RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 H3BTX0 84 aa8.16□□□□□ -1.1
HMGCL-204ENST00000436439 MGST1P10620 155 aaKnown RBP8.16□□□□□ -1.1
HMGCL-204ENST00000436439 OR5I1Q13606 314 aa8.16□□□□□ -1.1
HMGCL-204ENST00000436439 IBA57Q5T440 356 aaKnown RBP8.16□□□□□ -1.1
HMGCL-204ENST00000436439 EXOC3-AS1Q8N2X6 119 aa8.16□□□□□ -1.1
HMGCL-204ENST00000436439 DCANP1Q8TF63 244 aa8.16□□□□□ -1.1
HMGCL-204ENST00000436439 HYDINQ4G0P3 5121 aa8.16□□□□□ -1.1
HMGCL-204ENST00000436439 TRAV2A0A0B4J234 112 aa8.15□□□□□ -1.1
HMGCL-204ENST00000436439 IZUMO1RA6ND01 250 aa8.15□□□□□ -1.1
HMGCL-204ENST00000436439 TCRAP04437 139 aa8.15□□□□□ -1.1
HMGCL-204ENST00000436439 GNG5P63218 68 aa8.15□□□□□ -1.1
HMGCL-204ENST00000436439 COA6Q5JTJ3 125 aaKnown RBP8.15□□□□□ -1.1
HMGCL-204ENST00000436439 CMTM2Q8TAZ6 248 aa8.15□□□□□ -1.1
HMGCL-204ENST00000436439 TRAPPC1Q9Y5R8 145 aa8.15□□□□□ -1.1
HMGCL-204ENST00000436439 EPPK1P58107 5090 aaKnown RBP8.15□□□□□ -1.1
HMGCL-204ENST00000436439 TRAV8-2A0A0B4J237 113 aa8.14□□□□□ -1.11
HMGCL-204ENST00000436439 TRAV25A0A0B4J276 109 aa8.14□□□□□ -1.11
HMGCL-204ENST00000436439 SMIM27A0A1W2PRY6 76 aa8.14□□□□□ -1.11
HMGCL-204ENST00000436439 DIRC3C9JPN6 131 aa8.14□□□□□ -1.11
HMGCL-204ENST00000436439 S100A2P29034 98 aa8.14□□□□□ -1.11
HMGCL-204ENST00000436439 CSN1S1P47710 185 aa8.14□□□□□ -1.11
HMGCL-204ENST00000436439 RPL11P62913 178 aaKnown RBP8.14□□□□□ -1.11
HMGCL-204ENST00000436439 DEFB114Q30KQ6 69 aa8.14□□□□□ -1.11
HMGCL-204ENST00000436439 HIST3H2BBQ8N257 126 aa8.14□□□□□ -1.11
HMGCL-204ENST00000436439 LINC00479Q96M42 142 aa8.14□□□□□ -1.11
HMGCL-204ENST00000436439 C12orf57Q99622 126 aa8.14□□□□□ -1.11
HMGCL-204ENST00000436439 RNASE7Q9H1E1 156 aaKnown RBP8.14□□□□□ -1.11
HMGCL-204ENST00000436439 MS4A6AQ9H2W1 248 aa8.14□□□□□ -1.11
HMGCL-204ENST00000436439 ZNF492Q9P255 531 aa8.14□□□□□ -1.11
HMGCL-204ENST00000436439 DNAH1Q9P2D7 4330 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 TRAV34A0A0B4J273 112 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 LCE6AA0A183 80 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 RBAKDNA6NC62 111 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 FBLL1A6NHQ2 334 aaKnown RBP8.13□□□□□ -1.11
HMGCL-204ENST00000436439 ZNF705GA8MUZ8 300 aaPredicted RBP8.13□□□□□ -1.11
HMGCL-204ENST00000436439 K7EQG2 157 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 K7EQM0 130 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 GATCO43716 136 aaKnown RBP8.13□□□□□ -1.11
HMGCL-204ENST00000436439 LTAP01374 205 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 MT-ND6P03923 174 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 PAFAH1B2P68402 229 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 LCN12Q6JVE5 192 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 WDR73Q6P4I2 378 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 TMEM183AQ8IXX5 376 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 TMEM75Q8N9X5 138 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 OR2K2Q8NGT1 345 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 DYNLRB2Q8TF09 96 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 C16orf92Q96LL3 132 aa8.13□□□□□ -1.11
HMGCL-204ENST00000436439 XKRY2A2RUG3 117 aa8.12□□□□□ -1.11
HMGCL-204ENST00000436439 M0R3E3 92 aa8.12□□□□□ -1.11
HMGCL-204ENST00000436439 ID1P41134 155 aa8.12□□□□□ -1.11
HMGCL-204ENST00000436439 PSG3Q16557 428 aa8.12□□□□□ -1.11
HMGCL-204ENST00000436439 Q86TA4 180 aa8.12□□□□□ -1.11
HMGCL-204ENST00000436439 MLST8Q9BVC4 326 aa8.12□□□□□ -1.11
HMGCL-204ENST00000436439 GNB1LQ9BYB4 327 aa8.12□□□□□ -1.11
HMGCL-204ENST00000436439 RPH3ALQ9UNE2 315 aa8.12□□□□□ -1.11
HMGCL-204ENST00000436439 IFITM10A6NMD0 228 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 IGLV2-11P01706 119 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 HLA-DMBP28068 263 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 CT83Q5H943 113 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 IGFL4Q6B9Z1 124 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 RASL11AQ6T310 242 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 RBPMS2Q6ZRY4 209 aaKnown RBP8.11□□□□□ -1.11
HMGCL-204ENST00000436439 GOLT1AQ6ZVE7 132 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 TMEM61Q8N0U2 210 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 RNF182Q8N6D2 247 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 NHLRC2Q8NBF2 726 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 NUDT10Q8NFP7 164 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 NUDT11Q96G61 164 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 SPAG8Q99932 426 aaPredicted RBP8.11□□□□□ -1.11
HMGCL-204ENST00000436439 SPATA25Q9BR10 227 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 RETNQ9HD89 108 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 PPP1R14DQ9NXH3 145 aa8.11□□□□□ -1.11
HMGCL-204ENST00000436439 SNRPD3P62318 126 aaKnown RBP8.1□□□□□ -1.11
HMGCL-204ENST00000436439 CD300EQ496F6 205 aaPredicted RBP8.1□□□□□ -1.11
HMGCL-204ENST00000436439 LINC00322Q6ZN03 302 aaPredicted RBP8.1□□□□□ -1.11
HMGCL-204ENST00000436439 TSKUQ8WUA8 353 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 C20orf173Q96LM9 149 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 WFDC10AQ9H1F0 79 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 ZFP30Q9Y2G7 519 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 IGKV3-7A0A075B6H7 116 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 C19orf71A6NCJ1 209 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 ZNF705FA8MVS1 300 aaPredicted RBP8.1□□□□□ -1.11
HMGCL-204ENST00000436439 HLA-DQA1P01909 254 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 CD7P09564 240 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 GFI1BQ5VTD9 330 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 C9orf47Q6ZRZ4 202 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 COX8CQ7Z4L0 72 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 GTSCR1Q86UQ5 136 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 GBGT1Q8N5D6 347 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 ZNF738Q8NE65 137 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 OR4B1Q8NGF8 309 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 DAZAP1Q96EP5 407 aaKnown RBP8.1□□□□□ -1.11
HMGCL-204ENST00000436439 FAM110AQ9BQ89 295 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 MRPL18Q9H0U6 180 aaKnown RBP8.1□□□□□ -1.11
HMGCL-204ENST00000436439 RPP21Q9H633 154 aaKnown RBP8.1□□□□□ -1.11
HMGCL-204ENST00000436439 NAT8BQ9UHF3 227 aa8.1□□□□□ -1.11
HMGCL-204ENST00000436439 FAM231BA6NCW3 169 aa8.09□□□□□ -1.12
HMGCL-204ENST00000436439 A8MWL6 223 aa8.09□□□□□ -1.12
HMGCL-204ENST00000436439 SNURFLB1AK76 121 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms