RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 GAGE12JA6NER3 117 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 GAGE1Q13065 139 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 GAGE4Q13068 117 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 GAGE5Q13069 117 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 GAGE13Q4V321 117 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 MAPK1IP1LQ8NDC0 245 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 ZNF479Q96JC4 524 aa6.78□□□□□ -1.32
PTPN3-204ENST00000446349 RBMY1FQ15415 496 aaKnown RBP6.77□□□□□ -1.32
PTPN3-204ENST00000446349 FAM104BQ5XKR9 115 aa6.77□□□□□ -1.32
PTPN3-204ENST00000446349 WIPF2Q8TF74 440 aaPredicted RBP6.77□□□□□ -1.32
PTPN3-204ENST00000446349 CYTL1Q9NRR1 136 aa6.77□□□□□ -1.32
PTPN3-204ENST00000446349 IGLC1P0CG04 106 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 PLCE1Q9P212 2302 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 A0A087WWL8 130 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 IGHV4-59P01825 116 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 WDR86Q86TI4 376 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 C4orf3Q8WVX3 66 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 VOPP1Q96AW1 172 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 ADORA2A-AS1P86434 159 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 C14orf177Q52M58 125 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 C1orf43Q9BWL3 253 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 ESDP10768 282 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 VSIRQ9H7M9 311 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 HIVEP2P31629 2446 aa6.77□□□□□ -1.33
PTPN3-204ENST00000446349 HERV-K104P63124 156 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 IGF2BP2-AS1Q96M15 143 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 TRBV20-1A0A075B6N2 111 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 IGHV4-30-2A0A087WSY4 118 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 ATP5G1P05496 136 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 IGHV4-61A0A0C4DH41 118 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 IGKV1-6A0A0C4DH72 117 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 HIST1H2BKO60814 126 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 NCR2O95944 276 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 HIST1H2BJP06899 126 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 HIST1H2BOP23527 126 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 HIST1H2BBP33778 126 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 HIST1H2BDP58876 126 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 HIST1H2BCP62807 126 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 HIST2H2BEQ16778 126 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.76□□□□□ -1.33
PTPN3-204ENST00000446349 ZNRF2Q8NHG8 242 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 HIST1H2BHQ93079 126 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 HIST1H2BNQ99877 126 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 HIST1H2BMQ99879 126 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 CITED1Q99966 193 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 ANGP03950 147 aaKnown RBP6.76□□□□□ -1.33
PTPN3-204ENST00000446349 KRTAP27-1Q3LI81 207 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 GPHB5Q86YW7 130 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 TMEM95Q3KNT9 176 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 SAMD5Q5TGI4 173 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 KLHDC3Q9BQ90 382 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 SYS1-DBNDD2H3BUS1 97 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 Q0VG73 95 aa6.76□□□□□ -1.33
PTPN3-204ENST00000446349 SDHAF1A6NFY7 115 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 STPG4Q8N801 248 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 KLF5Q13887 457 aaPredicted RBP6.75□□□□□ -1.33
PTPN3-204ENST00000446349 TRAV8-1A0A0A6YYK1 113 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 HLA-DRB4P13762 266 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 TP53TG1Q9Y2A0 90 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 SMAD5-AS1Q9Y6J3 95 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 HLA-DRB4X5D2U9 266 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 Q6ZSR3 168 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 NDUFA11Q86Y39 141 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 AMN1Q8IY45 258 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 RIPPLY3P57055 190 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 IL15RAQ13261 267 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 NDUFAF3Q9BU61 184 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 WT1-ASQ06250 92 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 SPRY4Q9C004 299 aa6.75□□□□□ -1.33
PTPN3-204ENST00000446349 Q6ZRM9 215 aa6.74□□□□□ -1.33
PTPN3-204ENST00000446349 ANXA2RQ3ZCQ2 193 aa6.74□□□□□ -1.33
PTPN3-204ENST00000446349 C2orf66Q6UXQ4 117 aa6.74□□□□□ -1.33
PTPN3-204ENST00000446349 A8MWP6 167 aa6.74□□□□□ -1.33
PTPN3-204ENST00000446349 C5orf56Q8N8D9 126 aa6.74□□□□□ -1.33
PTPN3-204ENST00000446349 ZNF491Q8N8L2 437 aa6.74□□□□□ -1.33
PTPN3-204ENST00000446349 IGHV3-64A0A075B6Q5 118 aa6.74□□□□□ -1.33
PTPN3-204ENST00000446349 MED13LQ71F56 2210 aa6.74□□□□□ -1.33
PTPN3-204ENST00000446349 H3BUT2 72 aa6.74□□□□□ -1.33
PTPN3-204ENST00000446349 MMP23AO75900 390 aa6.74□□□□□ -1.33
PTPN3-204ENST00000446349 ARTNQ5T4W7 220 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 C2orf82Q6UX34 121 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 Q71RC1 249 aaPredicted RBP6.73□□□□□ -1.33
PTPN3-204ENST00000446349 ANAPC13Q9BS18 74 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 ACACBO00763 2458 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 A0A0G2JRQ6 117 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 PIFOQ8TCI5 191 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 C11orf52Q96A22 123 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 IGLC7A0M8Q6 106 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 TNCP24821 2201 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 SOCS3O14543 225 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 OTOGLQ3ZCN5 2332 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 MED14OSP0DP75 135 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 KLK9Q9UKQ9 250 aa6.73□□□□□ -1.33
PTPN3-204ENST00000446349 C1orf147Q96MC9 270 aaPredicted RBP6.73□□□□□ -1.33
PTPN3-204ENST00000446349 IGHG2P01859 326 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 SMIM2Q9BVW6 85 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 UBE2BP63146 152 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 CD5LO43866 347 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 GAGE6Q13070 117 aa6.72□□□□□ -1.33
PTPN3-204ENST00000446349 SHISA2Q6UWI4 295 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms