RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 RAB14P61106 215 aa11.6□□□□□ -0.55
SNRPB-202ENST00000438552 PMS2P11Q13670 270 aa11.6□□□□□ -0.55
SNRPB-202ENST00000438552 CLLU1Q5K131 121 aa11.6□□□□□ -0.55
SNRPB-202ENST00000438552 CCDC28AQ8IWP9 274 aa11.6□□□□□ -0.55
SNRPB-202ENST00000438552 TMEM75Q8N9X5 138 aa11.6□□□□□ -0.55
SNRPB-202ENST00000438552 LINC00479Q96M42 142 aa11.6□□□□□ -0.55
SNRPB-202ENST00000438552 TMEM189A5PLL7 270 aa11.59□□□□□ -0.55
SNRPB-202ENST00000438552 TEX46H3BTG2 121 aa11.59□□□□□ -0.55
SNRPB-202ENST00000438552 ZNF324O75467 553 aaPredicted RBP11.59□□□□□ -0.55
SNRPB-202ENST00000438552 PPT1P50897 306 aa11.59□□□□□ -0.55
SNRPB-202ENST00000438552 NANOS2P60321 138 aaKnown RBP11.59□□□□□ -0.55
SNRPB-202ENST00000438552 BLOC1S1P78537 153 aa11.59□□□□□ -0.55
SNRPB-202ENST00000438552 FLI1Q01543 452 aaPredicted RBP11.59□□□□□ -0.55
SNRPB-202ENST00000438552 PRNTQ86SH4 94 aa11.59□□□□□ -0.55
SNRPB-202ENST00000438552 C11orf45Q8TAV5 145 aa11.59□□□□□ -0.55
SNRPB-202ENST00000438552 TREM1Q9NP99 234 aa11.59□□□□□ -0.55
SNRPB-202ENST00000438552 MANBALQ9NQG1 85 aa11.59□□□□□ -0.55
SNRPB-202ENST00000438552 PSG8Q9UQ74 426 aa11.59□□□□□ -0.55
SNRPB-202ENST00000438552 Q86TA4 180 aa11.58□□□□□ -0.56
SNRPB-202ENST00000438552 HIST1H2BAQ96A08 127 aa11.58□□□□□ -0.56
SNRPB-202ENST00000438552 C8orf49Q96NF6 230 aa11.58□□□□□ -0.56
SNRPB-202ENST00000438552 NDFIP1Q9BT67 221 aa11.58□□□□□ -0.56
SNRPB-202ENST00000438552 SCO2A0A1W2PP80 73 aa11.57□□□□□ -0.56
SNRPB-202ENST00000438552 PLAC8L1A1L4L8 177 aa11.57□□□□□ -0.56
SNRPB-202ENST00000438552 CXorf65A6NEN9 183 aa11.57□□□□□ -0.56
SNRPB-202ENST00000438552 C11orf94C9JXX5 98 aa11.57□□□□□ -0.56
SNRPB-202ENST00000438552 C3orf84H3BNL1 204 aa11.57□□□□□ -0.56
SNRPB-202ENST00000438552 RNASE8Q8TDE3 154 aaKnown RBP11.57□□□□□ -0.56
SNRPB-202ENST00000438552 C16orf74Q96GX8 76 aa11.57□□□□□ -0.56
SNRPB-202ENST00000438552 PYGO2Q9BRQ0 406 aa11.57□□□□□ -0.56
SNRPB-202ENST00000438552 TCEAL7Q9BRU2 100 aa11.57□□□□□ -0.56
SNRPB-202ENST00000438552 AKR1C3P42330 323 aa11.56□□□□□ -0.56
SNRPB-202ENST00000438552 FAM222AQ5U5X8 452 aa11.56□□□□□ -0.56
SNRPB-202ENST00000438552 Q6AWC8 147 aa11.56□□□□□ -0.56
SNRPB-202ENST00000438552 LYPD6BQ8NI32 183 aa11.56□□□□□ -0.56
SNRPB-202ENST00000438552 TMEM263Q8WUH6 116 aaKnown RBP11.56□□□□□ -0.56
SNRPB-202ENST00000438552 FBLL1A6NHQ2 334 aaKnown RBP11.55□□□□□ -0.56
SNRPB-202ENST00000438552 MUC21Q5SSG8 566 aa11.55□□□□□ -0.56
SNRPB-202ENST00000438552 CASC10Q5T4H9 136 aa11.55□□□□□ -0.56
SNRPB-202ENST00000438552 DKK2Q9UBU2 259 aa11.55□□□□□ -0.56
SNRPB-202ENST00000438552 IGHV1OR15-1A0A075B7D0 117 aa11.54□□□□□ -0.56
SNRPB-202ENST00000438552 CBY3A6NI87 242 aa11.54□□□□□ -0.56
SNRPB-202ENST00000438552 IFNA1P01562 189 aa11.54□□□□□ -0.56
SNRPB-202ENST00000438552 SPART-AS1P0CW21 52 aa11.54□□□□□ -0.56
SNRPB-202ENST00000438552 ZNF80P51504 273 aaPredicted RBP11.54□□□□□ -0.56
SNRPB-202ENST00000438552 UBE2G1P62253 170 aa11.54□□□□□ -0.56
SNRPB-202ENST00000438552 ZNF493Q6ZR52 646 aa11.54□□□□□ -0.56
SNRPB-202ENST00000438552 Q6ZTC4 211 aa11.54□□□□□ -0.56
SNRPB-202ENST00000438552 EIF4E3Q8N5X7 224 aaKnown RBP11.54□□□□□ -0.56
SNRPB-202ENST00000438552 C2CD4CQ8TF44 421 aa11.54□□□□□ -0.56
SNRPB-202ENST00000438552 PCNPQ8WW12 178 aaKnown RBP11.54□□□□□ -0.56
SNRPB-202ENST00000438552 FMC1Q96HJ9 113 aa11.54□□□□□ -0.56
SNRPB-202ENST00000438552 LINC00467Q9BRT7 94 aa11.54□□□□□ -0.56
SNRPB-202ENST00000438552 NAGKQ9UJ70 344 aa11.54□□□□□ -0.56
SNRPB-202ENST00000438552 TP53TG3Q9ULZ0 132 aa11.54□□□□□ -0.56
SNRPB-202ENST00000438552 GCGP01275 180 aa11.53□□□□□ -0.56
SNRPB-202ENST00000438552 BCL2P10415 239 aa11.53□□□□□ -0.56
SNRPB-202ENST00000438552 C12orf74Q32Q52 190 aa11.53□□□□□ -0.56
SNRPB-202ENST00000438552 PHLDA1Q8WV24 401 aaPredicted RBP11.53□□□□□ -0.56
SNRPB-202ENST00000438552 KLF12Q9Y4X4 402 aa11.53□□□□□ -0.56
SNRPB-202ENST00000438552 TRAV21A0A0B4J279 112 aa11.52□□□□□ -0.57
SNRPB-202ENST00000438552 TEX48A0A1B0GUV7 120 aa11.52□□□□□ -0.57
SNRPB-202ENST00000438552 MEF2BQ02080 365 aaPredicted RBP11.52□□□□□ -0.57
SNRPB-202ENST00000438552 ANXA2RQ3ZCQ2 193 aa11.52□□□□□ -0.57
SNRPB-202ENST00000438552 SMUG1Q53HV7 270 aa11.52□□□□□ -0.57
SNRPB-202ENST00000438552 SAPCD1Q5SSQ6 148 aa11.52□□□□□ -0.57
SNRPB-202ENST00000438552 NOP10Q9NPE3 64 aaKnown RBP11.52□□□□□ -0.57
SNRPB-202ENST00000438552 MED9Q9NWA0 146 aa11.52□□□□□ -0.57
SNRPB-202ENST00000438552 DYNC2H1Q8NCM8 4307 aaKnown RBP11.52□□□□□ -0.57
SNRPB-202ENST00000438552 LINC00862A6NCI5 91 aa11.51□□□□□ -0.57
SNRPB-202ENST00000438552 LYRM9A8MSI8 78 aa11.51□□□□□ -0.57
SNRPB-202ENST00000438552 TMEM183BQ1AE95 376 aa11.51□□□□□ -0.57
SNRPB-202ENST00000438552 C11orf72Q8NBR9 251 aa11.51□□□□□ -0.57
SNRPB-202ENST00000438552 C11orf52Q96A22 123 aa11.51□□□□□ -0.57
SNRPB-202ENST00000438552 DERL1Q9BUN8 251 aa11.51□□□□□ -0.57
SNRPB-202ENST00000438552 GSN-AS1Q9NRJ2 163 aa11.51□□□□□ -0.57
SNRPB-202ENST00000438552 TIMM8BQ9Y5J9 83 aaPredicted RBP11.51□□□□□ -0.57
SNRPB-202ENST00000438552 TENM2Q9NT68 2774 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 TRBV6-1A0A0K0K1D8 114 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 NUPR2A6NF83 97 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 SNURFLB1AK76 121 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 LTAP01374 205 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 DAD1P61803 113 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 NDUFA5Q16718 116 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 FAM159AQ6UWV7 190 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 TMEM183AQ8IXX5 376 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 NHLRC2Q8NBF2 726 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 ZC2HC1AQ96GY0 325 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 TXNDC17Q9BRA2 123 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 VAX2Q9UIW0 290 aa11.5□□□□□ -0.57
SNRPB-202ENST00000438552 PFN1P07737 140 aaKnown RBP11.49□□□□□ -0.57
SNRPB-202ENST00000438552 DEFB130BP0DP73 79 aa11.49□□□□□ -0.57
SNRPB-202ENST00000438552 DEFB130AP0DP74 79 aa11.49□□□□□ -0.57
SNRPB-202ENST00000438552 CEMP1Q6PRD7 247 aaPredicted RBP11.49□□□□□ -0.57
SNRPB-202ENST00000438552 C11orf21Q9P2W6 132 aa11.49□□□□□ -0.57
SNRPB-202ENST00000438552 ZFP30Q9Y2G7 519 aa11.49□□□□□ -0.57
SNRPB-202ENST00000438552 TRAV10A0A0B4J240 114 aa11.48□□□□□ -0.57
SNRPB-202ENST00000438552 PDE6DO43924 150 aa11.48□□□□□ -0.57
SNRPB-202ENST00000438552 S100A9P06702 114 aaKnown RBP11.48□□□□□ -0.57
SNRPB-202ENST00000438552 RPL35P42766 123 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms