RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ATG2AQ2TAZ0 1938 aa2.38□□□□□ -2.03
HMGB1P45-201ENST00000435986 MAGI1Q96QZ7 1491 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P45-201ENST00000435986 NUP98P52948 1817 aa2.38□□□□□ -2.03
HMGB1P45-201ENST00000435986 FRMPD1Q5SYB0 1578 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 hDV103S1A0JD37 113 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 FAM24AA6NFZ4 105 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 NPC2P61916 151 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 PYY3Q5JQD4 70 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 OR2T2Q6IF00 324 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 ATP11AUNQ6ZP68 121 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 ATP6V0E2Q8NHE4 81 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 LCN9Q8WX39 176 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 LSM10Q969L4 123 aaKnown RBP2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 VAMP8Q9BV40 100 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 CST11Q9H112 138 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 HHLA3Q9XRX5 114 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 KIF21BO75037 1637 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 CUX1P39880 1505 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 POLEQ07864 2286 aa2.37□□□□□ -2.03
HMGB1P45-201ENST00000435986 ADAMTS12P58397 1594 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 LTBP4Q8N2S1 1624 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 IGHV1-18A0A0C4DH31 117 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 IGHV1-24A0A0C4DH33 117 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 A0A1B0GU33 70 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 OOSP1A8MZH6 123 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 M0R233 179 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 EDF1O60869 148 aaKnown RBP2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 GYPBP06028 91 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 Q6ZQT0 140 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 Q6ZS92 163 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 Q8IYB0 196 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 Q8NAQ8 132 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 OR2T35Q8NGX2 323 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 OR8B2Q96RD0 313 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 MINOS1-NBL1R4GNA1 71 aa2.36□□□□□ -2.03
HMGB1P45-201ENST00000435986 MAP3K4Q9Y6R4 1608 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 QRICH2Q9H0J4 1663 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 TEX14Q8IWB6 1497 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 IGKV2D-26A0A0A0MRZ7 120 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 TRAV3A0A0B4J244 114 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 A6NN06 94 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 ZNF705FA8MVS1 300 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 J3QLW9 94 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 CLPSP04118 112 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 IL5P05113 134 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 MGST1P10620 155 aaKnown RBP2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 NNATQ16517 81 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 KRTAP25-1Q3LHN0 102 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 Q8N814 137 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 LINC00301Q8NCQ3 95 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 VSTM2AQ8TAG5 236 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 SPTSSAQ969W0 71 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 Q96M85 177 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 SLC50A1Q9BRV3 221 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 C14orf132Q9NPU4 83 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 ZNF407Q9C0G0 2248 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 ADGRB1O14514 1584 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 PLXNB1O43157 2135 aa2.35□□□□□ -2.03
HMGB1P45-201ENST00000435986 SHANK1Q9Y566 2161 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 SNCGO76070 127 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 IGLV1-51P01701 117 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 CRPP02741 224 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 IGLC1P0CG04 106 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 ROMO1P60602 79 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 SPANXN5Q5MJ07 72 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 C6orf52Q5T4I8 152 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 LYPD6Q86Y78 171 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 SMIM7Q9BQ49 75 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 ATG5Q9H1Y0 275 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 TMEM106BQ9NUM4 274 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 TMEM242Q9NWH2 141 aa2.34□□□□□ -2.03
HMGB1P45-201ENST00000435986 CACNA1DQ01668 2161 aa2.34□□□□□ -2.04
HMGB1P45-201ENST00000435986 MYH9P35579 1960 aaKnown RBP2.34□□□□□ -2.04
HMGB1P45-201ENST00000435986 KIAA1551Q9HCM1 1747 aa2.34□□□□□ -2.04
HMGB1P45-201ENST00000435986 CEP162Q5TB80 1403 aa2.34□□□□□ -2.04
HMGB1P45-201ENST00000435986 ZSWIM8A7E2V4 1837 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 ABCC2Q92887 1545 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 GLI3P10071 1580 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 MYH6P13533 1939 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 SCN8AQ9UQD0 1980 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 BIVM-ERCC5R4GMW8 1640 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 IGHV3-64A0A075B6Q5 118 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 MUC21A0A0G2JKD1 596 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 LOC107984156A0A0G2JMH3 177 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 A0A1W2PNN7 141 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 NDUFB6O95139 128 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 PIPP12273 146 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 C1orf134Q5TEV5 83 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 C12orf73Q69YU5 71 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 ARL17AQ8IVW1 177 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 C10orf105Q8TEF2 133 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 CXCL16Q9H2A7 254 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 BET1LQ9NYM9 111 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 CITO14578 2027 aa2.33□□□□□ -2.04
HMGB1P45-201ENST00000435986 ANAPC1Q9H1A4 1944 aa2.32□□□□□ -2.04
HMGB1P45-201ENST00000435986 ERICH3Q5RHP9 1530 aa2.32□□□□□ -2.04
HMGB1P45-201ENST00000435986 TOP2BQ02880 1626 aa2.32□□□□□ -2.04
HMGB1P45-201ENST00000435986 MADDQ8WXG6 1647 aa2.32□□□□□ -2.04
HMGB1P45-201ENST00000435986 BCORL1Q5H9F3 1711 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms