RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 LMO4P61968 165 aa10.41□□□□□ -0.74
HERPUD1-204ENST00000439977 C8orf86Q6ZUL3 223 aa10.41□□□□□ -0.74
HERPUD1-204ENST00000439977 COX8CQ7Z4L0 72 aa10.41□□□□□ -0.74
HERPUD1-204ENST00000439977 CBY1Q9Y3M2 126 aa10.41□□□□□ -0.74
HERPUD1-204ENST00000439977 TRBV12-3P01733 135 aa10.4□□□□□ -0.74
HERPUD1-204ENST00000439977 LGALS9BQ3B8N2 356 aa10.4□□□□□ -0.74
HERPUD1-204ENST00000439977 LGALS9CQ6DKI2 356 aa10.4□□□□□ -0.74
HERPUD1-204ENST00000439977 NPFFO15130 113 aa10.4□□□□□ -0.74
HERPUD1-204ENST00000439977 PCP4P48539 62 aa10.4□□□□□ -0.74
HERPUD1-204ENST00000439977 TMEM78Q5T7P6 136 aa10.4□□□□□ -0.74
HERPUD1-204ENST00000439977 CUBNO60494 3623 aa10.4□□□□□ -0.75
HERPUD1-204ENST00000439977 FBLL1A6NHQ2 334 aaKnown RBP10.4□□□□□ -0.75
HERPUD1-204ENST00000439977 K7EP13 123 aa10.4□□□□□ -0.75
HERPUD1-204ENST00000439977 LCNL1Q6ZST4 164 aa10.4□□□□□ -0.75
HERPUD1-204ENST00000439977 METTL26Q96S19 204 aa10.4□□□□□ -0.75
HERPUD1-204ENST00000439977 UTP20O75691 2785 aaKnown RBP10.39□□□□□ -0.75
HERPUD1-204ENST00000439977 CD5LO43866 347 aa10.39□□□□□ -0.75
HERPUD1-204ENST00000439977 EFNA4P52798 201 aa10.39□□□□□ -0.75
HERPUD1-204ENST00000439977 LY6EQ16553 131 aa10.39□□□□□ -0.75
HERPUD1-204ENST00000439977 TMEM158Q8WZ71 300 aa10.39□□□□□ -0.75
HERPUD1-204ENST00000439977 EEF1AKMT3Q96AZ1 226 aa10.39□□□□□ -0.75
HERPUD1-204ENST00000439977 C16orf92Q96LL3 132 aa10.39□□□□□ -0.75
HERPUD1-204ENST00000439977 PSMG3-AS1Q96PY0 264 aa10.39□□□□□ -0.75
HERPUD1-204ENST00000439977 IGKV2D-26A0A0A0MRZ7 120 aa10.39□□□□□ -0.75
HERPUD1-204ENST00000439977 IGHV3-11P01762 117 aa10.39□□□□□ -0.75
HERPUD1-204ENST00000439977 RBX1P62877 108 aa10.39□□□□□ -0.75
HERPUD1-204ENST00000439977 RPL11P62913 178 aaKnown RBP10.38□□□□□ -0.75
HERPUD1-204ENST00000439977 UNQ9165/PRO28630Q6UXU0 137 aa10.38□□□□□ -0.75
HERPUD1-204ENST00000439977 K7EMI3 77 aa10.38□□□□□ -0.75
HERPUD1-204ENST00000439977 SMAD7O15105 426 aaKnown RBP10.38□□□□□ -0.75
HERPUD1-204ENST00000439977 ATP5G2Q06055 141 aa10.38□□□□□ -0.75
HERPUD1-204ENST00000439977 LINC01559Q495D7 138 aa10.38□□□□□ -0.75
HERPUD1-204ENST00000439977 PRR9Q5T870 116 aa10.38□□□□□ -0.75
HERPUD1-204ENST00000439977 C5orf56Q8N8D9 126 aa10.38□□□□□ -0.75
HERPUD1-204ENST00000439977 GLMPQ8WWB7 406 aa10.38□□□□□ -0.75
HERPUD1-204ENST00000439977 TMEM190Q8WZ59 177 aa10.38□□□□□ -0.75
HERPUD1-204ENST00000439977 A1L4Q6 167 aa10.37□□□□□ -0.75
HERPUD1-204ENST00000439977 H3BVH4 76 aa10.37□□□□□ -0.75
HERPUD1-204ENST00000439977 UCNP55089 124 aa10.37□□□□□ -0.75
HERPUD1-204ENST00000439977 BOD1L2Q8IYS8 172 aa10.37□□□□□ -0.75
HERPUD1-204ENST00000439977 DEFB104AQ8WTQ1 72 aa10.37□□□□□ -0.75
HERPUD1-204ENST00000439977 SPANXN1Q5VSR9 72 aa10.37□□□□□ -0.75
HERPUD1-204ENST00000439977 GTSCR1Q86UQ5 136 aa10.37□□□□□ -0.75
HERPUD1-204ENST00000439977 C20orf173Q96LM9 149 aa10.37□□□□□ -0.75
HERPUD1-204ENST00000439977 FOXC2Q99958 501 aa10.37□□□□□ -0.75
HERPUD1-204ENST00000439977 CSPG4Q6UVK1 2322 aa10.37□□□□□ -0.75
HERPUD1-204ENST00000439977 SLC50A1Q9BRV3 221 aa10.37□□□□□ -0.75
HERPUD1-204ENST00000439977 PPP1R14DQ9NXH3 145 aa10.37□□□□□ -0.75
HERPUD1-204ENST00000439977 TRAV40A0A0B4J280 105 aa10.36□□□□□ -0.75
HERPUD1-204ENST00000439977 H3BUT2 72 aa10.36□□□□□ -0.75
HERPUD1-204ENST00000439977 KIR3DS1Q14943 382 aa10.36□□□□□ -0.75
HERPUD1-204ENST00000439977 CNFNQ9BYD5 112 aa10.36□□□□□ -0.75
HERPUD1-204ENST00000439977 KLK15Q9H2R5 256 aa10.36□□□□□ -0.75
HERPUD1-204ENST00000439977 FLNCQ14315 2725 aa10.36□□□□□ -0.75
HERPUD1-204ENST00000439977 TRAV41A0A0B4J266 112 aa10.36□□□□□ -0.75
HERPUD1-204ENST00000439977 IGHV7-4-1A0A0J9YVY3 117 aa10.36□□□□□ -0.75
HERPUD1-204ENST00000439977 F6UB75 175 aa10.36□□□□□ -0.75
HERPUD1-204ENST00000439977 OR2K2Q8NGT1 345 aa10.36□□□□□ -0.75
HERPUD1-204ENST00000439977 TMEM160Q9NX00 188 aa10.36□□□□□ -0.75
HERPUD1-204ENST00000439977 M0R381 172 aa10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 SRD5A1P18405 259 aa10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 FCER1GP30273 86 aa10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 ARL6IP6Q8N6S5 226 aa10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 COL25A1Q9BXS0 654 aaPredicted RBP10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 PEF1Q9UBV8 284 aaKnown RBP10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 CFAP46Q8IYW2 2715 aa10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 GAGE12BA1L429 117 aa10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 PPBPP02775 128 aa10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 S100A7P31151 101 aa10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 RAB9AP51151 201 aa10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 ODF1Q14990 250 aa10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 WFDC12Q8WWY7 111 aa10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 CST9LQ9H4G1 147 aa10.35□□□□□ -0.75
HERPUD1-204ENST00000439977 TRBV7-1A0A0A6YYK4 115 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 ARL3P36405 182 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 JMJD8Q96S16 334 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 ABCA2Q9BZC7 2435 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 CENPEQ02224 2701 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 IGHV4-39P01824 125 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 SMIM17P0DL12 118 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 Q6ZS46 218 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 OR1N2Q8NGR9 330 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 AP1S3Q96PC3 154 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 NXT2Q9NPJ8 142 aaKnown RBP10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 HHLA3Q9XRX5 114 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 TMEM8BA6NDV4 472 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 GAGE10A6NGK3 116 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 GNLYP22749 145 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 ADAMTSL5Q6ZMM2 481 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 PIFOQ8TCI5 191 aa10.34□□□□□ -0.75
HERPUD1-204ENST00000439977 RBAKDNA6NC62 111 aa10.33□□□□□ -0.76
HERPUD1-204ENST00000439977 IGHV4-38-2P0DP08 117 aa10.33□□□□□ -0.76
HERPUD1-204ENST00000439977 GCSHP23434 173 aa10.33□□□□□ -0.76
HERPUD1-204ENST00000439977 ZC2HC1BQ5TFG8 222 aa10.33□□□□□ -0.76
HERPUD1-204ENST00000439977 SMIM15Q7Z3B0 74 aa10.33□□□□□ -0.76
HERPUD1-204ENST00000439977 HIF1ANQ9NWT6 349 aa10.33□□□□□ -0.76
HERPUD1-204ENST00000439977 BLCAPP62952 87 aa10.33□□□□□ -0.76
HERPUD1-204ENST00000439977 SEC11AP67812 179 aa10.33□□□□□ -0.76
HERPUD1-204ENST00000439977 ITLN2Q8WWU7 325 aaPredicted RBP10.33□□□□□ -0.76
HERPUD1-204ENST00000439977 IGHV4-61A0A0C4DH41 118 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms