RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 Q8N1X5 172 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 LINC00482Q8N8I6 264 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 DPF1Q92782 380 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 URB1-AS1Q96HZ7 61 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 C17orf77Q96MU5 243 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 PIMREGQ9BSJ6 248 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 ST20Q9HBF5 79 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 MRPS16Q9Y3D3 137 aaKnown RBP5.74□□□□□ -1.49
COL17A1-204ENST00000433822 PAM16Q9Y3D7 125 aa5.74□□□□□ -1.49
COL17A1-204ENST00000433822 IGHV1-69DA0A0B4J2H0 117 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 TRBV7-9A0A0J9YWB2 115 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 OR2T8A6NH00 312 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 H3BTX0 84 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 M0R3E3 92 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 SH2D1AO60880 128 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 IGHV1-69P01742 117 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 IGHG4P01861 327 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 ARMS2P0C7Q2 107 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 NTF3P20783 257 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 GATA3P23771 443 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 CD24P25063 80 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 DSCR9P59020 149 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 RHOGP84095 191 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 SPATA45Q537H7 98 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 ANKRD39Q53RE8 183 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 KLF17Q5JT82 389 aaPredicted RBP5.73□□□□□ -1.49
COL17A1-204ENST00000433822 FAM104BQ5XKR9 115 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 EBLN2Q6P2I7 272 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 RNASEKQ6P5S7 137 aaKnown RBP5.73□□□□□ -1.49
COL17A1-204ENST00000433822 FAM19A2Q8N3H0 131 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 DEFB125Q8N687 156 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 USMG5Q96IX5 58 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 SGK494Q96LW2 274 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 CCDC140Q96MF4 163 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 ASCL2Q99929 193 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 TMEM191AQ9H0A3 160 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 MS4A6AQ9H2W1 248 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 SMAD5-AS1Q9Y6J3 95 aa5.73□□□□□ -1.49
COL17A1-204ENST00000433822 PRRC2AP48634 2157 aaKnown RBP5.73□□□□□ -1.49
COL17A1-204ENST00000433822 IGHV1-24A0A0C4DH33 117 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 A0A1B0GV90 55 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 CLPSL1A2RUU4 121 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 LINC01546A6NGU7 62 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 FABP5P3A8MUU1 101 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 SYS1-DBNDD2H3BUS1 97 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 NDUFS7O75251 213 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 LEPROTL1O95214 131 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 IGHV4-39P01824 125 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 SNRPCP09234 159 aaKnown RBP5.72□□□□□ -1.49
COL17A1-204ENST00000433822 HIST1H1AQ02539 215 aaPredicted RBP5.72□□□□□ -1.49
COL17A1-204ENST00000433822 GAGE1Q13065 139 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 SAMD13Q5VXD3 122 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 LCN12Q6JVE5 192 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 ZNF705AQ6ZN79 300 aaPredicted RBP5.72□□□□□ -1.49
COL17A1-204ENST00000433822 C10orf105Q8TEF2 133 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 METTL26Q96S19 204 aa5.72□□□□□ -1.49
COL17A1-204ENST00000433822 TLN2Q9Y4G6 2542 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 NDUFA4O00483 81 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 IGHG2P01859 326 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 CLEC3BP05452 202 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 GPR183P32249 361 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 ATP5G2Q06055 141 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 TDRG1Q3Y452 100 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 COL5A1-AS1Q5SY13 56 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 LINC01545Q5VT33 79 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 C9orf47Q6ZRZ4 202 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 C9orf139Q6ZV77 190 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 ORMDL3Q8N138 153 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 BCL6BQ8N143 479 aaPredicted RBP5.71□□□□□ -1.5
COL17A1-204ENST00000433822 FER1L6-AS1Q8NA97 138 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 OR10AG1Q8NH19 301 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 MAP1LC3CQ9BXW4 147 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 WNK2Q9Y3S1 2297 aa5.71□□□□□ -1.5
COL17A1-204ENST00000433822 IGHV4-4A0A075B6R2 117 aa5.7□□□□□ -1.5
COL17A1-204ENST00000433822 IGKV2-40A0A087WW87 121 aaPredicted RBP5.7□□□□□ -1.5
COL17A1-204ENST00000433822 TRAV41A0A0B4J266 112 aa5.7□□□□□ -1.5
COL17A1-204ENST00000433822 TMEM89A2RUT3 159 aa5.7□□□□□ -1.5
COL17A1-204ENST00000433822 OR4C46A6NHA9 309 aa5.7□□□□□ -1.5
COL17A1-204ENST00000433822 PRSS47A8MTI9 375 aa5.7□□□□□ -1.5
COL17A1-204ENST00000433822 IGKV2D-40P01614 121 aaPredicted RBP5.7□□□□□ -1.5
COL17A1-204ENST00000433822 HNRNPA3P51991 378 aaKnown RBP5.7□□□□□ -1.5
COL17A1-204ENST00000433822 ECSCRQ19T08 205 aa5.7□□□□□ -1.5
COL17A1-204ENST00000433822 CLEC2AQ6UVW9 174 aa5.7□□□□□ -1.5
COL17A1-204ENST00000433822 LYZL1Q6UWQ5 148 aa5.7□□□□□ -1.5
COL17A1-204ENST00000433822 FA2HQ7L5A8 372 aa5.7□□□□□ -1.5
COL17A1-204ENST00000433822 PIFOQ8TCI5 191 aa5.7□□□□□ -1.5
COL17A1-204ENST00000433822 GLMPQ8WWB7 406 aa5.7□□□□□ -1.5
COL17A1-204ENST00000433822 PMCHL2Q9BQD1 86 aa5.7□□□□□ -1.5
COL17A1-204ENST00000433822 MXRA5Q9NR99 2828 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 A6NDX4 124 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 C19orf84I3L1E1 186 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 TCAPO15273 167 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 SNAI2O43623 268 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 SLC25A16P16260 332 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 PPIFP30405 207 aaKnown RBP5.69□□□□□ -1.5
COL17A1-204ENST00000433822 TSPOP30536 169 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 ZNF138P52744 262 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 KRTAP10-9P60411 292 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 LGALS9BQ3B8N2 356 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms