RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ICOSQ9Y6W8 199 aa14.49□□□□□ -0.09
VSX1-206ENST00000444511 PET100P0DJ07 73 aa14.48□□□□□ -0.09
VSX1-206ENST00000444511 IFITM3Q01628 133 aa14.48□□□□□ -0.09
VSX1-206ENST00000444511 ZNF415Q09FC8 603 aa14.48□□□□□ -0.09
VSX1-206ENST00000444511 FFAR4Q5NUL3 377 aa14.48□□□□□ -0.09
VSX1-206ENST00000444511 LYPD1Q8N2G4 141 aa14.48□□□□□ -0.09
VSX1-206ENST00000444511 RBAKDNA6NC62 111 aa14.47□□□□□ -0.09
VSX1-206ENST00000444511 SSNA1O43805 119 aa14.47□□□□□ -0.09
VSX1-206ENST00000444511 SLAQ13239 276 aa14.47□□□□□ -0.09
VSX1-206ENST00000444511 SCGB1C1Q8TD33 95 aa14.47□□□□□ -0.09
VSX1-206ENST00000444511 KRTAP4-5Q9BYR2 181 aa14.47□□□□□ -0.09
VSX1-206ENST00000444511 PRO0255Q9UI72 69 aa14.47□□□□□ -0.09
VSX1-206ENST00000444511 HSPB11Q9Y547 144 aa14.47□□□□□ -0.09
VSX1-206ENST00000444511 ABCA13Q86UQ4 5058 aa14.47□□□□□ -0.09
VSX1-206ENST00000444511 SIVA1O15304 175 aa14.46□□□□□ -0.09
VSX1-206ENST00000444511 IFNA5P01569 189 aa14.46□□□□□ -0.09
VSX1-206ENST00000444511 TAS2R45P59539 299 aa14.46□□□□□ -0.09
VSX1-206ENST00000444511 ZNF266Q14584 549 aa14.46□□□□□ -0.09
VSX1-206ENST00000444511 KHDC3LQ587J8 217 aa14.46□□□□□ -0.09
VSX1-206ENST00000444511 MUC21Q5SSG8 566 aa14.46□□□□□ -0.09
VSX1-206ENST00000444511 MARVELD1Q9BSK0 173 aa14.46□□□□□ -0.09
VSX1-206ENST00000444511 MPC2O95563 127 aa14.45□□□□□ -0.1
VSX1-206ENST00000444511 MAPKAPK5-AS1Q8N8E1 139 aa14.45□□□□□ -0.1
VSX1-206ENST00000444511 SMIM3Q9BZL3 60 aa14.45□□□□□ -0.1
VSX1-206ENST00000444511 HHLA3Q9XRX5 114 aa14.45□□□□□ -0.1
VSX1-206ENST00000444511 NXPH4O95158 308 aa14.44□□□□□ -0.1
VSX1-206ENST00000444511 RPL12P30050 165 aaKnown RBP14.44□□□□□ -0.1
VSX1-206ENST00000444511 CRYBA4P53673 196 aa14.44□□□□□ -0.1
VSX1-206ENST00000444511 LINC00315P59091 139 aa14.44□□□□□ -0.1
VSX1-206ENST00000444511 C8orf49Q96NF6 230 aa14.44□□□□□ -0.1
VSX1-206ENST00000444511 DIRC3C9JPN6 131 aa14.43□□□□□ -0.1
VSX1-206ENST00000444511 FHL2Q14192 279 aa14.43□□□□□ -0.1
VSX1-206ENST00000444511 MRPL23Q16540 153 aaKnown RBP14.43□□□□□ -0.1
VSX1-206ENST00000444511 HYLS1Q96M11 299 aa14.43□□□□□ -0.1
VSX1-206ENST00000444511 PTTG2Q9NZH5 202 aa14.43□□□□□ -0.1
VSX1-206ENST00000444511 MDFICQ9P1T7 246 aa14.43□□□□□ -0.1
VSX1-206ENST00000444511 LENEPQ9Y5L5 61 aa14.43□□□□□ -0.1
VSX1-206ENST00000444511 TRGV4A0A0C4DH28 118 aa14.42□□□□□ -0.1
VSX1-206ENST00000444511 DEFA1P59665 94 aa14.42□□□□□ -0.1
VSX1-206ENST00000444511 DEFA3P59666 94 aa14.42□□□□□ -0.1
VSX1-206ENST00000444511 FAM159AQ6UWV7 190 aa14.42□□□□□ -0.1
VSX1-206ENST00000444511 LRP1BQ9NZR2 4599 aa14.42□□□□□ -0.1
VSX1-206ENST00000444511 HSPG2P98160 4391 aa14.42□□□□□ -0.1
VSX1-206ENST00000444511 TRGV11A0A075B6L2 103 aa14.41□□□□□ -0.1
VSX1-206ENST00000444511 KRTAP10-2P60368 255 aa14.41□□□□□ -0.1
VSX1-206ENST00000444511 TMEM183BQ1AE95 376 aa14.41□□□□□ -0.1
VSX1-206ENST00000444511 Q6AWC8 147 aa14.41□□□□□ -0.1
VSX1-206ENST00000444511 TMEM183AQ8IXX5 376 aa14.41□□□□□ -0.1
VSX1-206ENST00000444511 CMTM2Q8TAZ6 248 aa14.41□□□□□ -0.1
VSX1-206ENST00000444511 MBD2Q9UBB5 411 aa14.41□□□□□ -0.1
VSX1-206ENST00000444511 RPH3ALQ9UNE2 315 aa14.41□□□□□ -0.1
VSX1-206ENST00000444511 EIF3GO75821 320 aaKnown RBP eCLIP14.4□□□□□ -0.1
VSX1-206ENST00000444511 FAM74A1Q5RGS3 127 aa14.4□□□□□ -0.1
VSX1-206ENST00000444511 LYPD5Q6UWN5 251 aa14.4□□□□□ -0.1
VSX1-206ENST00000444511 NEGR1Q7Z3B1 354 aa14.4□□□□□ -0.1
VSX1-206ENST00000444511 SPXQ9BT56 116 aa14.4□□□□□ -0.1
VSX1-206ENST00000444511 OTORQ9NRC9 128 aa14.4□□□□□ -0.1
VSX1-206ENST00000444511 NAGKQ9UJ70 344 aa14.4□□□□□ -0.1
VSX1-206ENST00000444511 PGPA6NDG6 321 aa14.39□□□□□ -0.11
VSX1-206ENST00000444511 A6NHS1 94 aa14.39□□□□□ -0.11
VSX1-206ENST00000444511 SFTA3P0C7M3 94 aa14.39□□□□□ -0.11
VSX1-206ENST00000444511 ACOT6Q3I5F7 207 aaPredicted RBP14.39□□□□□ -0.11
VSX1-206ENST00000444511 TMED6Q8WW62 240 aa14.39□□□□□ -0.11
VSX1-206ENST00000444511 ZNF479Q96JC4 524 aa14.39□□□□□ -0.11
VSX1-206ENST00000444511 A0A1W2PPV4 95 aa14.38□□□□□ -0.11
VSX1-206ENST00000444511 Q6ZRN7 208 aaPredicted RBP14.38□□□□□ -0.11
VSX1-206ENST00000444511 OR10G4Q8NGN3 311 aa14.38□□□□□ -0.11
VSX1-206ENST00000444511 PCNPQ8WW12 178 aaKnown RBP14.38□□□□□ -0.11
VSX1-206ENST00000444511 RASL10AQ92737 203 aa14.38□□□□□ -0.11
VSX1-206ENST00000444511 SRIP30626 198 aa14.37□□□□□ -0.11
VSX1-206ENST00000444511 PQLC2Q6ZP29 291 aa14.37□□□□□ -0.11
VSX1-206ENST00000444511 GOLT1AQ6ZVE7 132 aa14.37□□□□□ -0.11
VSX1-206ENST00000444511 IQCF2Q8IXL9 164 aa14.37□□□□□ -0.11
VSX1-206ENST00000444511 WFDC1Q9HC57 220 aa14.37□□□□□ -0.11
VSX1-206ENST00000444511 TRAV9-2A0A087WT02 112 aa14.35□□□□□ -0.11
VSX1-206ENST00000444511 K7EQD1 137 aa14.35□□□□□ -0.11
VSX1-206ENST00000444511 EREGO14944 169 aa14.35□□□□□ -0.11
VSX1-206ENST00000444511 ORM1P02763 201 aa14.35□□□□□ -0.11
VSX1-206ENST00000444511 GYPEP15421 78 aa14.35□□□□□ -0.11
VSX1-206ENST00000444511 RAB2AP61019 212 aa14.35□□□□□ -0.11
VSX1-206ENST00000444511 TDRG1Q3Y452 100 aa14.35□□□□□ -0.11
VSX1-206ENST00000444511 Q8N1X5 172 aa14.35□□□□□ -0.11
VSX1-206ENST00000444511 LY96Q9Y6Y9 160 aa14.35□□□□□ -0.11
VSX1-206ENST00000444511 TRAV21A0A0B4J279 112 aa14.34□□□□□ -0.11
VSX1-206ENST00000444511 ERVFC1-1P60608 527 aa14.34□□□□□ -0.11
VSX1-206ENST00000444511 NFE4Q86UQ8 179 aa14.34□□□□□ -0.11
VSX1-206ENST00000444511 ARL6IP6Q8N6S5 226 aa14.34□□□□□ -0.11
VSX1-206ENST00000444511 TREM1Q9NP99 234 aa14.34□□□□□ -0.11
VSX1-206ENST00000444511 TNFRSF18Q9Y5U5 241 aa14.34□□□□□ -0.11
VSX1-206ENST00000444511 TRAV4A0A0B4J268 109 aa14.33□□□□□ -0.12
VSX1-206ENST00000444511 F6UZH7 168 aa14.33□□□□□ -0.12
VSX1-206ENST00000444511 HMGB3O15347 200 aaKnown RBP14.33□□□□□ -0.12
VSX1-206ENST00000444511 GNRH2O43555 120 aa14.33□□□□□ -0.12
VSX1-206ENST00000444511 OR4C5Q8NGB2 326 aa14.33□□□□□ -0.12
VSX1-206ENST00000444511 OR10G9Q8NGN4 311 aa14.33□□□□□ -0.12
VSX1-206ENST00000444511 OR10G7Q8NGN6 311 aa14.33□□□□□ -0.12
VSX1-206ENST00000444511 SCRT2Q9NQ03 307 aa14.33□□□□□ -0.12
VSX1-206ENST00000444511 DNAH5Q8TE73 4624 aa14.32□□□□□ -0.12
VSX1-206ENST00000444511 TRAV8-1A0A0A6YYK1 113 aa14.32□□□□□ -0.12
VSX1-206ENST00000444511 IGHV3-16A0A0C4DH30 117 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms