RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 IGHV1OR15-1A0A075B7D0 117 aa14.05□□□□□ -0.16
NCKIPSD-206ENST00000439518 CSN1S1P47710 185 aa14.05□□□□□ -0.16
NCKIPSD-206ENST00000439518 UPK3BQ9BT76 320 aa14.05□□□□□ -0.16
NCKIPSD-206ENST00000439518 WFDC1Q9HC57 220 aa14.05□□□□□ -0.16
NCKIPSD-206ENST00000439518 ZNF266Q14584 549 aa14.04□□□□□ -0.16
NCKIPSD-206ENST00000439518 KHDC3LQ587J8 217 aa14.04□□□□□ -0.16
NCKIPSD-206ENST00000439518 ZNF575Q86XF7 245 aa14.04□□□□□ -0.16
NCKIPSD-206ENST00000439518 MRPS16Q9Y3D3 137 aaKnown RBP14.04□□□□□ -0.16
NCKIPSD-206ENST00000439518 A0A096LPF7 62 aa14.03□□□□□ -0.16
NCKIPSD-206ENST00000439518 TAS2R45P59539 299 aa14.03□□□□□ -0.16
NCKIPSD-206ENST00000439518 KRTAP1-5Q9BYS1 174 aa14.03□□□□□ -0.16
NCKIPSD-206ENST00000439518 DIRC3C9JPN6 131 aa14.02□□□□□ -0.17
NCKIPSD-206ENST00000439518 ST6GAL2Q96JF0 529 aa14.02□□□□□ -0.17
NCKIPSD-206ENST00000439518 LENEPQ9Y5L5 61 aa14.02□□□□□ -0.17
NCKIPSD-206ENST00000439518 EIF3GO75821 320 aaKnown RBP eCLIP14.01□□□□□ -0.17
NCKIPSD-206ENST00000439518 TTC32Q5I0X7 151 aa14.01□□□□□ -0.17
NCKIPSD-206ENST00000439518 ARPC5LQ9BPX5 153 aa14.01□□□□□ -0.17
NCKIPSD-206ENST00000439518 MRPL16Q9NX20 251 aaKnown RBP14.01□□□□□ -0.17
NCKIPSD-206ENST00000439518 TMED6Q8WW62 240 aa14□□□□□ -0.17
NCKIPSD-206ENST00000439518 BATF3Q9NR55 127 aa14□□□□□ -0.17
NCKIPSD-206ENST00000439518 OTORQ9NRC9 128 aa14□□□□□ -0.17
NCKIPSD-206ENST00000439518 A0A1W2PPQ1 181 aa13.99□□□□□ -0.17
NCKIPSD-206ENST00000439518 ZNF415Q09FC8 603 aa13.99□□□□□ -0.17
NCKIPSD-206ENST00000439518 ACOT6Q3I5F7 207 aaPredicted RBP13.99□□□□□ -0.17
NCKIPSD-206ENST00000439518 MUC21Q5SSG8 566 aa13.99□□□□□ -0.17
NCKIPSD-206ENST00000439518 Q6AWC8 147 aa13.99□□□□□ -0.17
NCKIPSD-206ENST00000439518 ALG5Q9Y673 324 aa13.99□□□□□ -0.17
NCKIPSD-206ENST00000439518 PGPA6NDG6 321 aa13.98□□□□□ -0.17
NCKIPSD-206ENST00000439518 RAB2AP61019 212 aa13.98□□□□□ -0.17
NCKIPSD-206ENST00000439518 PQLC2Q6ZP29 291 aa13.98□□□□□ -0.17
NCKIPSD-206ENST00000439518 HYLS1Q96M11 299 aa13.98□□□□□ -0.17
NCKIPSD-206ENST00000439518 MDFICQ9P1T7 246 aa13.98□□□□□ -0.17
NCKIPSD-206ENST00000439518 A0A1W2PPV4 95 aa13.97□□□□□ -0.17
NCKIPSD-206ENST00000439518 PAX4O43316 350 aa13.97□□□□□ -0.17
NCKIPSD-206ENST00000439518 IGHV3-53P01767 116 aa13.97□□□□□ -0.17
NCKIPSD-206ENST00000439518 ARL6IP6Q8N6S5 226 aa13.97□□□□□ -0.17
NCKIPSD-206ENST00000439518 PRO0255Q9UI72 69 aa13.97□□□□□ -0.17
NCKIPSD-206ENST00000439518 SLAQ13239 276 aa13.96□□□□□ -0.17
NCKIPSD-206ENST00000439518 FHL2Q14192 279 aa13.96□□□□□ -0.17
NCKIPSD-206ENST00000439518 ICOSQ9Y6W8 199 aa13.96□□□□□ -0.17
NCKIPSD-206ENST00000439518 BTF3P20290 206 aaKnown RBP13.95□□□□□ -0.18
NCKIPSD-206ENST00000439518 CRYBA4P53673 196 aa13.95□□□□□ -0.18
NCKIPSD-206ENST00000439518 TMEM183BQ1AE95 376 aa13.95□□□□□ -0.18
NCKIPSD-206ENST00000439518 TDRG1Q3Y452 100 aa13.95□□□□□ -0.18
NCKIPSD-206ENST00000439518 FAM74A1Q5RGS3 127 aa13.95□□□□□ -0.18
NCKIPSD-206ENST00000439518 TMEM183AQ8IXX5 376 aa13.95□□□□□ -0.18
NCKIPSD-206ENST00000439518 OR10G4Q8NGN3 311 aa13.95□□□□□ -0.18
NCKIPSD-206ENST00000439518 OR10G9Q8NGN4 311 aa13.95□□□□□ -0.18
NCKIPSD-206ENST00000439518 OR10G7Q8NGN6 311 aa13.95□□□□□ -0.18
NCKIPSD-206ENST00000439518 CMTM2Q8TAZ6 248 aa13.95□□□□□ -0.18
NCKIPSD-206ENST00000439518 HHLA3Q9XRX5 114 aa13.95□□□□□ -0.18
NCKIPSD-206ENST00000439518 C16orf90A8MZG2 172 aa13.94□□□□□ -0.18
NCKIPSD-206ENST00000439518 FAM159AQ6UWV7 190 aa13.94□□□□□ -0.18
NCKIPSD-206ENST00000439518 GOLT1AQ6ZVE7 132 aa13.94□□□□□ -0.18
NCKIPSD-206ENST00000439518 OR2G3Q8NGZ4 309 aa13.94□□□□□ -0.18
NCKIPSD-206ENST00000439518 RASL10AQ92737 203 aa13.94□□□□□ -0.18
NCKIPSD-206ENST00000439518 C8orf49Q96NF6 230 aa13.94□□□□□ -0.18
NCKIPSD-206ENST00000439518 SPXQ9BT56 116 aa13.94□□□□□ -0.18
NCKIPSD-206ENST00000439518 TRGV11A0A075B6L2 103 aa13.93□□□□□ -0.18
NCKIPSD-206ENST00000439518 HMGB3O15347 200 aaKnown RBP13.93□□□□□ -0.18
NCKIPSD-206ENST00000439518 PTTG1O95997 202 aa13.93□□□□□ -0.18
NCKIPSD-206ENST00000439518 IQCF2Q8IXL9 164 aa13.93□□□□□ -0.18
NCKIPSD-206ENST00000439518 TVP23CQ96ET8 276 aa13.93□□□□□ -0.18
NCKIPSD-206ENST00000439518 RPH3ALQ9UNE2 315 aa13.93□□□□□ -0.18
NCKIPSD-206ENST00000439518 RYR1P21817 5038 aa13.93□□□□□ -0.18
NCKIPSD-206ENST00000439518 AQP10Q96PS8 301 aa13.92□□□□□ -0.18
NCKIPSD-206ENST00000439518 TRAV8-1A0A0A6YYK1 113 aa13.91□□□□□ -0.18
NCKIPSD-206ENST00000439518 SIVA1O15304 175 aa13.91□□□□□ -0.18
NCKIPSD-206ENST00000439518 ARL14EPLP0DKL9 152 aa13.91□□□□□ -0.18
NCKIPSD-206ENST00000439518 MRPL23Q16540 153 aaKnown RBP13.91□□□□□ -0.18
NCKIPSD-206ENST00000439518 HSD17B11Q8NBQ5 300 aa13.91□□□□□ -0.18
NCKIPSD-206ENST00000439518 SUN5Q8TC36 379 aa13.91□□□□□ -0.18
NCKIPSD-206ENST00000439518 ZNF479Q96JC4 524 aa13.91□□□□□ -0.18
NCKIPSD-206ENST00000439518 PSMG3Q9BT73 122 aaPredicted RBP13.91□□□□□ -0.18
NCKIPSD-206ENST00000439518 MED28Q9H204 178 aa13.91□□□□□ -0.18
NCKIPSD-206ENST00000439518 TRGV4A0A0C4DH28 118 aa13.9□□□□□ -0.18
NCKIPSD-206ENST00000439518 NXPH4O95158 308 aa13.9□□□□□ -0.18
NCKIPSD-206ENST00000439518 SFTA3P0C7M3 94 aa13.9□□□□□ -0.18
NCKIPSD-206ENST00000439518 STAG3L2P0CL84 134 aa13.9□□□□□ -0.18
NCKIPSD-206ENST00000439518 STAG3L3P0CL85 134 aa13.9□□□□□ -0.18
NCKIPSD-206ENST00000439518 CDC34P49427 236 aaPredicted RBP13.9□□□□□ -0.18
NCKIPSD-206ENST00000439518 GNG5P63218 68 aa13.9□□□□□ -0.18
NCKIPSD-206ENST00000439518 LYPD5Q6UWN5 251 aa13.9□□□□□ -0.18
NCKIPSD-206ENST00000439518 RAB24Q969Q5 203 aa13.9□□□□□ -0.18
NCKIPSD-206ENST00000439518 TREM1Q9NP99 234 aa13.9□□□□□ -0.18
NCKIPSD-206ENST00000439518 NAGKQ9UJ70 344 aa13.9□□□□□ -0.18
NCKIPSD-206ENST00000439518 TRAV21A0A0B4J279 112 aa13.89□□□□□ -0.19
NCKIPSD-206ENST00000439518 IGHV3-16A0A0C4DH30 117 aa13.89□□□□□ -0.19
NCKIPSD-206ENST00000439518 GNRH2O43555 120 aa13.89□□□□□ -0.19
NCKIPSD-206ENST00000439518 ATP6V0CP27449 155 aa13.89□□□□□ -0.19
NCKIPSD-206ENST00000439518 LINC00315P59091 139 aa13.89□□□□□ -0.19
NCKIPSD-206ENST00000439518 Q5BKY6 102 aa13.89□□□□□ -0.19
NCKIPSD-206ENST00000439518 F6UZH7 168 aa13.88□□□□□ -0.19
NCKIPSD-206ENST00000439518 CDK2AP2O75956 126 aa13.88□□□□□ -0.19
NCKIPSD-206ENST00000439518 SERF2P84101 59 aa13.88□□□□□ -0.19
NCKIPSD-206ENST00000439518 NEGR1Q7Z3B1 354 aa13.88□□□□□ -0.19
NCKIPSD-206ENST00000439518 SPATA12Q7Z6I5 190 aa13.88□□□□□ -0.19
NCKIPSD-206ENST00000439518 SERTM2A0A1B0GWG4 89 aa13.87□□□□□ -0.19
NCKIPSD-206ENST00000439518 M0R2P5 195 aa13.87□□□□□ -0.19
NCKIPSD-206ENST00000439518 GCHFRP30047 84 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms