RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 K7EMI3 77 aa12.1□□□□□ -0.47
SCARF1-203ENST00000434376 IFI27P40305 119 aaPredicted RBP12.1□□□□□ -0.47
SCARF1-203ENST00000434376 CACNG7P62955 275 aa12.1□□□□□ -0.47
SCARF1-203ENST00000434376 HIST2H2BCQ6DN03 193 aa12.1□□□□□ -0.47
SCARF1-203ENST00000434376 DTX2Q86UW9 622 aa12.1□□□□□ -0.47
SCARF1-203ENST00000434376 CHCHD1Q96BP2 118 aaKnown RBP12.1□□□□□ -0.47
SCARF1-203ENST00000434376 F8W735 103 aaPredicted RBP12.1□□□□□ -0.47
SCARF1-203ENST00000434376 H3BRN7 92 aa12.1□□□□□ -0.47
SCARF1-203ENST00000434376 CD5LO43866 347 aa12.1□□□□□ -0.47
SCARF1-203ENST00000434376 EGR2P11161 476 aaPredicted RBP12.1□□□□□ -0.47
SCARF1-203ENST00000434376 CRIP1P50238 77 aa12.1□□□□□ -0.47
SCARF1-203ENST00000434376 KLK15Q9H2R5 256 aa12.1□□□□□ -0.47
SCARF1-203ENST00000434376 LOXL1Q08397 574 aaPredicted RBP12.09□□□□□ -0.47
SCARF1-203ENST00000434376 TWIST1Q15672 202 aa12.09□□□□□ -0.47
SCARF1-203ENST00000434376 AMN1Q8IY45 258 aa12.09□□□□□ -0.47
SCARF1-203ENST00000434376 HIF1ANQ9NWT6 349 aa12.09□□□□□ -0.47
SCARF1-203ENST00000434376 MYCNOSP40205 109 aa12.09□□□□□ -0.47
SCARF1-203ENST00000434376 C10orf99Q6UWK7 81 aa12.09□□□□□ -0.47
SCARF1-203ENST00000434376 LYZL1Q6UWQ5 148 aa12.09□□□□□ -0.47
SCARF1-203ENST00000434376 CSTL1Q9H114 145 aa12.09□□□□□ -0.47
SCARF1-203ENST00000434376 A0A1B0GUT8 65 aa12.09□□□□□ -0.47
SCARF1-203ENST00000434376 INS-IGF2F8WCM5 200 aa12.09□□□□□ -0.47
SCARF1-203ENST00000434376 PET117Q6UWS5 81 aa12.09□□□□□ -0.47
SCARF1-203ENST00000434376 TMEM189A5PLL7 270 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 LTAP01374 205 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 EVI2AP22794 236 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 GTF2H5Q6ZYL4 71 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 F6UB75 175 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 ZNF80P51504 273 aaPredicted RBP12.08□□□□□ -0.48
SCARF1-203ENST00000434376 PVRIGQ6DKI7 326 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 OR10AG1Q8NH19 301 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 NDUFA3O95167 84 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 IGLV2-11P01706 119 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 GCSHP23434 173 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 UBE2E1P51965 193 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 S100A7AQ86SG5 101 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 FER1L6-AS1Q8NA97 138 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 UFC1Q9Y3C8 167 aa12.08□□□□□ -0.48
SCARF1-203ENST00000434376 EDN2P20800 178 aa12.07□□□□□ -0.48
SCARF1-203ENST00000434376 PSG3Q16557 428 aa12.07□□□□□ -0.48
SCARF1-203ENST00000434376 TTTY13Q9BZ97 58 aa12.07□□□□□ -0.48
SCARF1-203ENST00000434376 SH2D1AO60880 128 aa12.07□□□□□ -0.48
SCARF1-203ENST00000434376 PPBPP02775 128 aa12.07□□□□□ -0.48
SCARF1-203ENST00000434376 KIR3DS1Q14943 382 aa12.07□□□□□ -0.48
SCARF1-203ENST00000434376 PRORYQ9H606 182 aa12.07□□□□□ -0.48
SCARF1-203ENST00000434376 D6R8Y8 96 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 TGFAP01135 160 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 AVPP01185 164 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 RPL7P18124 248 aaKnown RBP12.06□□□□□ -0.48
SCARF1-203ENST00000434376 IL17RELQ6ZVW7 336 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 NPBQ8NG41 125 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 MLST8Q9BVC4 326 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 IGF1P05019 195 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 APCP25054 2843 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 A6NDN8 102 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 COX8AP10176 69 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 PLP1P60201 277 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 RIGQ13278 110 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 KHDC1LQ5JSQ8 128 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 UNQ9165/PRO28630Q6UXU0 137 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 C11orf44Q8N8P7 122 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 OR1N2Q8NGR9 330 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 PIMREGQ9BSJ6 248 aa12.06□□□□□ -0.48
SCARF1-203ENST00000434376 A0A0G2JLM5 398 aa12.05□□□□□ -0.48
SCARF1-203ENST00000434376 PCP2Q8IVA1 136 aa12.05□□□□□ -0.48
SCARF1-203ENST00000434376 OR2K2Q8NGT1 345 aa12.05□□□□□ -0.48
SCARF1-203ENST00000434376 JMJD8Q96S16 334 aa12.05□□□□□ -0.48
SCARF1-203ENST00000434376 SPCS1Q9Y6A9 102 aa12.05□□□□□ -0.48
SCARF1-203ENST00000434376 SMAD5-AS1Q9Y6J3 95 aa12.05□□□□□ -0.48
SCARF1-203ENST00000434376 TMEM238C9JI98 176 aa12.05□□□□□ -0.48
SCARF1-203ENST00000434376 GATA1P15976 413 aaPredicted RBP12.05□□□□□ -0.48
SCARF1-203ENST00000434376 C16orf92Q96LL3 132 aa12.05□□□□□ -0.48
SCARF1-203ENST00000434376 ZNF747Q9BV97 191 aa12.05□□□□□ -0.48
SCARF1-203ENST00000434376 GAS8-AS1O95177 125 aa12.04□□□□□ -0.48
SCARF1-203ENST00000434376 HTN1P15515 57 aa12.04□□□□□ -0.48
SCARF1-203ENST00000434376 FCER1GP30273 86 aa12.04□□□□□ -0.48
SCARF1-203ENST00000434376 C2orf91Q6ZV80 131 aa12.04□□□□□ -0.48
SCARF1-203ENST00000434376 MTURNQ8N3F0 131 aa12.04□□□□□ -0.48
SCARF1-203ENST00000434376 SMIM12Q96EX1 92 aa12.04□□□□□ -0.48
SCARF1-203ENST00000434376 CCDC140Q96MF4 163 aa12.04□□□□□ -0.48
SCARF1-203ENST00000434376 RNF5Q99942 180 aa12.04□□□□□ -0.48
SCARF1-203ENST00000434376 TRAV41A0A0B4J266 112 aa12.04□□□□□ -0.48
SCARF1-203ENST00000434376 ATP5G2Q06055 141 aa12.04□□□□□ -0.48
SCARF1-203ENST00000434376 MS4A6AQ9H2W1 248 aa12.03□□□□□ -0.48
SCARF1-203ENST00000434376 GCN1Q92616 2671 aaKnown RBP12.03□□□□□ -0.48
SCARF1-203ENST00000434376 CRXO43186 299 aaPredicted RBP12.03□□□□□ -0.48
SCARF1-203ENST00000434376 TTC9CQ8N5M4 171 aa12.03□□□□□ -0.48
SCARF1-203ENST00000434376 MINOS1Q5TGZ0 78 aa12.03□□□□□ -0.48
SCARF1-203ENST00000434376 PRELID3AQ96N28 172 aa12.03□□□□□ -0.48
SCARF1-203ENST00000434376 BBC3Q96PG8 261 aaPredicted RBP12.03□□□□□ -0.48
SCARF1-203ENST00000434376 NDFIP1Q9BT67 221 aa12.03□□□□□ -0.48
SCARF1-203ENST00000434376 KLF12Q9Y4X4 402 aa12.03□□□□□ -0.48
SCARF1-203ENST00000434376 MINOS1-NBL1R4GNA1 71 aa12.03□□□□□ -0.48
SCARF1-203ENST00000434376 C19orf71A6NCJ1 209 aa12.02□□□□□ -0.49
SCARF1-203ENST00000434376 K7ERJ3 54 aa12.02□□□□□ -0.49
SCARF1-203ENST00000434376 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
SCARF1-203ENST00000434376 ARL3P36405 182 aa12.02□□□□□ -0.49
SCARF1-203ENST00000434376 GTSF1LQ9H1H1 148 aa12.02□□□□□ -0.49
SCARF1-203ENST00000434376 NBPF19A0A087WUL8 3843 aa12.02□□□□□ -0.49
SCARF1-203ENST00000434376 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms