RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 HIST1H2BNQ99877 126 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 HIST1H2BMQ99879 126 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 LINC00473A8K010 186 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 C9orf47Q6ZRZ4 202 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 BAALCQ8WXS3 180 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 KIR2DL5BQ8NHK3 375 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 U3KQE9 123 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 A0A1B0GW64 132 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 MORN5Q5VZ52 161 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 BOD1L2Q8IYS8 172 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 SHISA9B4DS77 424 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 COX7A2LO14548 114 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 GPHB5Q86YW7 130 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 ZNF493Q6ZR52 646 aa8.94□□□□□ -0.98
SCN4A-201ENST00000435607 IGKV1-16P04430 117 aa8.94□□□□□ -0.98
SCN4A-201ENST00000435607 FGF6P10767 208 aa8.94□□□□□ -0.98
SCN4A-201ENST00000435607 FOXE3Q13461 319 aa8.94□□□□□ -0.98
SCN4A-201ENST00000435607 VSIRQ9H7M9 311 aa8.94□□□□□ -0.98
SCN4A-201ENST00000435607 RNF183Q96D59 192 aa8.94□□□□□ -0.98
SCN4A-201ENST00000435607 SMAD5-AS1Q9Y6J3 95 aa8.94□□□□□ -0.98
SCN4A-201ENST00000435607 NCOR1P1Q9H4R4 102 aa8.94□□□□□ -0.98
SCN4A-201ENST00000435607 GYPEP15421 78 aa8.94□□□□□ -0.98
SCN4A-201ENST00000435607 RBM3P98179 157 aaKnown RBP8.94□□□□□ -0.98
SCN4A-201ENST00000435607 B9D2Q9BPU9 175 aa8.94□□□□□ -0.98
SCN4A-201ENST00000435607 HGFACQ04756 655 aa8.93□□□□□ -0.98
SCN4A-201ENST00000435607 ZNF833PQ6ZTB9 187 aa8.93□□□□□ -0.98
SCN4A-201ENST00000435607 WNK3Q9BYP7 1800 aa8.93□□□□□ -0.98
SCN4A-201ENST00000435607 FLVCR1-AS1Q8TAF5 88 aa8.93□□□□□ -0.98
SCN4A-201ENST00000435607 A0A1B0GX51 115 aa8.93□□□□□ -0.98
SCN4A-201ENST00000435607 DAZ2Q13117 558 aaKnown RBP8.93□□□□□ -0.98
SCN4A-201ENST00000435607 FAM104BQ5XKR9 115 aa8.93□□□□□ -0.98
SCN4A-201ENST00000435607 DAZ4Q86SG3 579 aaKnown RBP8.93□□□□□ -0.98
SCN4A-201ENST00000435607 C17orf82Q86X59 251 aaPredicted RBP8.93□□□□□ -0.98
SCN4A-201ENST00000435607 ATP6V0E2Q8NHE4 81 aa8.93□□□□□ -0.98
SCN4A-201ENST00000435607 DAZ3Q9NR90 486 aaKnown RBP8.93□□□□□ -0.98
SCN4A-201ENST00000435607 TICRRQ7Z2Z1 1910 aa8.93□□□□□ -0.98
SCN4A-201ENST00000435607 ANK1P16157 1881 aa8.93□□□□□ -0.98
SCN4A-201ENST00000435607 C15orf62A8K5M9 175 aa8.93□□□□□ -0.98
SCN4A-201ENST00000435607 Q6ZS49 121 aa8.93□□□□□ -0.98
SCN4A-201ENST00000435607 WFDC1Q9HC57 220 aa8.93□□□□□ -0.98
SCN4A-201ENST00000435607 IGKV1-27A0A075B6S5 117 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 PRSS33Q8NF86 280 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 NYNRINQ9P2P1 1898 aaKnown RBP8.92□□□□□ -0.98
SCN4A-201ENST00000435607 TRBV19A0A075B6N1 114 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 UBE2CO00762 179 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 C20orf78Q9BR46 151 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 DEFB112Q30KQ8 113 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 ADAMTSL5Q6ZMM2 481 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 LINC00311Q8N616 119 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 HIST1H2BLQ99880 126 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 C14orf132Q9NPU4 83 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 PRO1854Q9UHT4 67 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 TINCRA0A1B0GVN0 87 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 MRPL52Q86TS9 123 aaKnown RBP8.92□□□□□ -0.98
SCN4A-201ENST00000435607 NDUFA4L2Q9NRX3 87 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 WIPF2Q8TF74 440 aaPredicted RBP8.92□□□□□ -0.98
SCN4A-201ENST00000435607 SIGLEC8Q9NYZ4 499 aa8.92□□□□□ -0.98
SCN4A-201ENST00000435607 K7ERS5 55 aa8.91□□□□□ -0.98
SCN4A-201ENST00000435607 H0YIZ8 118 aa8.91□□□□□ -0.98
SCN4A-201ENST00000435607 K7EMI3 77 aa8.91□□□□□ -0.98
SCN4A-201ENST00000435607 NDUFA1O15239 70 aa8.91□□□□□ -0.98
SCN4A-201ENST00000435607 NAA38Q9BRA0 125 aaKnown RBP8.91□□□□□ -0.98
SCN4A-201ENST00000435607 TSC2P49815 1807 aa8.91□□□□□ -0.98
SCN4A-201ENST00000435607 TMEM14CQ9P0S9 112 aa8.91□□□□□ -0.98
SCN4A-201ENST00000435607 IGKV1D-8A0A087WSZ0 117 aa8.91□□□□□ -0.98
SCN4A-201ENST00000435607 F6UB75 175 aa8.91□□□□□ -0.98
SCN4A-201ENST00000435607 LYPD3O95274 346 aa8.91□□□□□ -0.98
SCN4A-201ENST00000435607 IL15RAQ13261 267 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 TEX36Q5VZQ5 186 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 WFDC9Q8NEX5 89 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 PPDPFLQ8WWR9 84 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 PROP1O75360 226 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 IGHV3-30P01768 117 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 IGHV3-33P01772 117 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 IGHV3-30-3P0DP02 117 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 IGHV3-30-5P0DP03 117 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 VSIG2Q96IQ7 327 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 C17orf77Q96MU5 243 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 LHFPL1Q86WI0 220 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 SHISA3A0PJX4 238 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 IGHV2-5P01817 119 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 IGHG2P01859 326 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 PRR25Q96S07 402 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 MESP1Q9BRJ9 268 aa8.9□□□□□ -0.98
SCN4A-201ENST00000435607 LTAP01374 205 aa8.9□□□□□ -0.99
SCN4A-201ENST00000435607 CASC2Q6XLA1 102 aa8.9□□□□□ -0.99
SCN4A-201ENST00000435607 HLA-DMBP28068 263 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 ANKRD29Q8N6D5 301 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 RSPO3Q9BXY4 272 aaPredicted RBP8.89□□□□□ -0.99
SCN4A-201ENST00000435607 GTSF1LQ9H1H1 148 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 SBF2Q86WG5 1849 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 IGHV4-4A0A075B6R2 117 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 H3BRN7 92 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 IGHV4-59P01825 116 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 TRAV4A0A0B4J268 109 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 C3orf79P0CE67 100 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 INSL3P51460 131 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 C5orf24Q7Z6I8 188 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 TMEM213A2RRL7 107 aa8.89□□□□□ -0.99
SCN4A-201ENST00000435607 B3GALT5-AS1P59052 145 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms