RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 LYPD1Q8N2G4 141 aa6.89□□□□□ -1.31
LINC00642-203ENST00000444942 METTL26Q96S19 204 aa6.89□□□□□ -1.31
LINC00642-203ENST00000444942 DNAH2Q9P225 4427 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 TRBV19A0A075B6N1 114 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 TRAV34A0A0B4J273 112 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 OR11H12B2RN74 326 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 K7EQM0 130 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 SLC17A3O00476 420 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 HIST1H2BKO60814 126 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 HIST1H2BJP06899 126 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 TRGC1P0CF51 173 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 RPL7P18124 248 aaKnown RBP6.88□□□□□ -1.31
LINC00642-203ENST00000444942 HIST1H2BOP23527 126 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 HIST1H2BBP33778 126 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 NDUFA6P56556 154 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 HIST1H2BDP58876 126 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 HIST1H2BCP62807 126 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 FABP9Q0Z7S8 132 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 PDE6HQ13956 83 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 HIST2H2BEQ16778 126 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 SMUG1Q53HV7 270 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.88□□□□□ -1.31
LINC00642-203ENST00000444942 FRZBQ92765 325 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 HIST1H2BHQ93079 126 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 LINC00479Q96M42 142 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 HIST1H2BNQ99877 126 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 HIST1H2BMQ99879 126 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 SPATA25Q9BR10 227 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 KLF12Q9Y4X4 402 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 V9GYV3 84 aa6.88□□□□□ -1.31
LINC00642-203ENST00000444942 ZNF705GA8MUZ8 300 aaPredicted RBP6.87□□□□□ -1.31
LINC00642-203ENST00000444942 MRPS12O15235 138 aaKnown RBP6.87□□□□□ -1.31
LINC00642-203ENST00000444942 GATCO43716 136 aaKnown RBP6.87□□□□□ -1.31
LINC00642-203ENST00000444942 PSG9Q00887 426 aa6.87□□□□□ -1.31
LINC00642-203ENST00000444942 ACTL10Q5JWF8 245 aa6.87□□□□□ -1.31
LINC00642-203ENST00000444942 FAM231DQ6ZW35 169 aa6.87□□□□□ -1.31
LINC00642-203ENST00000444942 Q86TA4 180 aa6.87□□□□□ -1.31
LINC00642-203ENST00000444942 NHLRC2Q8NBF2 726 aa6.87□□□□□ -1.31
LINC00642-203ENST00000444942 GPR82Q96P67 336 aa6.87□□□□□ -1.31
LINC00642-203ENST00000444942 RNASE7Q9H1E1 156 aaKnown RBP6.87□□□□□ -1.31
LINC00642-203ENST00000444942 AAMDCQ9H7C9 122 aa6.87□□□□□ -1.31
LINC00642-203ENST00000444942 TRAV25A0A0B4J276 109 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 TRBV6-1A0A0K0K1D8 114 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 LTAP01374 205 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 S100A8P05109 93 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 BMI1P35226 326 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 ZNF124Q15973 351 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 PRR27Q6MZM9 219 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 SIGLEC15Q6ZMC9 328 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 GOLT1AQ6ZVE7 132 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 OR8I2Q8N0Y5 310 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 EXOC3-AS1Q8N2X6 119 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 SPAG8Q99932 426 aaPredicted RBP6.86□□□□□ -1.31
LINC00642-203ENST00000444942 TRAPPC1Q9Y5R8 145 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 PKD1P98161 4303 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 DNAH17Q9UFH2 4485 aa6.86□□□□□ -1.31
LINC00642-203ENST00000444942 A0A1B0GVY2 172 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 SERTM2A0A1B0GWG4 89 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 A0A1W2PS18 150 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 OR4C46A6NHA9 309 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 PHOX2AO14813 284 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 ZNF253O75346 499 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 HOXA5P20719 270 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 CSN1S1P47710 185 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 PAFAH1B2P68402 229 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 COX19Q49B96 90 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 APRG1Q8IVJ8 170 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 TMEM75Q8N9X5 138 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 GRAMD2BQ96HH9 432 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 MS4A6AQ9H2W1 248 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 C19orf73Q9NVV2 129 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 ZNF492Q9P255 531 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 DNAH6Q9C0G6 4158 aa6.85□□□□□ -1.31
LINC00642-203ENST00000444942 A0A087X0K7 114 aa6.84□□□□□ -1.31
LINC00642-203ENST00000444942 SMIM27A0A1W2PRY6 76 aa6.84□□□□□ -1.31
LINC00642-203ENST00000444942 RPL35AP18077 110 aaKnown RBP6.84□□□□□ -1.31
LINC00642-203ENST00000444942 WDR73Q6P4I2 378 aa6.84□□□□□ -1.31
LINC00642-203ENST00000444942 C16orf54Q6UWD8 224 aa6.84□□□□□ -1.31
LINC00642-203ENST00000444942 PRNTQ86SH4 94 aa6.84□□□□□ -1.31
LINC00642-203ENST00000444942 TMEM183AQ8IXX5 376 aa6.84□□□□□ -1.31
LINC00642-203ENST00000444942 DAZAP1Q96EP5 407 aaKnown RBP6.84□□□□□ -1.31
LINC00642-203ENST00000444942 SGK494Q96LW2 274 aa6.84□□□□□ -1.31
LINC00642-203ENST00000444942 C17orf77Q96MU5 243 aa6.84□□□□□ -1.31
LINC00642-203ENST00000444942 RETNQ9HD89 108 aa6.84□□□□□ -1.31
LINC00642-203ENST00000444942 FBLL1A6NHQ2 334 aaKnown RBP6.83□□□□□ -1.32
LINC00642-203ENST00000444942 DIRC3C9JPN6 131 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 P01737 135 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 MT-ND6P03923 174 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 ZNF688P0C7X2 276 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 S100A2P29034 98 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 TCL1AP56279 114 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 DEFB131AP59861 70 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 PSG3Q16557 428 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 ODF3L2Q3SX64 289 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 C1orf194Q5T5A4 169 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 LINC00518Q8N0U6 118 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 ARL6IP6Q8N6S5 226 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 NUDT10Q8NFP7 164 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 GLMPQ8WWB7 406 aa6.83□□□□□ -1.32
LINC00642-203ENST00000444942 NUDT11Q96G61 164 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms