RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 GPHB5Q86YW7 130 aa3.59□□□□□ -1.84
SCN3A-204ENST00000440431 ZNF48Q96MX3 618 aaPredicted RBP3.59□□□□□ -1.84
SCN3A-204ENST00000440431 PYGO2Q9BRQ0 406 aa3.59□□□□□ -1.84
SCN3A-204ENST00000440431 PTPN13Q12923 2485 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 ATRXP46100 2492 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 NAV3Q8IVL0 2385 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 IGLC7A0M8Q6 106 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 H3BVH4 76 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 GAGE1Q13065 139 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 TMEM170BQ5T4T1 132 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 DUX4L9Q6RFH8 374 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-204ENST00000440431 C16orf54Q6UWD8 224 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 TRPT1Q86TN4 253 aaKnown RBP3.58□□□□□ -1.84
SCN3A-204ENST00000440431 Q8N9W7 124 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 MRAP2Q96G30 205 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 UQCR10Q9UDW1 63 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 ZNF256Q9Y2P7 627 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-204ENST00000440431 KMT2BQ9UMN6 2715 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-204ENST00000440431 DSCAMO60469 2012 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 IGKV2-40A0A087WW87 121 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-204ENST00000440431 IGHV7-81A0A0B4J1V7 117 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 TRAV12-3A0A0B4J271 114 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 A6NDX4 124 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 SLC17A3O00476 420 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 IGKV2D-40P01614 121 aaPredicted RBP3.58□□□□□ -1.84
SCN3A-204ENST00000440431 PLP1P60201 277 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 NDPQ00604 133 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 EXOC3-AS1Q8N2X6 119 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 C5orf56Q8N8D9 126 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 ST6GALNAC6Q969X2 333 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 CSPG4Q6UVK1 2322 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 RBMY1BA6NDE4 496 aaKnown RBP3.58□□□□□ -1.84
SCN3A-204ENST00000440431 RBMY1EA6NEQ0 496 aaKnown RBP3.58□□□□□ -1.84
SCN3A-204ENST00000440431 SH2D1AO60880 128 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 IGKV1-39P01597 117 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 IGKV1D-39P04432 117 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 RBMY1DP0C7P1 496 aaKnown RBP3.58□□□□□ -1.84
SCN3A-204ENST00000440431 RBMY1A1P0DJD3 496 aaKnown RBP3.58□□□□□ -1.84
SCN3A-204ENST00000440431 RBMY1CP0DJD4 496 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 CBLN1P23435 193 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 C8orf86Q6ZUL3 223 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 FAM231DQ6ZW35 169 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 OR5A1Q8NGJ0 315 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 TMEM170AQ8WVE7 144 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 C20orf144Q9BQM9 153 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 SNHG12Q9BXW3 62 aa3.58□□□□□ -1.84
SCN3A-204ENST00000440431 C9JQL5 133 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 CRXO43186 299 aaPredicted RBP3.57□□□□□ -1.84
SCN3A-204ENST00000440431 IGLV2-14P01704 120 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 PFN1P07737 140 aaKnown RBP3.57□□□□□ -1.84
SCN3A-204ENST00000440431 IGHV4-38-2P0DP08 117 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 GZMBP10144 247 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 HOXD3P31249 432 aaPredicted RBP3.57□□□□□ -1.84
SCN3A-204ENST00000440431 KIAA1644Q3SXP7 199 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 GCSAMLQ5JQS6 135 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 SHISA2Q6UWI4 295 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 Q86TA4 180 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 ZNF491Q8N8L2 437 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 CHTOPQ9Y3Y2 248 aaKnown RBP3.57□□□□□ -1.84
SCN3A-204ENST00000440431 IGLV11-55A0A075B6I3 123 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 PLA2G2AP14555 144 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 PPIFP30405 207 aaKnown RBP3.57□□□□□ -1.84
SCN3A-204ENST00000440431 PAX9P55771 341 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 TCTAP57738 103 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 RBX1P62877 108 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 ZNF876PQ49A33 203 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 C11orf71Q6IPW1 123 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 LINC01551Q86U37 167 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 NDUFA11Q86Y39 141 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 HIST3H2BBQ8N257 126 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 RASL10AQ92737 203 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 PLEKHB2Q96CS7 222 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 SLC25A2Q9BXI2 301 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 KLK15Q9H2R5 256 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 NAV2Q8IVL1 2488 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 IGKV3OR2-268A0A0C4DH90 116 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 CGB3P0DN86 165 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 CGB7P0DN87 165 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 FOXA3P55318 350 aaPredicted RBP3.57□□□□□ -1.84
SCN3A-204ENST00000440431 PRR20EP86478 221 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 PRR20CP86479 221 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 PRR20DP86480 221 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 PRR20BP86481 221 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 PRR20AP86496 221 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 LAGE3Q14657 143 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 SS18Q15532 418 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 GFI1BQ5VTD9 330 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 HIST1H4GQ99525 98 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 RNASE7Q9H1E1 156 aaKnown RBP3.57□□□□□ -1.84
SCN3A-204ENST00000440431 PKD1L2Q7Z442 2459 aa3.57□□□□□ -1.84
SCN3A-204ENST00000440431 ARFGEF3Q5TH69 2177 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 CA1P00915 261 aaPredicted RBP3.56□□□□□ -1.84
SCN3A-204ENST00000440431 IGHV4-31P0DP07 118 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 CD28P10747 220 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 EBI3Q14213 229 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 VWC2Q2TAL6 325 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 DMRTA1Q5VZB9 504 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 LYZL1Q6UWQ5 148 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 ZNF664Q8N3J9 261 aa3.56□□□□□ -1.84
SCN3A-204ENST00000440431 Q8N7P7 452 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms