RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 ZNF266Q14584 549 aa11.26□□□□□ -0.61
SNRPD3-204ENST00000439775 ESRGQ1W209 222 aa11.26□□□□□ -0.61
SNRPD3-204ENST00000439775 ZNF575Q86XF7 245 aa11.26□□□□□ -0.61
SNRPD3-204ENST00000439775 VSIG2Q96IQ7 327 aa11.26□□□□□ -0.61
SNRPD3-204ENST00000439775 ST6GAL2Q96JF0 529 aa11.26□□□□□ -0.61
SNRPD3-204ENST00000439775 ARPC5LQ9BPX5 153 aa11.26□□□□□ -0.61
SNRPD3-204ENST00000439775 SMIM3Q9BZL3 60 aa11.26□□□□□ -0.61
SNRPD3-204ENST00000439775 TP53TG3Q9ULZ0 132 aa11.26□□□□□ -0.61
SNRPD3-204ENST00000439775 LENEPQ9Y5L5 61 aa11.26□□□□□ -0.61
SNRPD3-204ENST00000439775 A0A096LPF7 62 aa11.25□□□□□ -0.61
SNRPD3-204ENST00000439775 A0A1W2PPQ1 181 aa11.25□□□□□ -0.61
SNRPD3-204ENST00000439775 Q6ZQT7 251 aa11.25□□□□□ -0.61
SNRPD3-204ENST00000439775 PCLOQ9Y6V0 5065 aa11.25□□□□□ -0.61
SNRPD3-204ENST00000439775 DIRC3C9JPN6 131 aa11.24□□□□□ -0.61
SNRPD3-204ENST00000439775 ZNF415Q09FC8 603 aa11.24□□□□□ -0.61
SNRPD3-204ENST00000439775 Q6AWC8 147 aa11.24□□□□□ -0.61
SNRPD3-204ENST00000439775 TMED6Q8WW62 240 aa11.24□□□□□ -0.61
SNRPD3-204ENST00000439775 KRTAP1-5Q9BYS1 174 aa11.24□□□□□ -0.61
SNRPD3-204ENST00000439775 BTF3P20290 206 aaKnown RBP11.23□□□□□ -0.61
SNRPD3-204ENST00000439775 PQLC2Q6ZP29 291 aa11.23□□□□□ -0.61
SNRPD3-204ENST00000439775 WFDC1Q9HC57 220 aa11.23□□□□□ -0.61
SNRPD3-204ENST00000439775 OTORQ9NRC9 128 aa11.23□□□□□ -0.61
SNRPD3-204ENST00000439775 MRPL16Q9NX20 251 aaKnown RBP11.23□□□□□ -0.61
SNRPD3-204ENST00000439775 ACOT6Q3I5F7 207 aaPredicted RBP11.22□□□□□ -0.61
SNRPD3-204ENST00000439775 ARL6IP6Q8N6S5 226 aa11.22□□□□□ -0.61
SNRPD3-204ENST00000439775 BATF3Q9NR55 127 aa11.22□□□□□ -0.61
SNRPD3-204ENST00000439775 PRO0255Q9UI72 69 aa11.22□□□□□ -0.61
SNRPD3-204ENST00000439775 ICOSQ9Y6W8 199 aa11.22□□□□□ -0.61
SNRPD3-204ENST00000439775 A0A1W2PPV4 95 aa11.21□□□□□ -0.61
SNRPD3-204ENST00000439775 PAX4O43316 350 aa11.21□□□□□ -0.61
SNRPD3-204ENST00000439775 SLAQ13239 276 aa11.21□□□□□ -0.61
SNRPD3-204ENST00000439775 FAM74A1Q5RGS3 127 aa11.21□□□□□ -0.61
SNRPD3-204ENST00000439775 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
SNRPD3-204ENST00000439775 IGHV3-53P01767 116 aa11.2□□□□□ -0.62
SNRPD3-204ENST00000439775 RAB2AP61019 212 aa11.2□□□□□ -0.62
SNRPD3-204ENST00000439775 MUC21Q5SSG8 566 aa11.2□□□□□ -0.62
SNRPD3-204ENST00000439775 CMTM2Q8TAZ6 248 aa11.2□□□□□ -0.62
SNRPD3-204ENST00000439775 HYLS1Q96M11 299 aa11.2□□□□□ -0.62
SNRPD3-204ENST00000439775 ALG5Q9Y673 324 aa11.2□□□□□ -0.62
SNRPD3-204ENST00000439775 MUC4Q99102 2169 aa11.2□□□□□ -0.62
SNRPD3-204ENST00000439775 TRGV11A0A075B6L2 103 aa11.19□□□□□ -0.62
SNRPD3-204ENST00000439775 PGPA6NDG6 321 aa11.19□□□□□ -0.62
SNRPD3-204ENST00000439775 EIF3GO75821 320 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNRPD3-204ENST00000439775 CRYBA4P53673 196 aa11.19□□□□□ -0.62
SNRPD3-204ENST00000439775 TDRG1Q3Y452 100 aa11.19□□□□□ -0.62
SNRPD3-204ENST00000439775 FAM159AQ6UWV7 190 aa11.19□□□□□ -0.62
SNRPD3-204ENST00000439775 OR2G3Q8NGZ4 309 aa11.19□□□□□ -0.62
SNRPD3-204ENST00000439775 SPXQ9BT56 116 aa11.19□□□□□ -0.62
SNRPD3-204ENST00000439775 MDFICQ9P1T7 246 aa11.19□□□□□ -0.62
SNRPD3-204ENST00000439775 PTTG1O95997 202 aa11.18□□□□□ -0.62
SNRPD3-204ENST00000439775 FHL2Q14192 279 aa11.18□□□□□ -0.62
SNRPD3-204ENST00000439775 TMEM183BQ1AE95 376 aa11.18□□□□□ -0.62
SNRPD3-204ENST00000439775 TMEM183AQ8IXX5 376 aa11.18□□□□□ -0.62
SNRPD3-204ENST00000439775 OR10G4Q8NGN3 311 aa11.18□□□□□ -0.62
SNRPD3-204ENST00000439775 OR10G9Q8NGN4 311 aa11.18□□□□□ -0.62
SNRPD3-204ENST00000439775 OR10G7Q8NGN6 311 aa11.18□□□□□ -0.62
SNRPD3-204ENST00000439775 RASL10AQ92737 203 aa11.18□□□□□ -0.62
SNRPD3-204ENST00000439775 HHLA3Q9XRX5 114 aa11.18□□□□□ -0.62
SNRPD3-204ENST00000439775 SIVA1O15304 175 aa11.17□□□□□ -0.62
SNRPD3-204ENST00000439775 GOLT1AQ6ZVE7 132 aa11.17□□□□□ -0.62
SNRPD3-204ENST00000439775 IQCF2Q8IXL9 164 aa11.17□□□□□ -0.62
SNRPD3-204ENST00000439775 C8orf49Q96NF6 230 aa11.17□□□□□ -0.62
SNRPD3-204ENST00000439775 AQP10Q96PS8 301 aa11.17□□□□□ -0.62
SNRPD3-204ENST00000439775 PSMG3Q9BT73 122 aaPredicted RBP11.17□□□□□ -0.62
SNRPD3-204ENST00000439775 RPH3ALQ9UNE2 315 aa11.17□□□□□ -0.62
SNRPD3-204ENST00000439775 CDK2AP2O75956 126 aa11.16□□□□□ -0.62
SNRPD3-204ENST00000439775 NXPH4O95158 308 aa11.16□□□□□ -0.62
SNRPD3-204ENST00000439775 ARL14EPLP0DKL9 152 aa11.16□□□□□ -0.62
SNRPD3-204ENST00000439775 CDC34P49427 236 aaPredicted RBP11.16□□□□□ -0.62
SNRPD3-204ENST00000439775 MRPL23Q16540 153 aaKnown RBP11.16□□□□□ -0.62
SNRPD3-204ENST00000439775 RYR1P21817 5038 aa11.16□□□□□ -0.62
SNRPD3-204ENST00000439775 TRAV21A0A0B4J279 112 aa11.15□□□□□ -0.62
SNRPD3-204ENST00000439775 TRGV4A0A0C4DH28 118 aa11.15□□□□□ -0.62
SNRPD3-204ENST00000439775 SERTM2A0A1B0GWG4 89 aa11.15□□□□□ -0.62
SNRPD3-204ENST00000439775 STAG3L2P0CL84 134 aa11.15□□□□□ -0.62
SNRPD3-204ENST00000439775 STAG3L3P0CL85 134 aa11.15□□□□□ -0.62
SNRPD3-204ENST00000439775 LINC00315P59091 139 aa11.15□□□□□ -0.62
SNRPD3-204ENST00000439775 TVP23CQ96ET8 276 aa11.15□□□□□ -0.62
SNRPD3-204ENST00000439775 ZNF479Q96JC4 524 aa11.15□□□□□ -0.62
SNRPD3-204ENST00000439775 NAGKQ9UJ70 344 aa11.15□□□□□ -0.62
SNRPD3-204ENST00000439775 TRAV8-1A0A0A6YYK1 113 aa11.14□□□□□ -0.63
SNRPD3-204ENST00000439775 HMGB3O15347 200 aaKnown RBP11.14□□□□□ -0.63
SNRPD3-204ENST00000439775 SFTA3P0C7M3 94 aa11.14□□□□□ -0.63
SNRPD3-204ENST00000439775 SERF2P84101 59 aa11.14□□□□□ -0.63
SNRPD3-204ENST00000439775 NEGR1Q7Z3B1 354 aa11.14□□□□□ -0.63
SNRPD3-204ENST00000439775 SPATA12Q7Z6I5 190 aa11.14□□□□□ -0.63
SNRPD3-204ENST00000439775 HSD17B11Q8NBQ5 300 aa11.14□□□□□ -0.63
SNRPD3-204ENST00000439775 SUN5Q8TC36 379 aa11.14□□□□□ -0.63
SNRPD3-204ENST00000439775 ASB13Q8WXK3 278 aa11.14□□□□□ -0.63
SNRPD3-204ENST00000439775 MED28Q9H204 178 aa11.14□□□□□ -0.63
SNRPD3-204ENST00000439775 TREM1Q9NP99 234 aa11.14□□□□□ -0.63
SNRPD3-204ENST00000439775 LRP1BQ9NZR2 4599 aa11.13□□□□□ -0.63
SNRPD3-204ENST00000439775 TRAV4A0A0B4J268 109 aa11.13□□□□□ -0.63
SNRPD3-204ENST00000439775 IGHV3-16A0A0C4DH30 117 aa11.13□□□□□ -0.63
SNRPD3-204ENST00000439775 F6UZH7 168 aa11.13□□□□□ -0.63
SNRPD3-204ENST00000439775 K7EQD1 137 aa11.13□□□□□ -0.63
SNRPD3-204ENST00000439775 M0R2P5 195 aa11.13□□□□□ -0.63
SNRPD3-204ENST00000439775 MBP02144 154 aa11.13□□□□□ -0.63
SNRPD3-204ENST00000439775 ORM1P02763 201 aa11.13□□□□□ -0.63
SNRPD3-204ENST00000439775 ATP6V0CP27449 155 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms