RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 IGHV1-3A0A0C4DH29 117 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 TRBV10-3A0A0K0K1G6 114 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 MYMXA0A1B0GTQ4 84 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 ZNF503-AS2A6NEH8 195 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 H7BZZ5 65 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 IGHV1-46P01743 117 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 HMGN2P05204 90 aaKnown RBP1.96□□□□□ -2.1
UBBP3-201ENST00000445497 COX6CP09669 75 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 GCHFRP30047 84 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 XCL1P47992 114 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 ZNF816Q0VGE8 651 aaPredicted RBP1.96□□□□□ -2.1
UBBP3-201ENST00000445497 KLF9Q13886 244 aaPredicted RBP1.96□□□□□ -2.1
UBBP3-201ENST00000445497 KRTAP27-1Q3LI81 207 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 LUZP6Q538Z0 58 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 C9orf116Q5BN46 136 aaPredicted RBP1.96□□□□□ -2.1
UBBP3-201ENST00000445497 ATP5EP2Q5VTU8 51 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 ZNF826PQ6ZT77 177 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 LYZL2Q7Z4W2 148 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 FAM167A-AS1Q96KT0 104 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 C1orf147Q96MC9 270 aaPredicted RBP1.96□□□□□ -2.1
UBBP3-201ENST00000445497 LIMD2Q9BT23 127 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 NMES1Q9C002 83 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 C14orf132Q9NPU4 83 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 DHRS4-AS1Q9P1J3 65 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 PRO1854Q9UHT4 67 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 ASXL1Q8IXJ9 1541 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 ZSWIM8A7E2V4 1837 aa1.96□□□□□ -2.1
UBBP3-201ENST00000445497 TCHHQ07283 1943 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 LRRK1Q38SD2 2015 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 NUP205Q92621 2012 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 CCDC88AQ3V6T2 1871 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 KMT2EQ8IZD2 1858 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 SAMD9Q5K651 1589 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 MAST1Q9Y2H9 1570 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 PRAC2D3DTV9 90 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 H3BMM0 161 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 ERC2-IT1O76042 136 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 LY6HO94772 140 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 EFNA4P52798 201 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 DSCR4P56555 118 aaPredicted RBP1.95□□□□□ -2.1
UBBP3-201ENST00000445497 UBE2D3P61077 147 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 UBE2D2P62837 147 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 SUPT4H1P63272 117 aaKnown RBP1.95□□□□□ -2.1
UBBP3-201ENST00000445497 SYCNQ0VAF6 134 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 FHL2Q14192 279 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 S100A7L2Q5SY68 101 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 IGFL3Q6UXB1 125 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 VMO1Q7Z5L0 202 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 NDUFA11Q86Y39 141 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 C9orf106Q8NAJ2 232 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 SMIM4Q8WVI0 70 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 UBE2WQ96B02 151 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 WWC2-AS2Q96NR7 200 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 TTTY13Q9BZ97 58 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 ABRACLQ9P1F3 81 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 GNG13Q9P2W3 67 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 TIMM9Q9Y5J7 89 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.95□□□□□ -2.1
UBBP3-201ENST00000445497 MYH7BA7E2Y1 1941 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 STRCQ7RTU9 1775 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 RAPGEF6Q8TEU7 1601 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 CC2D2AQ9P2K1 1620 aa1.95□□□□□ -2.1
UBBP3-201ENST00000445497 COL24A1Q17RW2 1714 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 CDC42BPAQ5VT25 1732 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 VWDEQ8N2E2 1590 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 ECM29Q5VYK3 1845 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 WIZO95785 1651 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 ALPK3Q96L96 1907 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 IGLV7-46A0A075B6I9 117 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 TRBV25-1A0A075B6N4 114 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 IGKV1D-17A0A075B6S4 117 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 TRAV7A0A075B6U4 112 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 IGHV3-15A0A0B4J1V0 119 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 LOC107984156A0A0G2JMH3 177 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 TRBV10-2A0A0K0K1G8 114 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 A6NED7 52 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 C2orf70A6NJV1 201 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 CEBPZOSA8MTT3 80 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 IGLV3-25P01717 112 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 PRH1P02810 166 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 PLA2G5P39877 138 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 IFI27P40305 119 aaPredicted RBP1.94□□□□□ -2.1
UBBP3-201ENST00000445497 CMC4P56277 68 aaPredicted RBP1.94□□□□□ -2.1
UBBP3-201ENST00000445497 LYZP61626 148 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 PLGLAQ15195 96 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 ATXN8Q156A1 80 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 SPANXN5Q5MJ07 72 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 LYPD5Q6UWN5 251 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 CASC2Q6XLA1 102 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 ZNF818PQ6ZRF7 136 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 Q6ZTC4 211 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 ARL17AQ8IVW1 177 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 PPP1R1CQ8WVI7 109 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 FAM103A1Q9BTL3 118 aaKnown RBP1.94□□□□□ -2.1
UBBP3-201ENST00000445497 CDC42SE1Q9NRR8 79 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 LINC00474Q9P2X8 69 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 DOCK6Q96HP0 2047 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 NLRC5Q86WI3 1866 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 MYO3AQ8NEV4 1616 aa1.94□□□□□ -2.1
UBBP3-201ENST00000445497 COL2A1P02458 1487 aaPredicted RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms