RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 UPK3BQ9BT76 320 aa12.19□□□□□ -0.46
SBDSP1-203ENST00000437201 OTORQ9NRC9 128 aa12.19□□□□□ -0.46
SBDSP1-203ENST00000437201 KLF12Q9Y4X4 402 aa12.19□□□□□ -0.46
SBDSP1-203ENST00000437201 PRR9Q5T870 116 aa12.18□□□□□ -0.46
SBDSP1-203ENST00000437201 ST6GAL2Q96JF0 529 aa12.18□□□□□ -0.46
SBDSP1-203ENST00000437201 DNAH2Q9P225 4427 aa12.17□□□□□ -0.46
SBDSP1-203ENST00000437201 PGPA6NDG6 321 aa12.17□□□□□ -0.46
SBDSP1-203ENST00000437201 PTTG1O95997 202 aa12.17□□□□□ -0.46
SBDSP1-203ENST00000437201 ESRGQ1W209 222 aa12.17□□□□□ -0.46
SBDSP1-203ENST00000437201 HYLS1Q96M11 299 aa12.17□□□□□ -0.46
SBDSP1-203ENST00000437201 WFDC1Q9HC57 220 aa12.17□□□□□ -0.46
SBDSP1-203ENST00000437201 TP53TG3Q9ULZ0 132 aa12.17□□□□□ -0.46
SBDSP1-203ENST00000437201 MRPS16Q9Y3D3 137 aaKnown RBP12.17□□□□□ -0.46
SBDSP1-203ENST00000437201 ALG5Q9Y673 324 aa12.17□□□□□ -0.46
SBDSP1-203ENST00000437201 DNAH17Q9UFH2 4485 aa12.17□□□□□ -0.46
SBDSP1-203ENST00000437201 A0A1W2PPQ1 181 aa12.16□□□□□ -0.46
SBDSP1-203ENST00000437201 BTF3P20290 206 aaKnown RBP12.16□□□□□ -0.46
SBDSP1-203ENST00000437201 Q6AWC8 147 aa12.16□□□□□ -0.46
SBDSP1-203ENST00000437201 FAM159AQ6UWV7 190 aa12.16□□□□□ -0.46
SBDSP1-203ENST00000437201 OR10G4Q8NGN3 311 aa12.16□□□□□ -0.46
SBDSP1-203ENST00000437201 OR10G9Q8NGN4 311 aa12.16□□□□□ -0.46
SBDSP1-203ENST00000437201 OR10G7Q8NGN6 311 aa12.16□□□□□ -0.46
SBDSP1-203ENST00000437201 MED28Q9H204 178 aa12.16□□□□□ -0.46
SBDSP1-203ENST00000437201 FAT2Q9NYQ8 4349 aa12.15□□□□□ -0.46
SBDSP1-203ENST00000437201 TRGV11A0A075B6L2 103 aa12.15□□□□□ -0.46
SBDSP1-203ENST00000437201 PAX4O43316 350 aa12.15□□□□□ -0.46
SBDSP1-203ENST00000437201 ASB13Q8WXK3 278 aa12.15□□□□□ -0.46
SBDSP1-203ENST00000437201 VSIG2Q96IQ7 327 aa12.15□□□□□ -0.46
SBDSP1-203ENST00000437201 SPXQ9BT56 116 aa12.15□□□□□ -0.46
SBDSP1-203ENST00000437201 MRPL16Q9NX20 251 aaKnown RBP12.15□□□□□ -0.46
SBDSP1-203ENST00000437201 PRO0255Q9UI72 69 aa12.15□□□□□ -0.46
SBDSP1-203ENST00000437201 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
SBDSP1-203ENST00000437201 HERC2O95714 4834 aa12.15□□□□□ -0.46
SBDSP1-203ENST00000437201 A0A096LPF7 62 aa12.14□□□□□ -0.47
SBDSP1-203ENST00000437201 MBP02144 154 aa12.14□□□□□ -0.47
SBDSP1-203ENST00000437201 MUC21Q5SSG8 566 aa12.14□□□□□ -0.47
SBDSP1-203ENST00000437201 HHLA3Q9XRX5 114 aa12.14□□□□□ -0.47
SBDSP1-203ENST00000437201 RAB2AP61019 212 aa12.13□□□□□ -0.47
SBDSP1-203ENST00000437201 TNP2Q05952 138 aa12.13□□□□□ -0.47
SBDSP1-203ENST00000437201 Q6ZQT7 251 aa12.13□□□□□ -0.47
SBDSP1-203ENST00000437201 OR2G3Q8NGZ4 309 aa12.13□□□□□ -0.47
SBDSP1-203ENST00000437201 RPH3ALQ9UNE2 315 aa12.13□□□□□ -0.47
SBDSP1-203ENST00000437201 SERTM2A0A1B0GWG4 89 aa12.12□□□□□ -0.47
SBDSP1-203ENST00000437201 IGHV3-53P01767 116 aa12.12□□□□□ -0.47
SBDSP1-203ENST00000437201 CDC34P49427 236 aaPredicted RBP12.12□□□□□ -0.47
SBDSP1-203ENST00000437201 SERF2P84101 59 aa12.12□□□□□ -0.47
SBDSP1-203ENST00000437201 TMEM183BQ1AE95 376 aa12.12□□□□□ -0.47
SBDSP1-203ENST00000437201 GOLT1AQ6ZVE7 132 aa12.12□□□□□ -0.47
SBDSP1-203ENST00000437201 TMEM183AQ8IXX5 376 aa12.12□□□□□ -0.47
SBDSP1-203ENST00000437201 AQP10Q96PS8 301 aa12.12□□□□□ -0.47
SBDSP1-203ENST00000437201 PSMG3Q9BT73 122 aaPredicted RBP12.12□□□□□ -0.47
SBDSP1-203ENST00000437201 TRAV21A0A0B4J279 112 aa12.11□□□□□ -0.47
SBDSP1-203ENST00000437201 TRGV4A0A0C4DH28 118 aa12.11□□□□□ -0.47
SBDSP1-203ENST00000437201 K7EQM0 130 aa12.11□□□□□ -0.47
SBDSP1-203ENST00000437201 MRPL23Q16540 153 aaKnown RBP12.11□□□□□ -0.47
SBDSP1-203ENST00000437201 TDRG1Q3Y452 100 aa12.11□□□□□ -0.47
SBDSP1-203ENST00000437201 HSD17B11Q8NBQ5 300 aa12.11□□□□□ -0.47
SBDSP1-203ENST00000437201 RASL10AQ92737 203 aa12.11□□□□□ -0.47
SBDSP1-203ENST00000437201 MDFICQ9P1T7 246 aa12.11□□□□□ -0.47
SBDSP1-203ENST00000437201 EIF3GO75821 320 aaKnown RBP eCLIP12.1□□□□□ -0.47
SBDSP1-203ENST00000437201 ARL14EPLP0DKL9 152 aa12.1□□□□□ -0.47
SBDSP1-203ENST00000437201 CRYBA4P53673 196 aa12.1□□□□□ -0.47
SBDSP1-203ENST00000437201 IQCF2Q8IXL9 164 aa12.1□□□□□ -0.47
SBDSP1-203ENST00000437201 INO80EQ8NBZ0 244 aaPredicted RBP12.1□□□□□ -0.47
SBDSP1-203ENST00000437201 NDFIP1Q9BT67 221 aa12.1□□□□□ -0.47
SBDSP1-203ENST00000437201 TREM1Q9NP99 234 aa12.1□□□□□ -0.47
SBDSP1-203ENST00000437201 NAGKQ9UJ70 344 aa12.1□□□□□ -0.47
SBDSP1-203ENST00000437201 PKHD1P08F94 4074 aa12.1□□□□□ -0.47
SBDSP1-203ENST00000437201 SIVA1O15304 175 aa12.09□□□□□ -0.47
SBDSP1-203ENST00000437201 HMGB3O15347 200 aaKnown RBP12.09□□□□□ -0.47
SBDSP1-203ENST00000437201 GIPP09681 153 aaPredicted RBP12.09□□□□□ -0.47
SBDSP1-203ENST00000437201 STAG3L2P0CL84 134 aa12.09□□□□□ -0.47
SBDSP1-203ENST00000437201 STAG3L3P0CL85 134 aa12.09□□□□□ -0.47
SBDSP1-203ENST00000437201 FHL2Q14192 279 aa12.09□□□□□ -0.47
SBDSP1-203ENST00000437201 ZNF575Q86XF7 245 aa12.09□□□□□ -0.47
SBDSP1-203ENST00000437201 RAB24Q969Q5 203 aa12.09□□□□□ -0.47
SBDSP1-203ENST00000437201 KCNS1Q96KK3 526 aa12.09□□□□□ -0.47
SBDSP1-203ENST00000437201 C8orf49Q96NF6 230 aa12.09□□□□□ -0.47
SBDSP1-203ENST00000437201 PKD1P98161 4303 aa12.08□□□□□ -0.48
SBDSP1-203ENST00000437201 KIAA1109Q2LD37 5005 aa12.08□□□□□ -0.48
SBDSP1-203ENST00000437201 C16orf90A8MZG2 172 aa12.08□□□□□ -0.48
SBDSP1-203ENST00000437201 ATP6V0CP27449 155 aa12.08□□□□□ -0.48
SBDSP1-203ENST00000437201 NEGR1Q7Z3B1 354 aa12.08□□□□□ -0.48
SBDSP1-203ENST00000437201 C5orf17Q8NAS9 161 aa12.08□□□□□ -0.48
SBDSP1-203ENST00000437201 PCNPQ8WW12 178 aaKnown RBP12.08□□□□□ -0.48
SBDSP1-203ENST00000437201 ACTR3CQ9C0K3 210 aaPredicted RBP12.08□□□□□ -0.48
SBDSP1-203ENST00000437201 SDF2L1Q9HCN8 221 aa12.08□□□□□ -0.48
SBDSP1-203ENST00000437201 TMEM167BQ9NRX6 74 aa12.08□□□□□ -0.48
SBDSP1-203ENST00000437201 TNFSF18Q9UNG2 199 aa12.08□□□□□ -0.48
SBDSP1-203ENST00000437201 MUC4Q99102 2169 aa12.08□□□□□ -0.48
SBDSP1-203ENST00000437201 M0R2P5 195 aa12.07□□□□□ -0.48
SBDSP1-203ENST00000437201 CXorf1O96002 111 aa12.07□□□□□ -0.48
SBDSP1-203ENST00000437201 ORM1P02763 201 aa12.07□□□□□ -0.48
SBDSP1-203ENST00000437201 GCHFRP30047 84 aa12.07□□□□□ -0.48
SBDSP1-203ENST00000437201 SUN5Q8TC36 379 aa12.07□□□□□ -0.48
SBDSP1-203ENST00000437201 KRTAP1-5Q9BYS1 174 aa12.07□□□□□ -0.48
SBDSP1-203ENST00000437201 TRAV8-1A0A0A6YYK1 113 aa12.06□□□□□ -0.48
SBDSP1-203ENST00000437201 BORCS7-ASMTA0A0B4J1R7 106 aa12.06□□□□□ -0.48
SBDSP1-203ENST00000437201 TRAV4A0A0B4J268 109 aa12.06□□□□□ -0.48
SBDSP1-203ENST00000437201 NXPH4O95158 308 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms