RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ZFAND6Q6FIF0 208 aa11.48□□□□□ -0.57
USP39-205ENST00000442708 TMEM75Q8N9X5 138 aa11.48□□□□□ -0.57
USP39-205ENST00000442708 C8orf49Q96NF6 230 aa11.48□□□□□ -0.57
USP39-205ENST00000442708 TENM2Q9NT68 2774 aa11.47□□□□□ -0.57
USP39-205ENST00000442708 FLI1Q01543 452 aaPredicted RBP11.47□□□□□ -0.57
USP39-205ENST00000442708 PRNTQ86SH4 94 aa11.47□□□□□ -0.57
USP39-205ENST00000442708 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
USP39-205ENST00000442708 SCO2A0A1W2PP80 73 aa11.46□□□□□ -0.57
USP39-205ENST00000442708 K7EQM0 130 aa11.46□□□□□ -0.57
USP39-205ENST00000442708 PPT1P50897 306 aa11.46□□□□□ -0.57
USP39-205ENST00000442708 Q6AWC8 147 aa11.46□□□□□ -0.57
USP39-205ENST00000442708 ZNF767PQ75MW2 155 aa11.46□□□□□ -0.57
USP39-205ENST00000442708 C11orf45Q8TAV5 145 aa11.46□□□□□ -0.57
USP39-205ENST00000442708 HIST1H2BAQ96A08 127 aa11.46□□□□□ -0.57
USP39-205ENST00000442708 TREM1Q9NP99 234 aa11.46□□□□□ -0.57
USP39-205ENST00000442708 TMEM189A5PLL7 270 aa11.45□□□□□ -0.58
USP39-205ENST00000442708 C11orf94C9JXX5 98 aa11.45□□□□□ -0.58
USP39-205ENST00000442708 ZNF80P51504 273 aaPredicted RBP11.45□□□□□ -0.58
USP39-205ENST00000442708 PMS2P11Q13670 270 aa11.45□□□□□ -0.58
USP39-205ENST00000442708 FAM222AQ5U5X8 452 aa11.45□□□□□ -0.58
USP39-205ENST00000442708 Q86TA4 180 aa11.45□□□□□ -0.58
USP39-205ENST00000442708 RNASE8Q8TDE3 154 aaKnown RBP11.45□□□□□ -0.58
USP39-205ENST00000442708 PYGO2Q9BRQ0 406 aa11.45□□□□□ -0.58
USP39-205ENST00000442708 MANBALQ9NQG1 85 aa11.45□□□□□ -0.58
USP39-205ENST00000442708 DKK2Q9UBU2 259 aa11.45□□□□□ -0.58
USP39-205ENST00000442708 TP53TG3Q9ULZ0 132 aa11.45□□□□□ -0.58
USP39-205ENST00000442708 KLF12Q9Y4X4 402 aa11.45□□□□□ -0.58
USP39-205ENST00000442708 CXorf65A6NEN9 183 aa11.44□□□□□ -0.58
USP39-205ENST00000442708 C3orf84H3BNL1 204 aa11.44□□□□□ -0.58
USP39-205ENST00000442708 C12orf74Q32Q52 190 aa11.44□□□□□ -0.58
USP39-205ENST00000442708 CASC10Q5T4H9 136 aa11.44□□□□□ -0.58
USP39-205ENST00000442708 LYPD6BQ8NI32 183 aa11.44□□□□□ -0.58
USP39-205ENST00000442708 C2CD4CQ8TF44 421 aa11.44□□□□□ -0.58
USP39-205ENST00000442708 LINC00467Q9BRT7 94 aa11.44□□□□□ -0.58
USP39-205ENST00000442708 TCEAL7Q9BRU2 100 aa11.44□□□□□ -0.58
USP39-205ENST00000442708 STARD9Q9P2P6 4700 aa11.44□□□□□ -0.58
USP39-205ENST00000442708 TEX46H3BTG2 121 aa11.43□□□□□ -0.58
USP39-205ENST00000442708 BLOC1S1P78537 153 aa11.43□□□□□ -0.58
USP39-205ENST00000442708 MUC21Q5SSG8 566 aa11.43□□□□□ -0.58
USP39-205ENST00000442708 TEX261Q6UWH6 196 aa11.43□□□□□ -0.58
USP39-205ENST00000442708 TMEM263Q8WUH6 116 aaKnown RBP11.43□□□□□ -0.58
USP39-205ENST00000442708 C16orf74Q96GX8 76 aa11.43□□□□□ -0.58
USP39-205ENST00000442708 IGHV1OR15-1A0A075B7D0 117 aa11.42□□□□□ -0.58
USP39-205ENST00000442708 FBLL1A6NHQ2 334 aaKnown RBP11.42□□□□□ -0.58
USP39-205ENST00000442708 RGS13O14921 159 aa11.42□□□□□ -0.58
USP39-205ENST00000442708 SPART-AS1P0CW21 52 aa11.42□□□□□ -0.58
USP39-205ENST00000442708 AKR1C3P42330 323 aa11.42□□□□□ -0.58
USP39-205ENST00000442708 Q6ZTC4 211 aa11.42□□□□□ -0.58
USP39-205ENST00000442708 C11orf72Q8NBR9 251 aa11.42□□□□□ -0.58
USP39-205ENST00000442708 PCNPQ8WW12 178 aaKnown RBP11.42□□□□□ -0.58
USP39-205ENST00000442708 FMC1Q96HJ9 113 aa11.42□□□□□ -0.58
USP39-205ENST00000442708 NDFIP1Q9BT67 221 aa11.42□□□□□ -0.58
USP39-205ENST00000442708 C11orf21Q9P2W6 132 aa11.42□□□□□ -0.58
USP39-205ENST00000442708 TRBV6-1A0A0K0K1D8 114 aa11.41□□□□□ -0.58
USP39-205ENST00000442708 CBY3A6NI87 242 aa11.41□□□□□ -0.58
USP39-205ENST00000442708 BCL2P10415 239 aa11.41□□□□□ -0.58
USP39-205ENST00000442708 TMEM183BQ1AE95 376 aa11.41□□□□□ -0.58
USP39-205ENST00000442708 ANXA2RQ3ZCQ2 193 aa11.41□□□□□ -0.58
USP39-205ENST00000442708 ZNF493Q6ZR52 646 aa11.41□□□□□ -0.58
USP39-205ENST00000442708 EIF4E3Q8N5X7 224 aaKnown RBP11.41□□□□□ -0.58
USP39-205ENST00000442708 ZNF680Q8NEM1 530 aa11.41□□□□□ -0.58
USP39-205ENST00000442708 PHLDA1Q8WV24 401 aaPredicted RBP11.41□□□□□ -0.58
USP39-205ENST00000442708 C11orf52Q96A22 123 aa11.41□□□□□ -0.58
USP39-205ENST00000442708 GCGP01275 180 aa11.4□□□□□ -0.58
USP39-205ENST00000442708 LTAP01374 205 aa11.4□□□□□ -0.58
USP39-205ENST00000442708 UBE2G1P62253 170 aa11.4□□□□□ -0.58
USP39-205ENST00000442708 MEF2BQ02080 365 aaPredicted RBP11.4□□□□□ -0.58
USP39-205ENST00000442708 SMUG1Q53HV7 270 aa11.4□□□□□ -0.58
USP39-205ENST00000442708 SAPCD1Q5SSQ6 148 aa11.4□□□□□ -0.58
USP39-205ENST00000442708 DERL1Q9BUN8 251 aa11.4□□□□□ -0.58
USP39-205ENST00000442708 NOP10Q9NPE3 64 aaKnown RBP11.4□□□□□ -0.58
USP39-205ENST00000442708 GSN-AS1Q9NRJ2 163 aa11.4□□□□□ -0.58
USP39-205ENST00000442708 VAX2Q9UIW0 290 aa11.4□□□□□ -0.58
USP39-205ENST00000442708 TRAV21A0A0B4J279 112 aa11.39□□□□□ -0.59
USP39-205ENST00000442708 IFNA1P01562 189 aa11.39□□□□□ -0.59
USP39-205ENST00000442708 CRIP1P50238 77 aa11.39□□□□□ -0.59
USP39-205ENST00000442708 ZC2HC1AQ96GY0 325 aa11.39□□□□□ -0.59
USP39-205ENST00000442708 NAGKQ9UJ70 344 aa11.39□□□□□ -0.59
USP39-205ENST00000442708 TIMM8BQ9Y5J9 83 aaPredicted RBP11.39□□□□□ -0.59
USP39-205ENST00000442708 LYRM9A8MSI8 78 aa11.38□□□□□ -0.59
USP39-205ENST00000442708 GNRH2O43555 120 aa11.38□□□□□ -0.59
USP39-205ENST00000442708 PFN1P07737 140 aaKnown RBP11.38□□□□□ -0.59
USP39-205ENST00000442708 TDRG1Q3Y452 100 aa11.38□□□□□ -0.59
USP39-205ENST00000442708 CEMP1Q6PRD7 247 aaPredicted RBP11.38□□□□□ -0.59
USP39-205ENST00000442708 COX8CQ7Z4L0 72 aa11.38□□□□□ -0.59
USP39-205ENST00000442708 NHLRC2Q8NBF2 726 aa11.38□□□□□ -0.59
USP39-205ENST00000442708 TXNDC17Q9BRA2 123 aa11.38□□□□□ -0.59
USP39-205ENST00000442708 MDFICQ9P1T7 246 aa11.38□□□□□ -0.59
USP39-205ENST00000442708 ZFP30Q9Y2G7 519 aa11.38□□□□□ -0.59
USP39-205ENST00000442708 DYNC2H1Q8NCM8 4307 aaKnown RBP11.38□□□□□ -0.59
USP39-205ENST00000442708 RBFOX3A6NFN3 312 aa11.37□□□□□ -0.59
USP39-205ENST00000442708 DEFB130BP0DP73 79 aa11.37□□□□□ -0.59
USP39-205ENST00000442708 DEFB130AP0DP74 79 aa11.37□□□□□ -0.59
USP39-205ENST00000442708 RPL35P42766 123 aaKnown RBP11.37□□□□□ -0.59
USP39-205ENST00000442708 FAM159AQ6UWV7 190 aa11.37□□□□□ -0.59
USP39-205ENST00000442708 TMEM183AQ8IXX5 376 aa11.37□□□□□ -0.59
USP39-205ENST00000442708 TEX48A0A1B0GUV7 120 aa11.36□□□□□ -0.59
USP39-205ENST00000442708 S100A9P06702 114 aaKnown RBP11.36□□□□□ -0.59
USP39-205ENST00000442708 TCL1AP56279 114 aa11.36□□□□□ -0.59
USP39-205ENST00000442708 DAD1P61803 113 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms