RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 ODF3Q96PU9 254 aa11.6□□□□□ -0.55
SGCE-205ENST00000437425 ORM1P02763 201 aa11.59□□□□□ -0.55
SGCE-205ENST00000437425 SMIM6P0DI80 62 aa11.59□□□□□ -0.55
SGCE-205ENST00000437425 CAMPP49913 170 aa11.59□□□□□ -0.55
SGCE-205ENST00000437425 ZNF80P51504 273 aaPredicted RBP11.59□□□□□ -0.55
SGCE-205ENST00000437425 RIPPLY3P57055 190 aa11.59□□□□□ -0.55
SGCE-205ENST00000437425 TLN2Q9Y4G6 2542 aa11.58□□□□□ -0.56
SGCE-205ENST00000437425 TRAV21A0A0B4J279 112 aa11.58□□□□□ -0.56
SGCE-205ENST00000437425 GZMBP10144 247 aa11.58□□□□□ -0.56
SGCE-205ENST00000437425 CTRLP40313 264 aa11.58□□□□□ -0.56
SGCE-205ENST00000437425 SLURP1P55000 103 aa11.58□□□□□ -0.56
SGCE-205ENST00000437425 APRG1Q8IVJ8 170 aa11.58□□□□□ -0.56
SGCE-205ENST00000437425 FER1L6-AS1Q8NA97 138 aa11.58□□□□□ -0.56
SGCE-205ENST00000437425 TMEM18Q96B42 140 aa11.58□□□□□ -0.56
SGCE-205ENST00000437425 FAM19A4Q96LR4 140 aa11.58□□□□□ -0.56
SGCE-205ENST00000437425 IGKV3-7A0A075B6H7 116 aa11.57□□□□□ -0.56
SGCE-205ENST00000437425 FRMD6-AS1P0C7T7 363 aa11.57□□□□□ -0.56
SGCE-205ENST00000437425 ESDP10768 282 aa11.57□□□□□ -0.56
SGCE-205ENST00000437425 FHL3Q13643 280 aa11.57□□□□□ -0.56
SGCE-205ENST00000437425 Q71RC1 249 aaPredicted RBP11.57□□□□□ -0.56
SGCE-205ENST00000437425 LINC00518Q8N0U6 118 aa11.57□□□□□ -0.56
SGCE-205ENST00000437425 TCF21O43680 179 aa11.56□□□□□ -0.56
SGCE-205ENST00000437425 DUSP14O95147 198 aaKnown RBP11.56□□□□□ -0.56
SGCE-205ENST00000437425 IGLC6P0CF74 106 aa11.56□□□□□ -0.56
SGCE-205ENST00000437425 SLAQ13239 276 aa11.56□□□□□ -0.56
SGCE-205ENST00000437425 DEFB136Q30KP8 78 aa11.56□□□□□ -0.56
SGCE-205ENST00000437425 DMRTA1Q5VZB9 504 aa11.56□□□□□ -0.56
SGCE-205ENST00000437425 EBLN2Q6P2I7 272 aa11.56□□□□□ -0.56
SGCE-205ENST00000437425 C18orf65Q6ZTR6 163 aa11.56□□□□□ -0.56
SGCE-205ENST00000437425 BAGE3Q86Y29 109 aa11.56□□□□□ -0.56
SGCE-205ENST00000437425 PACRGQ96M98 296 aaPredicted RBP11.56□□□□□ -0.56
SGCE-205ENST00000437425 SMR3AQ99954 134 aa11.56□□□□□ -0.56
SGCE-205ENST00000437425 CNFNQ9BYD5 112 aa11.56□□□□□ -0.56
SGCE-205ENST00000437425 SIGLEC8Q9NYZ4 499 aa11.56□□□□□ -0.56
SGCE-205ENST00000437425 F8P00451 2351 aa11.56□□□□□ -0.56
SGCE-205ENST00000437425 TRAV25A0A0B4J276 109 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 PRB4P10163 310 aaPredicted RBP11.55□□□□□ -0.56
SGCE-205ENST00000437425 LEPP41159 167 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 GDF5OSQ5U4N7 250 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 LYZL1Q6UWQ5 148 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 ZNF493Q6ZR52 646 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 DYNLRB2Q8TF09 96 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 RNF114Q9Y508 228 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 A0A1B0GUS0 222 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 CCL24O00175 119 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 GPX1P07203 203 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 ARMS2P0C7Q2 107 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 EDN2P20800 178 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 SRIP30626 198 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 GFI1BQ5VTD9 330 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 WFDC3Q8IUB2 231 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 ZFAND2AQ8N6M9 145 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 DLX4Q92988 240 aaPredicted RBP11.55□□□□□ -0.56
SGCE-205ENST00000437425 HIST1H2BLQ99880 126 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 TPPP3Q9BW30 176 aa11.55□□□□□ -0.56
SGCE-205ENST00000437425 SONP18583 2426 aaKnown RBP11.54□□□□□ -0.56
SGCE-205ENST00000437425 TMSB15BA0A087X1C1 80 aa11.54□□□□□ -0.56
SGCE-205ENST00000437425 IFITM10A6NMD0 228 aa11.54□□□□□ -0.56
SGCE-205ENST00000437425 CSN3P07498 182 aa11.54□□□□□ -0.56
SGCE-205ENST00000437425 CD28P10747 220 aa11.54□□□□□ -0.56
SGCE-205ENST00000437425 FABP4P15090 132 aa11.54□□□□□ -0.56
SGCE-205ENST00000437425 TSPOP30536 169 aa11.54□□□□□ -0.56
SGCE-205ENST00000437425 PSMG4Q5JS54 123 aa11.54□□□□□ -0.56
SGCE-205ENST00000437425 FOXI2Q6ZQN5 318 aa11.54□□□□□ -0.56
SGCE-205ENST00000437425 SETD2Q9BYW2 2564 aaPredicted RBP11.54□□□□□ -0.56
SGCE-205ENST00000437425 HIVEP2P31629 2446 aa11.53□□□□□ -0.56
SGCE-205ENST00000437425 A0A0J9YX75 114 aa11.53□□□□□ -0.56
SGCE-205ENST00000437425 GRIFINA4D1Z8 144 aa11.53□□□□□ -0.56
SGCE-205ENST00000437425 ZNF688P0C7X2 276 aa11.53□□□□□ -0.56
SGCE-205ENST00000437425 ADAMTSL5Q6ZMM2 481 aa11.53□□□□□ -0.56
SGCE-205ENST00000437425 RAX2Q96IS3 184 aa11.53□□□□□ -0.56
SGCE-205ENST00000437425 ALKBH7Q9BT30 221 aaPredicted RBP11.53□□□□□ -0.56
SGCE-205ENST00000437425 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.57
SGCE-205ENST00000437425 IGKV3D-20A0A0C4DH25 116 aa11.52□□□□□ -0.57
SGCE-205ENST00000437425 KLLNB2CW77 178 aa11.52□□□□□ -0.57
SGCE-205ENST00000437425 OR5AL1P0C617 328 aa11.52□□□□□ -0.57
SGCE-205ENST00000437425 ZNF705DP0CH99 300 aaPredicted RBP11.52□□□□□ -0.57
SGCE-205ENST00000437425 ZNF705BP0CI00 300 aaPredicted RBP11.52□□□□□ -0.57
SGCE-205ENST00000437425 MED14OSP0DP75 135 aa11.52□□□□□ -0.57
SGCE-205ENST00000437425 TFPI2P48307 235 aa11.52□□□□□ -0.57
SGCE-205ENST00000437425 PROK1P58294 105 aa11.52□□□□□ -0.57
SGCE-205ENST00000437425 CACNG7P62955 275 aa11.52□□□□□ -0.57
SGCE-205ENST00000437425 KIAA1644Q3SXP7 199 aa11.52□□□□□ -0.57
SGCE-205ENST00000437425 PDZD11Q5EBL8 140 aa11.52□□□□□ -0.57
SGCE-205ENST00000437425 OR10D4PQ8NGN7 298 aa11.52□□□□□ -0.57
SGCE-205ENST00000437425 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.57
SGCE-205ENST00000437425 OR4C46A6NHA9 309 aa11.51□□□□□ -0.57
SGCE-205ENST00000437425 AMBPP02760 352 aa11.51□□□□□ -0.57
SGCE-205ENST00000437425 ANK3Q12955 4377 aaKnown RBP11.51□□□□□ -0.57
SGCE-205ENST00000437425 DNLZQ5SXM8 178 aa11.51□□□□□ -0.57
SGCE-205ENST00000437425 C12orf57Q99622 126 aa11.51□□□□□ -0.57
SGCE-205ENST00000437425 SPAG8Q99932 426 aaPredicted RBP11.51□□□□□ -0.57
SGCE-205ENST00000437425 SSBP4Q9BWG4 385 aaPredicted RBP11.51□□□□□ -0.57
SGCE-205ENST00000437425 ACANP16112 2415 aa11.51□□□□□ -0.57
SGCE-205ENST00000437425 F6UB75 175 aa11.5□□□□□ -0.57
SGCE-205ENST00000437425 TWIST1Q15672 202 aa11.5□□□□□ -0.57
SGCE-205ENST00000437425 DEFB114Q30KQ6 69 aa11.5□□□□□ -0.57
SGCE-205ENST00000437425 SMIM15Q7Z3B0 74 aa11.5□□□□□ -0.57
SGCE-205ENST00000437425 C18orf32Q8TCD1 76 aa11.5□□□□□ -0.57
SGCE-205ENST00000437425 KCNS1Q96KK3 526 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms