aa14.55□□□□□ -0.08
SDCBP-204ENST00000447182 K7ERJ3 54 aa14.55□□□□□ -0.08
SDCBP-204ENST00000447182 C16orf92Q96LL3 132 aa14.55□□□□□ -0.08
SDCBP-204ENST00000447182 CEP295Q9C0D2 2601 aa14.55□□□□□ -0.08
SDCBP-204ENST00000447182 E9PLD3 99 aa14.54□□□□□ -0.08
SDCBP-204ENST00000447182 RIPPLY3P57055 190 aa14.54□□□□□ -0.08
SDCBP-204ENST00000447182 PRR9Q5T870 116 aa14.54□□□□□ -0.08
SDCBP-204ENST00000447182 PTPRZ1P23471 2315 aaPredicted RBP14.54□□□□□ -0.08
SDCBP-204ENST00000447182 RELNP78509 3460 aa14.54□□□□□ -0.08
SDCBP-204ENST00000447182 F8VRH5 84 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms