RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 TPPP3Q9BW30 176 aa14.28□□□□□ -0.12
SEMA3D-202ENST00000444867 SAMD10Q9BYL1 202 aa14.28□□□□□ -0.12
SEMA3D-202ENST00000444867 OTOGQ6ZRI0 2925 aa14.28□□□□□ -0.12
SEMA3D-202ENST00000444867 ITPR3Q14573 2671 aa14.28□□□□□ -0.12
SEMA3D-202ENST00000444867 TRBV7-9A0A0J9YWB2 115 aa14.27□□□□□ -0.12
SEMA3D-202ENST00000444867 SCGB2A2Q13296 93 aa14.27□□□□□ -0.12
SEMA3D-202ENST00000444867 DNAJC9-AS1A6NH13 148 aa14.26□□□□□ -0.13
SEMA3D-202ENST00000444867 GPX1P07203 203 aa14.26□□□□□ -0.13
SEMA3D-202ENST00000444867 DMRTA1Q5VZB9 504 aa14.26□□□□□ -0.13
SEMA3D-202ENST00000444867 RCHY1Q96PM5 261 aa14.26□□□□□ -0.13
SEMA3D-202ENST00000444867 YAE1D1Q9NRH1 226 aa14.26□□□□□ -0.13
SEMA3D-202ENST00000444867 GSN-AS1Q9NRJ2 163 aa14.26□□□□□ -0.13
SEMA3D-202ENST00000444867 FAM181BA6NEQ2 426 aa14.26□□□□□ -0.13
SEMA3D-202ENST00000444867 HOXD3P31249 432 aaPredicted RBP14.26□□□□□ -0.13
SEMA3D-202ENST00000444867 OR8A1Q8NGG7 326 aa14.26□□□□□ -0.13
SEMA3D-202ENST00000444867 MAST4O15021 2626 aa14.25□□□□□ -0.13
SEMA3D-202ENST00000444867 MYO9AB2RTY4 2548 aa14.25□□□□□ -0.13
SEMA3D-202ENST00000444867 ZNF324O75467 553 aaPredicted RBP14.25□□□□□ -0.13
SEMA3D-202ENST00000444867 SYNJ2BPP57105 145 aa14.25□□□□□ -0.13
SEMA3D-202ENST00000444867 IQCJQ1A5X6 159 aa14.25□□□□□ -0.13
SEMA3D-202ENST00000444867 ZNF575Q86XF7 245 aa14.25□□□□□ -0.13
SEMA3D-202ENST00000444867 DCANP1Q8TF63 244 aa14.25□□□□□ -0.13
SEMA3D-202ENST00000444867 CNFNQ9BYD5 112 aa14.25□□□□□ -0.13
SEMA3D-202ENST00000444867 EDN2P20800 178 aa14.24□□□□□ -0.13
SEMA3D-202ENST00000444867 CDPF1Q6NVV7 123 aa14.24□□□□□ -0.13
SEMA3D-202ENST00000444867 Q6ZSV7 163 aa14.24□□□□□ -0.13
SEMA3D-202ENST00000444867 C4orf3Q8WVX3 66 aa14.24□□□□□ -0.13
SEMA3D-202ENST00000444867 FAM19A4Q96LR4 140 aa14.24□□□□□ -0.13
SEMA3D-202ENST00000444867 IGKV3-7A0A075B6H7 116 aa14.23□□□□□ -0.13
SEMA3D-202ENST00000444867 AMTP48728 403 aa14.23□□□□□ -0.13
SEMA3D-202ENST00000444867 WFDC12Q8WWY7 111 aa14.23□□□□□ -0.13
SEMA3D-202ENST00000444867 IGKV3D-20A0A0C4DH25 116 aa14.23□□□□□ -0.13
SEMA3D-202ENST00000444867 M0QZ24 198 aa14.23□□□□□ -0.13
SEMA3D-202ENST00000444867 APRG1Q8IVJ8 170 aa14.23□□□□□ -0.13
SEMA3D-202ENST00000444867 TMEM160Q9NX00 188 aa14.23□□□□□ -0.13
SEMA3D-202ENST00000444867 C2orf70A6NJV1 201 aa14.22□□□□□ -0.13
SEMA3D-202ENST00000444867 LINC01619G3V211 115 aa14.22□□□□□ -0.13
SEMA3D-202ENST00000444867 ZNF705DP0CH99 300 aaPredicted RBP14.22□□□□□ -0.13
SEMA3D-202ENST00000444867 ZNF705BP0CI00 300 aaPredicted RBP14.22□□□□□ -0.13
SEMA3D-202ENST00000444867 Q6ZWC4 215 aa14.22□□□□□ -0.13
SEMA3D-202ENST00000444867 ZFAND2AQ8N6M9 145 aa14.22□□□□□ -0.13
SEMA3D-202ENST00000444867 CHCHD1Q96BP2 118 aaKnown RBP14.22□□□□□ -0.13
SEMA3D-202ENST00000444867 MS4A6AQ9H2W1 248 aa14.22□□□□□ -0.13
SEMA3D-202ENST00000444867 TRAV21A0A0B4J279 112 aa14.21□□□□□ -0.13
SEMA3D-202ENST00000444867 HSBP1O75506 76 aa14.21□□□□□ -0.13
SEMA3D-202ENST00000444867 FAM104BQ5XKR9 115 aa14.21□□□□□ -0.13
SEMA3D-202ENST00000444867 C11orf21Q9P2W6 132 aa14.21□□□□□ -0.13
SEMA3D-202ENST00000444867 SRD5A1P18405 259 aa14.2□□□□□ -0.14
SEMA3D-202ENST00000444867 PMCHP20382 165 aa14.2□□□□□ -0.14
SEMA3D-202ENST00000444867 TWIST1Q15672 202 aa14.2□□□□□ -0.14
SEMA3D-202ENST00000444867 NIT1Q86X76 327 aa14.2□□□□□ -0.14
SEMA3D-202ENST00000444867 MXRA5Q9NR99 2828 aa14.2□□□□□ -0.14
SEMA3D-202ENST00000444867 K7EQG2 157 aa14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 SCGB1D1O95968 90 aa14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 NTF3P20783 257 aa14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 SNRPD3P62318 126 aaKnown RBP14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 RNASEKQ6P5S7 137 aaKnown RBP14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 DPF1Q92782 380 aa14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 TMEM191AQ9H0A3 160 aa14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 ESM1Q9NQ30 184 aa14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 NAGKQ9UJ70 344 aa14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 U3KQK5 164 aa14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 RNASE1P07998 156 aaKnown RBP14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 TCTEX1D4Q5JR98 221 aa14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 PRR9Q5T870 116 aa14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 PEMTQ9UBM1 199 aa14.19□□□□□ -0.14
SEMA3D-202ENST00000444867 OR5AL1P0C617 328 aa14.18□□□□□ -0.14
SEMA3D-202ENST00000444867 PRR31Q5SQ13 230 aa14.18□□□□□ -0.14
SEMA3D-202ENST00000444867 WFDC3Q8IUB2 231 aa14.18□□□□□ -0.14
SEMA3D-202ENST00000444867 URB1-AS1Q96HZ7 61 aa14.18□□□□□ -0.14
SEMA3D-202ENST00000444867 ODF3Q96PU9 254 aa14.18□□□□□ -0.14
SEMA3D-202ENST00000444867 F6UB75 175 aa14.17□□□□□ -0.14
SEMA3D-202ENST00000444867 CACNG7P62955 275 aa14.17□□□□□ -0.14
SEMA3D-202ENST00000444867 C18orf65Q6ZTR6 163 aa14.17□□□□□ -0.14
SEMA3D-202ENST00000444867 OR1N2Q8NGR9 330 aa14.17□□□□□ -0.14
SEMA3D-202ENST00000444867 ZNF469Q96JG9 3925 aaPredicted RBP14.17□□□□□ -0.14
SEMA3D-202ENST00000444867 SNAI2O43623 268 aa14.16□□□□□ -0.14
SEMA3D-202ENST00000444867 RAB4AP20338 218 aa14.16□□□□□ -0.14
SEMA3D-202ENST00000444867 SLURP1P55000 103 aa14.16□□□□□ -0.14
SEMA3D-202ENST00000444867 DEFB1P60022 68 aa14.16□□□□□ -0.14
SEMA3D-202ENST00000444867 PKIAP61925 76 aa14.16□□□□□ -0.14
SEMA3D-202ENST00000444867 OR11H1Q8NG94 326 aa14.16□□□□□ -0.14
SEMA3D-202ENST00000444867 C16orf95Q9H693 158 aa14.16□□□□□ -0.14
SEMA3D-202ENST00000444867 FLNAP21333 2647 aaKnown RBP14.16□□□□□ -0.14
SEMA3D-202ENST00000444867 IGHV4-4A0A075B6R2 117 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 M0R2Z0 102 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 LINC00614P0C842 121 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 DEFB136Q30KP8 78 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 KHDC1LQ5JSQ8 128 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 AMN1Q8IY45 258 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 ORMDL3Q8N138 153 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 FAM19A2Q8N3H0 131 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 SELENOKQ9Y6D0 94 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 TRAV2A0A0B4J234 112 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 MUC21A0A0G2JKD1 596 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 MUC21A0A140T8X8 626 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 KLLNB2CW77 178 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 MRPL51Q4U2R6 128 aaKnown RBP14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 MUC21Q5SSG8 566 aa14.15□□□□□ -0.14
SEMA3D-202ENST00000444867 KLHL30-AS1Q8NEE0 82 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms