RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 C9orf66Q5T8R8 295 aa10.94□□□□□ -0.66
TNFRSF1A-204ENST00000440083 LINC00322Q6ZN03 302 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-204ENST00000440083 PRR25Q96S07 402 aa10.94□□□□□ -0.66
TNFRSF1A-204ENST00000440083 NEU1Q99519 415 aa10.94□□□□□ -0.66
TNFRSF1A-204ENST00000440083 ASCL2Q99929 193 aa10.94□□□□□ -0.66
TNFRSF1A-204ENST00000440083 SNURFLB1AK76 121 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 PRAC2D3DTV9 90 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 NPIPB6E9PJ23 425 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 SPINK4O60575 86 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HIST1H2BKO60814 126 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 MT-ND6P03923 174 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HIST1H2BJP06899 126 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HIST1H2BOP23527 126 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HIST1H2BBP33778 126 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HIST1H2BDP58876 126 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 SNRPEP62304 92 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HIST1H2BCP62807 126 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 ERCC8Q13216 396 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HIST2H2BEQ16778 126 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 FAM162BQ5T6X4 162 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 MRPL54Q6P161 138 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 OR9G4Q8NGQ1 327 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 OR10J6PQ8NGY7 276 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HIST1H2BHQ93079 126 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HIST1H2BNQ99877 126 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HIST1H2BMQ99879 126 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 GFRA4Q9GZZ7 299 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 PEMTQ9UBM1 199 aa10.93□□□□□ -0.66
TNFRSF1A-204ENST00000440083 PRKDCP78527 4128 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 XKRY2A2RUG3 117 aa10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HIGD1CA8MV81 97 aa10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 SOCS3O14543 225 aa10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 SH2D1AO60880 128 aa10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 CBLN1P23435 193 aa10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 ZNF138P52744 262 aa10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 RAB4BP61018 213 aa10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 RASL11AQ6T310 242 aa10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 ADAMTSL5Q6ZMM2 481 aa10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 GPR61Q9BZJ8 451 aa10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 MRPL18Q9H0U6 180 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 SELENOKQ9Y6D0 94 aa10.92□□□□□ -0.66
TNFRSF1A-204ENST00000440083 TMEM189A5PLL7 270 aa10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 FAM231BA6NCW3 169 aa10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 C2orf70A6NJV1 201 aa10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 WIPF1O43516 503 aa10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 CSN3P07498 182 aa10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 RPS20P60866 119 aaKnown RBP10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 EGFEM1PQ0D2K5 195 aa10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 RBPMS2Q6ZRY4 209 aaKnown RBP10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 COX8CQ7Z4L0 72 aa10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 ATP5L2Q7Z4Y8 100 aa10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 NUP35Q8NFH5 326 aa10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 BORCS7Q96B45 105 aa10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 C20orf173Q96LM9 149 aa10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 GNB1LQ9BYB4 327 aa10.91□□□□□ -0.66
TNFRSF1A-204ENST00000440083 C5orf52A6NGY3 159 aa10.9□□□□□ -0.66
TNFRSF1A-204ENST00000440083 UBE2CO00762 179 aa10.9□□□□□ -0.66
TNFRSF1A-204ENST00000440083 PHOX2AO14813 284 aa10.9□□□□□ -0.66
TNFRSF1A-204ENST00000440083 HLA-DQA1P01909 254 aa10.9□□□□□ -0.66
TNFRSF1A-204ENST00000440083 Q6AWC8 147 aa10.9□□□□□ -0.66
TNFRSF1A-204ENST00000440083 C9orf47Q6ZRZ4 202 aa10.9□□□□□ -0.66
TNFRSF1A-204ENST00000440083 AKR1D1P51857 326 aa10.89□□□□□ -0.67
TNFRSF1A-204ENST00000440083 WFDC3Q8IUB2 231 aa10.89□□□□□ -0.67
TNFRSF1A-204ENST00000440083 PGLYRP4Q96LB8 373 aa10.89□□□□□ -0.67
TNFRSF1A-204ENST00000440083 LINC00477Q96M19 166 aa10.89□□□□□ -0.67
TNFRSF1A-204ENST00000440083 AGPAT4-IT1Q9H0P7 198 aa10.89□□□□□ -0.67
TNFRSF1A-204ENST00000440083 LENEPQ9Y5L5 61 aa10.89□□□□□ -0.67
TNFRSF1A-204ENST00000440083 SORL1Q92673 2214 aa10.88□□□□□ -0.67
TNFRSF1A-204ENST00000440083 FABP5P3A8MUU1 101 aa10.88□□□□□ -0.67
TNFRSF1A-204ENST00000440083 TFPI2P48307 235 aa10.88□□□□□ -0.67
TNFRSF1A-204ENST00000440083 CRIP1P50238 77 aa10.88□□□□□ -0.67
TNFRSF1A-204ENST00000440083 PAFAH1B2P68402 229 aa10.88□□□□□ -0.67
TNFRSF1A-204ENST00000440083 HBBP68871 147 aa10.88□□□□□ -0.67
TNFRSF1A-204ENST00000440083 HIST1H1AQ02539 215 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-204ENST00000440083 TMEM136Q6ZRR5 245 aa10.88□□□□□ -0.67
TNFRSF1A-204ENST00000440083 DYNLRB2Q8TF09 96 aa10.88□□□□□ -0.67
TNFRSF1A-204ENST00000440083 MS4A6AQ9H2W1 248 aa10.88□□□□□ -0.67
TNFRSF1A-204ENST00000440083 S100A8P05109 93 aa10.87□□□□□ -0.67
TNFRSF1A-204ENST00000440083 GZMBP10144 247 aa10.87□□□□□ -0.67
TNFRSF1A-204ENST00000440083 SNRPD3P62318 126 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-204ENST00000440083 RIGQ13278 110 aa10.87□□□□□ -0.67
TNFRSF1A-204ENST00000440083 OR8A1Q8NGG7 326 aa10.87□□□□□ -0.67
TNFRSF1A-204ENST00000440083 GTSF1Q8WW33 167 aa10.87□□□□□ -0.67
TNFRSF1A-204ENST00000440083 PPP1R14DQ9NXH3 145 aa10.87□□□□□ -0.67
TNFRSF1A-204ENST00000440083 TMSB15BA0A087X1C1 80 aa10.86□□□□□ -0.67
TNFRSF1A-204ENST00000440083 K7EIL1 84 aa10.86□□□□□ -0.67
TNFRSF1A-204ENST00000440083 IGLV1-51P01701 117 aa10.86□□□□□ -0.67
TNFRSF1A-204ENST00000440083 APCSP02743 223 aa10.86□□□□□ -0.67
TNFRSF1A-204ENST00000440083 HOXA5P20719 270 aa10.86□□□□□ -0.67
TNFRSF1A-204ENST00000440083 INSL3P51460 131 aa10.86□□□□□ -0.67
TNFRSF1A-204ENST00000440083 DCANP1Q8TF63 244 aa10.86□□□□□ -0.67
TNFRSF1A-204ENST00000440083 TPPP3Q9BW30 176 aa10.86□□□□□ -0.67
TNFRSF1A-204ENST00000440083 A0A1B0GXF2 115 aa10.85□□□□□ -0.67
TNFRSF1A-204ENST00000440083 K7EQG2 157 aa10.85□□□□□ -0.67
TNFRSF1A-204ENST00000440083 ORM1P02763 201 aa10.85□□□□□ -0.67
TNFRSF1A-204ENST00000440083 ZNF688P0C7X2 276 aa10.85□□□□□ -0.67
TNFRSF1A-204ENST00000440083 ZNF705DP0CH99 300 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-204ENST00000440083 ZNF705BP0CI00 300 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-204ENST00000440083 S100A2P29034 98 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms