RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 IGKV1D-16P01601 117 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 IGHV3-33P01772 117 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 COX6CP09669 75 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 RBMY1DP0C7P1 496 aaKnown RBP4.98□□□□□ -1.61
MCF2-205ENST00000437564 RBMY1A1P0DJD3 496 aaKnown RBP4.98□□□□□ -1.61
MCF2-205ENST00000437564 RBMY1CP0DJD4 496 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 RBMY1FQ15415 496 aaKnown RBP4.98□□□□□ -1.61
MCF2-205ENST00000437564 Q6JHZ5 121 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 SFTA2Q6UW10 78 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 SCGB1D4Q6XE38 83 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 ORMDL3Q8N138 153 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 PGLYRP4Q96LB8 373 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 SPACA5Q96QH8 159 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 TRBV27A0A0K0K1C4 114 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 IGKV1-5P01602 117 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 DEFA4P12838 97 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 ZNF137PP52743 207 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 DAD1P61803 113 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 GFRALQ6UXV0 394 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 SEM1Q6ZVN7 128 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 SMCR5Q8TEV8 140 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 ZNF714Q96N38 554 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 SMIM14Q96QK8 99 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 THADAQ6YHU6 1953 aa4.98□□□□□ -1.61
MCF2-205ENST00000437564 HEATR1Q9H583 2144 aaKnown RBP4.97□□□□□ -1.61
MCF2-205ENST00000437564 TRAV12-1A0A0B4J245 112 aa4.97□□□□□ -1.61
MCF2-205ENST00000437564 H7BZZ5 65 aa4.97□□□□□ -1.61
MCF2-205ENST00000437564 RFPL3SP0C7P2 107 aa4.97□□□□□ -1.61
MCF2-205ENST00000437564 XCL1P47992 114 aa4.97□□□□□ -1.61
MCF2-205ENST00000437564 FGF12P61328 243 aa4.97□□□□□ -1.61
MCF2-205ENST00000437564 SS18Q15532 418 aa4.97□□□□□ -1.61
MCF2-205ENST00000437564 NSUN5P1Q3KNT7 163 aa4.97□□□□□ -1.61
MCF2-205ENST00000437564 TMEM75Q8N9X5 138 aa4.97□□□□□ -1.61
MCF2-205ENST00000437564 RNASE6Q93091 150 aaKnown RBP4.97□□□□□ -1.61
MCF2-205ENST00000437564 CCL28Q9NRJ3 127 aa4.97□□□□□ -1.61
MCF2-205ENST00000437564 XCL2Q9UBD3 114 aa4.97□□□□□ -1.61
MCF2-205ENST00000437564 MYO7AQ13402 2215 aa4.96□□□□□ -1.61
MCF2-205ENST00000437564 IGKV1-9A0A0C4DH69 117 aa4.96□□□□□ -1.61
MCF2-205ENST00000437564 IBA57-AS1B1ANH7 110 aa4.96□□□□□ -1.61
MCF2-205ENST00000437564 C8orf87E5RJ46 101 aa4.96□□□□□ -1.61
MCF2-205ENST00000437564 IGKV1-39P01597 117 aa4.96□□□□□ -1.61
MCF2-205ENST00000437564 IGKV1D-39P04432 117 aa4.96□□□□□ -1.61
MCF2-205ENST00000437564 ECSCRQ19T08 205 aa4.96□□□□□ -1.61
MCF2-205ENST00000437564 DCANP1Q8TF63 244 aa4.96□□□□□ -1.61
MCF2-205ENST00000437564 C11orf68Q9H3H3 251 aaKnown RBP4.96□□□□□ -1.61
MCF2-205ENST00000437564 COL4A3Q01955 1670 aa4.96□□□□□ -1.61
MCF2-205ENST00000437564 IGKV1D-42A0A075B6H8 117 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 TRAV3A0A0B4J244 114 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 TRAV40A0A0B4J280 105 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 UBE2L6O14933 153 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 IGHV3-30P01768 117 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 INAFM2P0DMQ5 153 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 IGHV3-30-5P0DP03 117 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 CD24P25063 80 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 KLKP1Q107X0 134 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 Q8N2B8 174 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 SPATA3Q8NHX4 192 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 Q9H3A6 140 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 TANC2Q9HCD6 1990 aa4.96□□□□□ -1.62
MCF2-205ENST00000437564 ARHGEF17Q96PE2 2063 aaPredicted RBP4.95□□□□□ -1.62
MCF2-205ENST00000437564 M0R135 149 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 RBM3P98179 157 aaKnown RBP4.95□□□□□ -1.62
MCF2-205ENST00000437564 RHOHQ15669 191 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 FAM223AQ8IWN6 122 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 C6orf223Q8N319 242 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 SLC25A29Q8N8R3 303 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 PROK2Q9HC23 129 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 GON4LQ3T8J9 2241 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 IGKV1D-13A0A0B4J2D9 117 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 LOC101059948A0A1B0GTJ6 334 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 ZNF815PA8K554 130 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 P0C879 139 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 IGKV1-13P0DP09 117 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 PLA2G5P39877 138 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 TCF15Q12870 199 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 CRIP3Q6Q6R5 217 aa4.95□□□□□ -1.62
MCF2-205ENST00000437564 TMEM263Q8WUH6 116 aaKnown RBP4.95□□□□□ -1.62
MCF2-205ENST00000437564 LTBP1Q14766 1721 aa4.94□□□□□ -1.62
MCF2-205ENST00000437564 F8VRH5 84 aa4.94□□□□□ -1.62
MCF2-205ENST00000437564 M0R378 163 aa4.94□□□□□ -1.62
MCF2-205ENST00000437564 IGHV4-39P01824 125 aa4.94□□□□□ -1.62
MCF2-205ENST00000437564 ZNF542PQ5EBM4 170 aa4.94□□□□□ -1.62
MCF2-205ENST00000437564 GUSBP11Q6P575 273 aa4.94□□□□□ -1.62
MCF2-205ENST00000437564 LYPD5Q6UWN5 251 aa4.94□□□□□ -1.62
MCF2-205ENST00000437564 UNQ9165/PRO28630Q6UXU0 137 aa4.94□□□□□ -1.62
MCF2-205ENST00000437564 MKXQ8IYA7 352 aa4.94□□□□□ -1.62
MCF2-205ENST00000437564 TIMM21Q9BVV7 248 aa4.94□□□□□ -1.62
MCF2-205ENST00000437564 ZNF71Q9NQZ8 489 aaPredicted RBP4.94□□□□□ -1.62
MCF2-205ENST00000437564 MRPL35Q9NZE8 188 aaKnown RBP4.94□□□□□ -1.62
MCF2-205ENST00000437564 TRAV13-2A0A0B4J235 113 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 LOC389332A0A1B0GUA5 103 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 D6R8Y8 96 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 LST1O00453 97 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 NXPH4O95158 308 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 CKS2P33552 79 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 LINC00474Q9P2X8 69 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 FREM3P0C091 2139 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 LRP4O75096 1905 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 A0A0J9YY99 117 aa4.93□□□□□ -1.62
MCF2-205ENST00000437564 FAM223BA6NKX1 122 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms