RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 FAM57AQ8TBR7 257 aa12.48□□□□□ -0.41
DHFR-201ENST00000439211 TMEM158Q8WZ71 300 aa12.48□□□□□ -0.41
DHFR-201ENST00000439211 ANKRD11Q6UB99 2663 aaPredicted RBP12.48□□□□□ -0.41
DHFR-201ENST00000439211 C15orf53Q8NAA6 179 aa12.48□□□□□ -0.41
DHFR-201ENST00000439211 TRAV4A0A0B4J268 109 aa12.47□□□□□ -0.41
DHFR-201ENST00000439211 TMEM178BH3BS89 294 aa12.47□□□□□ -0.41
DHFR-201ENST00000439211 TAL2Q16559 108 aa12.47□□□□□ -0.41
DHFR-201ENST00000439211 CFAP126Q5VTH2 177 aa12.47□□□□□ -0.41
DHFR-201ENST00000439211 FAM104BQ5XKR9 115 aa12.47□□□□□ -0.41
DHFR-201ENST00000439211 ZNF833PQ6ZTB9 187 aa12.47□□□□□ -0.41
DHFR-201ENST00000439211 HLA-DRB4P13762 266 aa12.47□□□□□ -0.41
DHFR-201ENST00000439211 MRPL51Q4U2R6 128 aaKnown RBP12.47□□□□□ -0.41
DHFR-201ENST00000439211 PATE2Q6UY27 113 aa12.47□□□□□ -0.41
DHFR-201ENST00000439211 ASCL5Q7RTU5 278 aa12.47□□□□□ -0.41
DHFR-201ENST00000439211 Q86TA4 180 aa12.47□□□□□ -0.41
DHFR-201ENST00000439211 RITA1Q96K30 269 aa12.47□□□□□ -0.41
DHFR-201ENST00000439211 HLA-DRB4X5D2U9 266 aa12.47□□□□□ -0.41
DHFR-201ENST00000439211 ZNF815PA8K554 130 aa12.46□□□□□ -0.41
DHFR-201ENST00000439211 PHLDA1Q8WV24 401 aaPredicted RBP12.46□□□□□ -0.41
DHFR-201ENST00000439211 SPXQ9BT56 116 aa12.46□□□□□ -0.41
DHFR-201ENST00000439211 IGHV3-35A0A0C4DH35 117 aa12.46□□□□□ -0.41
DHFR-201ENST00000439211 C5orf47Q569G3 176 aa12.46□□□□□ -0.41
DHFR-201ENST00000439211 RNASE6Q93091 150 aaKnown RBP12.46□□□□□ -0.41
DHFR-201ENST00000439211 PRSS22Q9GZN4 317 aa12.46□□□□□ -0.41
DHFR-201ENST00000439211 VPREB3Q9UKI3 123 aa12.46□□□□□ -0.41
DHFR-201ENST00000439211 A0A0G2JNJ9 132 aa12.46□□□□□ -0.42
DHFR-201ENST00000439211 MYMXA0A1B0GTQ4 84 aa12.46□□□□□ -0.42
DHFR-201ENST00000439211 Q9UFV3 132 aa12.46□□□□□ -0.42
DHFR-201ENST00000439211 BRI3O95415 125 aa12.45□□□□□ -0.42
DHFR-201ENST00000439211 IGFL2Q6UWQ7 119 aa12.45□□□□□ -0.42
DHFR-201ENST00000439211 RHODO00212 210 aa12.45□□□□□ -0.42
DHFR-201ENST00000439211 C9orf153Q5TBE3 101 aa12.45□□□□□ -0.42
DHFR-201ENST00000439211 TMEM133Q9H2Q1 129 aa12.45□□□□□ -0.42
DHFR-201ENST00000439211 MUC6Q6W4X9 2439 aa12.45□□□□□ -0.42
DHFR-201ENST00000439211 TRAV2A0A0B4J234 112 aa12.45□□□□□ -0.42
DHFR-201ENST00000439211 CD3EP07766 207 aa12.45□□□□□ -0.42
DHFR-201ENST00000439211 IGHV1-8P0DP01 117 aa12.45□□□□□ -0.42
DHFR-201ENST00000439211 MAPKAPK5-AS1Q8N8E1 139 aa12.45□□□□□ -0.42
DHFR-201ENST00000439211 OR10J6PQ8NGY7 276 aa12.45□□□□□ -0.42
DHFR-201ENST00000439211 SPANXA1Q9NS26 97 aa12.45□□□□□ -0.42
DHFR-201ENST00000439211 IGHV3OR16-8A0A075B7F1 116 aa12.44□□□□□ -0.42
DHFR-201ENST00000439211 Q6ZS92 163 aa12.44□□□□□ -0.42
DHFR-201ENST00000439211 C19orf71A6NCJ1 209 aa12.44□□□□□ -0.42
DHFR-201ENST00000439211 PIP4P1Q86T03 277 aa12.44□□□□□ -0.42
DHFR-201ENST00000439211 SLC25A20O43772 301 aa12.44□□□□□ -0.42
DHFR-201ENST00000439211 SRSF1Q07955 248 aaKnown RBP eCLIP12.44□□□□□ -0.42
DHFR-201ENST00000439211 NTN5Q8WTR8 489 aaPredicted RBP12.44□□□□□ -0.42
DHFR-201ENST00000439211 OR11H6Q8NGC7 330 aa12.43□□□□□ -0.42
DHFR-201ENST00000439211 LINC01560Q8TB33 94 aa12.43□□□□□ -0.42
DHFR-201ENST00000439211 PRO0461Q9UI25 63 aa12.43□□□□□ -0.42
DHFR-201ENST00000439211 IGHV4-39P01824 125 aa12.43□□□□□ -0.42
DHFR-201ENST00000439211 SCNM1Q9BWG6 230 aa12.43□□□□□ -0.42
DHFR-201ENST00000439211 A0A096LNJ9 63 aa12.43□□□□□ -0.42
DHFR-201ENST00000439211 TEX36Q5VZQ5 186 aa12.43□□□□□ -0.42
DHFR-201ENST00000439211 NXT2Q9NPJ8 142 aaKnown RBP12.43□□□□□ -0.42
DHFR-201ENST00000439211 ZNF56Q15929 161 aa12.42□□□□□ -0.42
DHFR-201ENST00000439211 IGHV3-23P01764 117 aa12.42□□□□□ -0.42
DHFR-201ENST00000439211 HERVK_113P61574 105 aa12.42□□□□□ -0.42
DHFR-201ENST00000439211 FHL3Q13643 280 aa12.42□□□□□ -0.42
DHFR-201ENST00000439211 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
DHFR-201ENST00000439211 MLST8Q9BVC4 326 aa12.42□□□□□ -0.42
DHFR-201ENST00000439211 CTSZQ9UBR2 303 aa12.42□□□□□ -0.42
DHFR-201ENST00000439211 ZNF256Q9Y2P7 627 aaPredicted RBP12.42□□□□□ -0.42
DHFR-201ENST00000439211 TMEM78Q5T7P6 136 aa12.42□□□□□ -0.42
DHFR-201ENST00000439211 C8orf46Q8TAG6 207 aa12.42□□□□□ -0.42
DHFR-201ENST00000439211 IGFBPL1Q8WX77 278 aa12.42□□□□□ -0.42
DHFR-201ENST00000439211 OTORQ9NRC9 128 aa12.42□□□□□ -0.42
DHFR-201ENST00000439211 LOXP28300 417 aaPredicted RBP12.41□□□□□ -0.42
DHFR-201ENST00000439211 RPL13AP40429 203 aaKnown RBP12.41□□□□□ -0.42
DHFR-201ENST00000439211 SIGLEC9Q9Y336 463 aa12.41□□□□□ -0.42
DHFR-201ENST00000439211 TNRC18O15417 2968 aaPredicted RBP12.41□□□□□ -0.42
DHFR-201ENST00000439211 LY6HO94772 140 aa12.41□□□□□ -0.42
DHFR-201ENST00000439211 ASIPP42127 132 aa12.41□□□□□ -0.42
DHFR-201ENST00000439211 CARD19Q96LW7 228 aa12.41□□□□□ -0.42
DHFR-201ENST00000439211 TMEM126AQ9H061 195 aa12.41□□□□□ -0.42
DHFR-201ENST00000439211 M0R3E3 92 aa12.4□□□□□ -0.42
DHFR-201ENST00000439211 NUP37Q8NFH4 326 aa12.4□□□□□ -0.42
DHFR-201ENST00000439211 ARHGAP32A7KAX9 2087 aa12.4□□□□□ -0.42
DHFR-201ENST00000439211 AJUBAQ96IF1 538 aa12.4□□□□□ -0.42
DHFR-201ENST00000439211 SLC25A39Q9BZJ4 359 aaPredicted RBP12.4□□□□□ -0.42
DHFR-201ENST00000439211 C7orf69Q9H7B7 122 aa12.4□□□□□ -0.43
DHFR-201ENST00000439211 TRGV9Q99603 122 aa12.39□□□□□ -0.43
DHFR-201ENST00000439211 CHCHD5Q9BSY4 110 aa12.39□□□□□ -0.43
DHFR-201ENST00000439211 IGF2RP11717 2491 aa12.39□□□□□ -0.43
DHFR-201ENST00000439211 IGHV1-3A0A0C4DH29 117 aa12.39□□□□□ -0.43
DHFR-201ENST00000439211 SMCPP49901 116 aaPredicted RBP12.39□□□□□ -0.43
DHFR-201ENST00000439211 Q6ZQT7 251 aa12.39□□□□□ -0.43
DHFR-201ENST00000439211 TCL1BO95988 128 aa12.39□□□□□ -0.43
DHFR-201ENST00000439211 OR13C6PQ8NH95 151 aa12.39□□□□□ -0.43
DHFR-201ENST00000439211 TIMD4Q96H15 378 aa12.39□□□□□ -0.43
DHFR-201ENST00000439211 IGKV1D-37A0A075B6S9 117 aa12.38□□□□□ -0.43
DHFR-201ENST00000439211 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.38□□□□□ -0.43
DHFR-201ENST00000439211 NHLRC4P0CG21 123 aaPredicted RBP12.38□□□□□ -0.43
DHFR-201ENST00000439211 WNK1Q9H4A3 2382 aa12.38□□□□□ -0.43
DHFR-201ENST00000439211 PTPRQQ9UMZ3 2332 aa12.38□□□□□ -0.43
DHFR-201ENST00000439211 TIMM23O14925 209 aa12.38□□□□□ -0.43
DHFR-201ENST00000439211 TNFRSF6BO95407 300 aa12.37□□□□□ -0.43
DHFR-201ENST00000439211 LINC01548A6NM66 108 aa12.37□□□□□ -0.43
DHFR-201ENST00000439211 E7EQL1 145 aa12.37□□□□□ -0.43
DHFR-201ENST00000439211 CRLF1O75462 422 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms