RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 H3BUX3 64 aa7.96□□□□□ -1.13
CD44-210ENST00000434472 NUDT3O95989 172 aa7.96□□□□□ -1.13
CD44-210ENST00000434472 IGHV4-38-2P0DP08 117 aa7.96□□□□□ -1.13
CD44-210ENST00000434472 GATA3P23771 443 aa7.96□□□□□ -1.13
CD44-210ENST00000434472 MPV17L2Q567V2 206 aa7.96□□□□□ -1.13
CD44-210ENST00000434472 BVES-AS1Q5T3Y7 98 aa7.96□□□□□ -1.13
CD44-210ENST00000434472 DEFB125Q8N687 156 aa7.96□□□□□ -1.13
CD44-210ENST00000434472 OR2K2Q8NGT1 345 aa7.96□□□□□ -1.13
CD44-210ENST00000434472 MCRIP2Q9BUT9 160 aaKnown RBP7.96□□□□□ -1.13
CD44-210ENST00000434472 C11orf21Q9P2W6 132 aa7.96□□□□□ -1.13
CD44-210ENST00000434472 LINC00527Q9UJ94 153 aa7.96□□□□□ -1.13
CD44-210ENST00000434472 ZNF580Q9UK33 172 aa7.96□□□□□ -1.13
CD44-210ENST00000434472 LAMA5O15230 3695 aa7.96□□□□□ -1.13
CD44-210ENST00000434472 TRAV21A0A0B4J279 112 aa7.96□□□□□ -1.14
CD44-210ENST00000434472 IGHV7-4-1A0A0J9YVY3 117 aa7.96□□□□□ -1.14
CD44-210ENST00000434472 MED14OSP0DP75 135 aa7.96□□□□□ -1.14
CD44-210ENST00000434472 LY6EQ16553 131 aa7.96□□□□□ -1.14
CD44-210ENST00000434472 SPANXN1Q5VSR9 72 aa7.96□□□□□ -1.14
CD44-210ENST00000434472 SAMD13Q5VXD3 122 aa7.96□□□□□ -1.14
CD44-210ENST00000434472 SMPXQ9UHP9 88 aa7.96□□□□□ -1.14
CD44-210ENST00000434472 HRNRQ86YZ3 2850 aaPredicted RBP7.95□□□□□ -1.14
CD44-210ENST00000434472 B4DSR2 109 aa7.95□□□□□ -1.14
CD44-210ENST00000434472 SIVA1O15304 175 aa7.95□□□□□ -1.14
CD44-210ENST00000434472 CD5LO43866 347 aa7.95□□□□□ -1.14
CD44-210ENST00000434472 ATP5LO75964 103 aa7.95□□□□□ -1.14
CD44-210ENST00000434472 PF4V1P10720 104 aa7.95□□□□□ -1.14
CD44-210ENST00000434472 LEPP41159 167 aa7.95□□□□□ -1.14
CD44-210ENST00000434472 UBE2V1Q13404 147 aa7.95□□□□□ -1.14
CD44-210ENST00000434472 OR4X2Q8NGF9 303 aa7.95□□□□□ -1.14
CD44-210ENST00000434472 OR9G4Q8NGQ1 327 aa7.95□□□□□ -1.14
CD44-210ENST00000434472 MRAP2Q96G30 205 aa7.95□□□□□ -1.14
CD44-210ENST00000434472 SPOCK3Q9BQ16 436 aa7.95□□□□□ -1.14
CD44-210ENST00000434472 IGHV4-30-2A0A087WSY4 118 aa7.94□□□□□ -1.14
CD44-210ENST00000434472 SOCS3O14543 225 aa7.94□□□□□ -1.14
CD44-210ENST00000434472 SMAD7O15105 426 aaKnown RBP7.94□□□□□ -1.14
CD44-210ENST00000434472 IGLV1-40P01703 118 aa7.94□□□□□ -1.14
CD44-210ENST00000434472 PTTG1IPP53801 180 aa7.94□□□□□ -1.14
CD44-210ENST00000434472 C20orf173Q96LM9 149 aa7.94□□□□□ -1.14
CD44-210ENST00000434472 ZZEF1O43149 2961 aa7.94□□□□□ -1.14
CD44-210ENST00000434472 ATRXP46100 2492 aa7.94□□□□□ -1.14
CD44-210ENST00000434472 HIVEP3Q5T1R4 2406 aa7.94□□□□□ -1.14
CD44-210ENST00000434472 COL6A6A6NMZ7 2263 aa7.93□□□□□ -1.14
CD44-210ENST00000434472 WNK2Q9Y3S1 2297 aa7.93□□□□□ -1.14
CD44-210ENST00000434472 K7EMT4 169 aa7.93□□□□□ -1.14
CD44-210ENST00000434472 SLC25A16P16260 332 aa7.93□□□□□ -1.14
CD44-210ENST00000434472 SEC11AP67812 179 aa7.93□□□□□ -1.14
CD44-210ENST00000434472 FOXE3Q13461 319 aa7.93□□□□□ -1.14
CD44-210ENST00000434472 ANKRD39Q53RE8 183 aa7.93□□□□□ -1.14
CD44-210ENST00000434472 UNQ9165/PRO28630Q6UXU0 137 aa7.93□□□□□ -1.14
CD44-210ENST00000434472 BOD1L2Q8IYS8 172 aa7.93□□□□□ -1.14
CD44-210ENST00000434472 SMG1Q96Q15 3661 aaKnown RBP7.93□□□□□ -1.14
CD44-210ENST00000434472 IGLV2-18A0A075B6J9 118 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 TMEM89A2RUT3 159 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 TRBV12-3P01733 135 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 EVI2AP22794 236 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 ID1P41134 155 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 ASIPP42127 132 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 LAGE3Q14657 143 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 TMEM97Q5BJF2 176 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 C2orf91Q6ZV80 131 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 GPHB5Q86YW7 130 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 UFC1Q9Y3C8 167 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 NBASA2RRP1 2371 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 A1L4Q6 167 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 TAX1BP3O14907 124 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 IGHV3-11P01762 117 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 PRSS1P07477 247 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 FGF6P10767 208 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 FXYD7P58549 80 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 APRG1Q8IVJ8 170 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 ZFAND2AQ8N6M9 145 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 NRACQ8N912 160 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 MYOZ3Q8TDC0 251 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 TMEM158Q8WZ71 300 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 FAM19A4Q96LR4 140 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 RHPN1-AS1Q9BWJ2 59 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 ZMAT4Q9H898 229 aa7.92□□□□□ -1.14
CD44-210ENST00000434472 DAZ1Q9NQZ3 744 aaKnown RBP7.92□□□□□ -1.14
CD44-210ENST00000434472 PEF1Q9UBV8 284 aaKnown RBP7.92□□□□□ -1.14
CD44-210ENST00000434472 LRBAP50851 2863 aa7.91□□□□□ -1.14
CD44-210ENST00000434472 H3BVH4 76 aa7.91□□□□□ -1.14
CD44-210ENST00000434472 J3QLI3 93 aa7.91□□□□□ -1.14
CD44-210ENST00000434472 K7EMI3 77 aa7.91□□□□□ -1.14
CD44-210ENST00000434472 S100A4P26447 101 aaKnown RBP7.91□□□□□ -1.14
CD44-210ENST00000434472 CFHR3Q02985 330 aa7.91□□□□□ -1.14
CD44-210ENST00000434472 SRSF1Q07955 248 aaKnown RBP eCLIP7.91□□□□□ -1.14
CD44-210ENST00000434472 HSD52Q0P140 79 aa7.91□□□□□ -1.14
CD44-210ENST00000434472 VAMP3Q15836 100 aa7.91□□□□□ -1.14
CD44-210ENST00000434472 PRR9Q5T870 116 aa7.91□□□□□ -1.14
CD44-210ENST00000434472 DPH3P1Q9H4G8 78 aa7.91□□□□□ -1.14
CD44-210ENST00000434472 SPTBN1Q01082 2364 aaKnown RBP7.9□□□□□ -1.14
CD44-210ENST00000434472 A6NDN8 102 aa7.9□□□□□ -1.14
CD44-210ENST00000434472 M0R381 172 aa7.9□□□□□ -1.14
CD44-210ENST00000434472 GAS8-AS1O95177 125 aa7.9□□□□□ -1.14
CD44-210ENST00000434472 PPP1R17O96001 155 aa7.9□□□□□ -1.14
CD44-210ENST00000434472 IGKCP01834 107 aa7.9□□□□□ -1.14
CD44-210ENST00000434472 GATA1P15976 413 aaPredicted RBP7.9□□□□□ -1.14
CD44-210ENST00000434472 RPL11P62913 178 aaKnown RBP7.9□□□□□ -1.14
CD44-210ENST00000434472 BLCAPP62952 87 aa7.9□□□□□ -1.14
CD44-210ENST00000434472 KIR3DS1Q14943 382 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms