RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 GFI1BQ5VTD9 330 aa11.5□□□□□ -0.57
USP40-206ENST00000443711 RNF183Q96D59 192 aa11.5□□□□□ -0.57
USP40-206ENST00000443711 TP53TG1Q9Y2A0 90 aa11.5□□□□□ -0.57
USP40-206ENST00000443711 GOLT1BQ9Y3E0 138 aa11.5□□□□□ -0.57
USP40-206ENST00000443711 TRAV12-3A0A0B4J271 114 aa11.49□□□□□ -0.57
USP40-206ENST00000443711 LINC00862A6NCI5 91 aa11.49□□□□□ -0.57
USP40-206ENST00000443711 SPRY2O43597 315 aa11.49□□□□□ -0.57
USP40-206ENST00000443711 BTN1A1Q13410 526 aa11.49□□□□□ -0.57
USP40-206ENST00000443711 TMEM256Q8N2U0 113 aa11.49□□□□□ -0.57
USP40-206ENST00000443711 C8orf49Q96NF6 230 aa11.49□□□□□ -0.57
USP40-206ENST00000443711 SPATA25Q9BR10 227 aa11.49□□□□□ -0.57
USP40-206ENST00000443711 TM2D3Q9BRN9 247 aa11.49□□□□□ -0.57
USP40-206ENST00000443711 PARLQ9H300 379 aa11.49□□□□□ -0.57
USP40-206ENST00000443711 C9JQL5 133 aa11.48□□□□□ -0.57
USP40-206ENST00000443711 NHLRC4P0CG21 123 aaPredicted RBP11.48□□□□□ -0.57
USP40-206ENST00000443711 GNG4P50150 75 aa11.48□□□□□ -0.57
USP40-206ENST00000443711 ZNF674Q2M3X9 581 aa11.48□□□□□ -0.57
USP40-206ENST00000443711 CENPWQ5EE01 88 aa11.48□□□□□ -0.57
USP40-206ENST00000443711 PRR9Q5T870 116 aa11.48□□□□□ -0.57
USP40-206ENST00000443711 TMEM183AQ8IXX5 376 aa11.48□□□□□ -0.57
USP40-206ENST00000443711 C1orf158Q8N1D5 194 aa11.48□□□□□ -0.57
USP40-206ENST00000443711 NIPSNAP3BQ9BS92 247 aa11.48□□□□□ -0.57
USP40-206ENST00000443711 TMEM208Q9BTX3 173 aa11.48□□□□□ -0.57
USP40-206ENST00000443711 ZMAT4Q9H898 229 aa11.48□□□□□ -0.57
USP40-206ENST00000443711 IGHV3OR16-12A0A075B7B8 117 aa11.47□□□□□ -0.57
USP40-206ENST00000443711 ZNF324O75467 553 aaPredicted RBP11.47□□□□□ -0.57
USP40-206ENST00000443711 Q6AWC8 147 aa11.47□□□□□ -0.57
USP40-206ENST00000443711 COX8CQ7Z4L0 72 aa11.47□□□□□ -0.57
USP40-206ENST00000443711 COMMD7Q86VX2 200 aa11.47□□□□□ -0.57
USP40-206ENST00000443711 LINC01587Q99440 93 aa11.47□□□□□ -0.57
USP40-206ENST00000443711 OVOL2Q9BRP0 275 aa11.47□□□□□ -0.57
USP40-206ENST00000443711 NBEAL2Q6ZNJ1 2754 aa11.47□□□□□ -0.57
USP40-206ENST00000443711 TRAV21A0A0B4J279 112 aa11.46□□□□□ -0.57
USP40-206ENST00000443711 C9JCJ5 164 aa11.46□□□□□ -0.57
USP40-206ENST00000443711 H7BYZ3 331 aa11.46□□□□□ -0.57
USP40-206ENST00000443711 GCGP01275 180 aa11.46□□□□□ -0.57
USP40-206ENST00000443711 RBMY1A1P0DJD3 496 aaKnown RBP11.46□□□□□ -0.57
USP40-206ENST00000443711 RBMY1CP0DJD4 496 aa11.46□□□□□ -0.57
USP40-206ENST00000443711 RBMY1FQ15415 496 aaKnown RBP11.46□□□□□ -0.57
USP40-206ENST00000443711 FAM74A3Q4VXF1 159 aa11.46□□□□□ -0.57
USP40-206ENST00000443711 UQCC3Q6UW78 93 aa11.46□□□□□ -0.57
USP40-206ENST00000443711 ZNF705AQ6ZN79 300 aaPredicted RBP11.46□□□□□ -0.57
USP40-206ENST00000443711 OR11H2Q8NH07 326 aa11.46□□□□□ -0.57
USP40-206ENST00000443711 SMIM12Q96EX1 92 aa11.46□□□□□ -0.57
USP40-206ENST00000443711 SMIM7Q9BQ49 75 aa11.46□□□□□ -0.57
USP40-206ENST00000443711 MLST8Q9BVC4 326 aa11.46□□□□□ -0.57
USP40-206ENST00000443711 RETNQ9HD89 108 aa11.46□□□□□ -0.57
USP40-206ENST00000443711 TRBV20OR9-2A0A075B6H5 130 aa11.45□□□□□ -0.58
USP40-206ENST00000443711 FABP5P3A8MUU1 101 aa11.45□□□□□ -0.58
USP40-206ENST00000443711 ZNF727A8MUV8 499 aa11.45□□□□□ -0.58
USP40-206ENST00000443711 ZNF80P51504 273 aaPredicted RBP11.45□□□□□ -0.58
USP40-206ENST00000443711 SOHLH1Q5JUK2 328 aa11.45□□□□□ -0.58
USP40-206ENST00000443711 EIF4E3Q8N5X7 224 aaKnown RBP11.45□□□□□ -0.58
USP40-206ENST00000443711 NHLRC2Q8NBF2 726 aa11.45□□□□□ -0.58
USP40-206ENST00000443711 ZC2HC1AQ96GY0 325 aa11.45□□□□□ -0.58
USP40-206ENST00000443711 NEU1Q99519 415 aa11.45□□□□□ -0.58
USP40-206ENST00000443711 SMIM9A6NGZ8 99 aa11.44□□□□□ -0.58
USP40-206ENST00000443711 IGLV2-8P01709 118 aa11.44□□□□□ -0.58
USP40-206ENST00000443711 PFN1P07737 140 aaKnown RBP11.44□□□□□ -0.58
USP40-206ENST00000443711 FAM162BQ5T6X4 162 aa11.44□□□□□ -0.58
USP40-206ENST00000443711 PYGO2Q9BRQ0 406 aa11.44□□□□□ -0.58
USP40-206ENST00000443711 BIN3Q9NQY0 253 aa11.44□□□□□ -0.58
USP40-206ENST00000443711 MGST1P10620 155 aaKnown RBP11.43□□□□□ -0.58
USP40-206ENST00000443711 Q6ZQT7 251 aa11.43□□□□□ -0.58
USP40-206ENST00000443711 OCC1Q8TAD7 63 aa11.43□□□□□ -0.58
USP40-206ENST00000443711 LINC00467Q9BRT7 94 aa11.43□□□□□ -0.58
USP40-206ENST00000443711 LY96Q9Y6Y9 160 aa11.43□□□□□ -0.58
USP40-206ENST00000443711 X6R8D5 127 aa11.43□□□□□ -0.58
USP40-206ENST00000443711 IGHV1OR15-1A0A075B7D0 117 aa11.42□□□□□ -0.58
USP40-206ENST00000443711 PGPEP1LA6NFU8 196 aa11.42□□□□□ -0.58
USP40-206ENST00000443711 ZNF705GA8MUZ8 300 aaPredicted RBP11.42□□□□□ -0.58
USP40-206ENST00000443711 SFTA3P0C7M3 94 aa11.42□□□□□ -0.58
USP40-206ENST00000443711 MIFP14174 115 aa11.42□□□□□ -0.58
USP40-206ENST00000443711 HTN1P15515 57 aa11.42□□□□□ -0.58
USP40-206ENST00000443711 CRIP1P50238 77 aa11.42□□□□□ -0.58
USP40-206ENST00000443711 TMEM241Q24JQ0 296 aa11.42□□□□□ -0.58
USP40-206ENST00000443711 RRN3P1Q2M238 152 aa11.42□□□□□ -0.58
USP40-206ENST00000443711 FAM159AQ6UWV7 190 aa11.42□□□□□ -0.58
USP40-206ENST00000443711 SH2D1AO60880 128 aa11.41□□□□□ -0.58
USP40-206ENST00000443711 MUC21Q5SSG8 566 aa11.41□□□□□ -0.58
USP40-206ENST00000443711 PRR27Q6MZM9 219 aa11.41□□□□□ -0.58
USP40-206ENST00000443711 KCNS1Q96KK3 526 aa11.41□□□□□ -0.58
USP40-206ENST00000443711 CBY3A6NI87 242 aa11.4□□□□□ -0.58
USP40-206ENST00000443711 DAZAP1Q96EP5 407 aaKnown RBP11.4□□□□□ -0.58
USP40-206ENST00000443711 NAT8Q9UHE5 227 aa11.4□□□□□ -0.58
USP40-206ENST00000443711 NAGKQ9UJ70 344 aa11.4□□□□□ -0.58
USP40-206ENST00000443711 TMEM218A2RU14 115 aa11.39□□□□□ -0.59
USP40-206ENST00000443711 ORM1P02763 201 aa11.39□□□□□ -0.59
USP40-206ENST00000443711 AZU1P20160 251 aa11.39□□□□□ -0.59
USP40-206ENST00000443711 TDRG1Q3Y452 100 aa11.39□□□□□ -0.59
USP40-206ENST00000443711 ANXA2RQ3ZCQ2 193 aa11.39□□□□□ -0.59
USP40-206ENST00000443711 ZNF493Q6ZR52 646 aa11.39□□□□□ -0.59
USP40-206ENST00000443711 SDF2L1Q9HCN8 221 aa11.39□□□□□ -0.59
USP40-206ENST00000443711 C11orf21Q9P2W6 132 aa11.39□□□□□ -0.59
USP40-206ENST00000443711 IGHV4-28A0A0C4DH34 117 aa11.38□□□□□ -0.59
USP40-206ENST00000443711 K7EN84 100 aa11.38□□□□□ -0.59
USP40-206ENST00000443711 PRM2P04554 102 aa11.38□□□□□ -0.59
USP40-206ENST00000443711 OR5I1Q13606 314 aa11.38□□□□□ -0.59
USP40-206ENST00000443711 LINC01551Q86U37 167 aa11.38□□□□□ -0.59
USP40-206ENST00000443711 Q8NAQ8 132 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms