RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 Q6AWC8 147 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 ZFAND2AQ8N6M9 145 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 DYNLRB2Q8TF09 96 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 ODF3Q96PU9 254 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 TRAPPC1Q9Y5R8 145 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 BAHCC1Q9P281 2608 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 F6UB75 175 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST1H2BKO60814 126 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST1H2BJP06899 126 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST1H2BOP23527 126 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST1H2BBP33778 126 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST1H2BDP58876 126 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST1H2BCP62807 126 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST2H2BEQ16778 126 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 LINC01559Q495D7 138 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 PSMG4Q5JS54 123 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 TMEM61Q8N0U2 210 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST1H2BHQ93079 126 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST1H2BNQ99877 126 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 HIST1H2BMQ99879 126 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 SETXQ7Z333 2677 aaKnown RBP12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 F8P00451 2351 aa12.72□□□□□ -0.37
TMEM39B-203ENST00000441402 A0A0J9YX75 114 aa12.71□□□□□ -0.38
TMEM39B-203ENST00000441402 A0A1B0GXF2 115 aa12.71□□□□□ -0.38
TMEM39B-203ENST00000441402 TRGC1P0CF51 173 aa12.71□□□□□ -0.38
TMEM39B-203ENST00000441402 DEFB1P60022 68 aa12.71□□□□□ -0.38
TMEM39B-203ENST00000441402 FABP9Q0Z7S8 132 aa12.71□□□□□ -0.38
TMEM39B-203ENST00000441402 ZNF575Q86XF7 245 aa12.71□□□□□ -0.38
TMEM39B-203ENST00000441402 SPAG8Q99932 426 aaPredicted RBP12.71□□□□□ -0.38
TMEM39B-203ENST00000441402 SPINK4O60575 86 aa12.7□□□□□ -0.38
TMEM39B-203ENST00000441402 FRMD6-AS1P0C7T7 363 aa12.7□□□□□ -0.38
TMEM39B-203ENST00000441402 MRPL54Q6P161 138 aaKnown RBP12.7□□□□□ -0.38
TMEM39B-203ENST00000441402 FOXI2Q6ZQN5 318 aa12.7□□□□□ -0.38
TMEM39B-203ENST00000441402 TMEM136Q6ZRR5 245 aa12.7□□□□□ -0.38
TMEM39B-203ENST00000441402 C2CD3Q4AC94 2353 aa12.69□□□□□ -0.38
TMEM39B-203ENST00000441402 C5orf52A6NGY3 159 aa12.69□□□□□ -0.38
TMEM39B-203ENST00000441402 DUSP14O95147 198 aaKnown RBP12.69□□□□□ -0.38
TMEM39B-203ENST00000441402 HLA-DQA1P01909 254 aa12.69□□□□□ -0.38
TMEM39B-203ENST00000441402 S100A6P06703 90 aa12.69□□□□□ -0.38
TMEM39B-203ENST00000441402 GZMBP10144 247 aa12.69□□□□□ -0.38
TMEM39B-203ENST00000441402 NSUN5P1Q3KNT7 163 aa12.69□□□□□ -0.38
TMEM39B-203ENST00000441402 CD300EQ496F6 205 aaPredicted RBP12.69□□□□□ -0.38
TMEM39B-203ENST00000441402 EBLN2Q6P2I7 272 aa12.69□□□□□ -0.38
TMEM39B-203ENST00000441402 PGLYRP4Q96LB8 373 aa12.69□□□□□ -0.38
TMEM39B-203ENST00000441402 OR4C46A6NHA9 309 aa12.68□□□□□ -0.38
TMEM39B-203ENST00000441402 SNURFLB1AK76 121 aa12.68□□□□□ -0.38
TMEM39B-203ENST00000441402 TRAV21A0A0B4J279 112 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 CYSRT1A8MQ03 144 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 KLLNB2CW77 178 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 ORM1P02763 201 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 IGLC6P0CF74 106 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 GDF5OSQ5U4N7 250 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 MRPL18Q9H0U6 180 aaKnown RBP12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 ZNF256Q9Y2P7 627 aaPredicted RBP12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 IGKV3D-20A0A0C4DH25 116 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 A0A1B0GUT8 65 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 A0A1B0GW15 77 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 A8MTW9 85 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 GPX1P07203 203 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 HBBP68871 147 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 PRR9Q5T870 116 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 OR2K2Q8NGT1 345 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 C11orf21Q9P2W6 132 aa12.67□□□□□ -0.38
TMEM39B-203ENST00000441402 SETD2Q9BYW2 2564 aaPredicted RBP12.66□□□□□ -0.38
TMEM39B-203ENST00000441402 RIGQ13278 110 aa12.66□□□□□ -0.38
TMEM39B-203ENST00000441402 GATD1Q8NB37 220 aa12.66□□□□□ -0.38
TMEM39B-203ENST00000441402 CTRLP40313 264 aa12.65□□□□□ -0.38
TMEM39B-203ENST00000441402 LEPP41159 167 aa12.65□□□□□ -0.38
TMEM39B-203ENST00000441402 DEFB131AP59861 70 aa12.65□□□□□ -0.38
TMEM39B-203ENST00000441402 SNRPEP62304 92 aaKnown RBP12.65□□□□□ -0.38
TMEM39B-203ENST00000441402 TMSB15BA0A087X1C1 80 aa12.64□□□□□ -0.39
TMEM39B-203ENST00000441402 F2Z2F3 143 aa12.64□□□□□ -0.39
TMEM39B-203ENST00000441402 IGLV1-51P01701 117 aa12.64□□□□□ -0.39
TMEM39B-203ENST00000441402 S100A8P05109 93 aa12.64□□□□□ -0.39
TMEM39B-203ENST00000441402 CD33P20138 364 aa12.64□□□□□ -0.39
TMEM39B-203ENST00000441402 NDUFA6P56556 154 aa12.64□□□□□ -0.39
TMEM39B-203ENST00000441402 COA6Q5JTJ3 125 aaKnown RBP12.64□□□□□ -0.39
TMEM39B-203ENST00000441402 LYZL1Q6UWQ5 148 aa12.64□□□□□ -0.39
TMEM39B-203ENST00000441402 FER1L6-AS1Q8NA97 138 aa12.64□□□□□ -0.39
TMEM39B-203ENST00000441402 CITED1Q99966 193 aa12.64□□□□□ -0.39
TMEM39B-203ENST00000441402 CNFNQ9BYD5 112 aa12.64□□□□□ -0.39
TMEM39B-203ENST00000441402 UBE2CO00762 179 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 ARMS2P0C7Q2 107 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 HLA-DRB4P13762 266 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 HOXA5P20719 270 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 TSPOP30536 169 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 CMC4P56277 68 aaPredicted RBP12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 RAB4BP61018 213 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 AMTNQ6UX39 209 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 LINC00482Q8N8I6 264 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 BORCS7Q96B45 105 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 CLUHP3Q96NS8 147 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 MAP6D1Q9H9H5 199 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 HLA-DRB4X5D2U9 266 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 WNK1Q9H4A3 2382 aa12.63□□□□□ -0.39
TMEM39B-203ENST00000441402 RNASE4P34096 147 aaKnown RBP12.62□□□□□ -0.39
TMEM39B-203ENST00000441402 CAMPP49913 170 aa12.62□□□□□ -0.39
TMEM39B-203ENST00000441402 SSBP4Q9BWG4 385 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms