RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
CNOT9-205ENST00000433439 HTN1P15515 57 aa11.16□□□□□ -0.62
CNOT9-205ENST00000433439 RPL35P42766 123 aaKnown RBP11.16□□□□□ -0.62
CNOT9-205ENST00000433439 RBMY1FQ15415 496 aaKnown RBP11.16□□□□□ -0.62
CNOT9-205ENST00000433439 SAPCD1Q5SSQ6 148 aa11.16□□□□□ -0.62
CNOT9-205ENST00000433439 C1orf158Q8N1D5 194 aa11.16□□□□□ -0.62
CNOT9-205ENST00000433439 NHLRC2Q8NBF2 726 aa11.16□□□□□ -0.62
CNOT9-205ENST00000433439 LINC01587Q99440 93 aa11.16□□□□□ -0.62
CNOT9-205ENST00000433439 NIPSNAP3BQ9BS92 247 aa11.16□□□□□ -0.62
CNOT9-205ENST00000433439 LENEPQ9Y5L5 61 aa11.16□□□□□ -0.62
CNOT9-205ENST00000433439 S100A9P06702 114 aaKnown RBP11.15□□□□□ -0.62
CNOT9-205ENST00000433439 SRSF3P84103 164 aaKnown RBP11.15□□□□□ -0.62
CNOT9-205ENST00000433439 PEA15Q15121 130 aa11.15□□□□□ -0.62
CNOT9-205ENST00000433439 Q6ZQT7 251 aa11.15□□□□□ -0.62
CNOT9-205ENST00000433439 BAGE2Q86Y30 109 aa11.15□□□□□ -0.62
CNOT9-205ENST00000433439 KLF12Q9Y4X4 402 aa11.15□□□□□ -0.62
CNOT9-205ENST00000433439 TRBV7-9A0A0J9YWB2 115 aa11.14□□□□□ -0.63
CNOT9-205ENST00000433439 RGS13O14921 159 aa11.14□□□□□ -0.63
CNOT9-205ENST00000433439 GCGP01275 180 aa11.14□□□□□ -0.63
CNOT9-205ENST00000433439 SRP19P09132 144 aaKnown RBP11.14□□□□□ -0.63
CNOT9-205ENST00000433439 SMUG1Q53HV7 270 aa11.14□□□□□ -0.63
CNOT9-205ENST00000433439 NAGKQ9UJ70 344 aa11.14□□□□□ -0.63
CNOT9-205ENST00000433439 TP53TG1Q9Y2A0 90 aa11.14□□□□□ -0.63
CNOT9-205ENST00000433439 ZFP30Q9Y2G7 519 aa11.14□□□□□ -0.63
CNOT9-205ENST00000433439 ZNF705GA8MUZ8 300 aaPredicted RBP11.13□□□□□ -0.63
CNOT9-205ENST00000433439 TMEM250H0YL14 139 aa11.13□□□□□ -0.63
CNOT9-205ENST00000433439 LTAP01374 205 aa11.13□□□□□ -0.63
CNOT9-205ENST00000433439 PRM2P04554 102 aa11.13□□□□□ -0.63
CNOT9-205ENST00000433439 NHLRC4P0CG21 123 aaPredicted RBP11.13□□□□□ -0.63
CNOT9-205ENST00000433439 TAS2R60P59551 318 aa11.13□□□□□ -0.63
CNOT9-205ENST00000433439 CENPWQ5EE01 88 aa11.13□□□□□ -0.63
CNOT9-205ENST00000433439 MUC21Q5SSG8 566 aa11.13□□□□□ -0.63
CNOT9-205ENST00000433439 PARLQ9H300 379 aa11.13□□□□□ -0.63
CNOT9-205ENST00000433439 TRBV6-1A0A0K0K1D8 114 aa11.12□□□□□ -0.63
CNOT9-205ENST00000433439 C9JQL5 133 aa11.12□□□□□ -0.63
CNOT9-205ENST00000433439 DEFB4AO15263 64 aa11.12□□□□□ -0.63
CNOT9-205ENST00000433439 MGST1P10620 155 aaKnown RBP11.12□□□□□ -0.63
CNOT9-205ENST00000433439 GNG4P50150 75 aa11.12□□□□□ -0.63
CNOT9-205ENST00000433439 ZNF80P51504 273 aaPredicted RBP11.12□□□□□ -0.63
CNOT9-205ENST00000433439 ZNF705AQ6ZN79 300 aaPredicted RBP11.12□□□□□ -0.63
CNOT9-205ENST00000433439 ZC2HC1AQ96GY0 325 aa11.12□□□□□ -0.63
CNOT9-205ENST00000433439 C20orf144Q9BQM9 153 aa11.12□□□□□ -0.63
CNOT9-205ENST00000433439 X6R8D5 127 aa11.12□□□□□ -0.63
CNOT9-205ENST00000433439 PGPEP1LA6NFU8 196 aa11.11□□□□□ -0.63
CNOT9-205ENST00000433439 H7BYZ3 331 aa11.11□□□□□ -0.63
CNOT9-205ENST00000433439 RRN3P1Q2M238 152 aa11.11□□□□□ -0.63
CNOT9-205ENST00000433439 PRR27Q6MZM9 219 aa11.11□□□□□ -0.63
CNOT9-205ENST00000433439 TMEM183AQ8IXX5 376 aa11.11□□□□□ -0.63
CNOT9-205ENST00000433439 TMEM256Q8N2U0 113 aa11.11□□□□□ -0.63
CNOT9-205ENST00000433439 PRKDCP78527 4128 aaKnown RBP11.11□□□□□ -0.63
CNOT9-205ENST00000433439 TRAV21A0A0B4J279 112 aa11.1□□□□□ -0.63
CNOT9-205ENST00000433439 ZNF324O75467 553 aaPredicted RBP11.1□□□□□ -0.63
CNOT9-205ENST00000433439 EMP1P54849 157 aa11.1□□□□□ -0.63
CNOT9-205ENST00000433439 Q6AWC8 147 aa11.1□□□□□ -0.63
CNOT9-205ENST00000433439 COMMD7Q86VX2 200 aa11.1□□□□□ -0.63
CNOT9-205ENST00000433439 SMIM7Q9BQ49 75 aa11.1□□□□□ -0.63
CNOT9-205ENST00000433439 U3KQK5 164 aa11.1□□□□□ -0.63
CNOT9-205ENST00000433439 IGHV4-28A0A0C4DH34 117 aa11.09□□□□□ -0.63
CNOT9-205ENST00000433439 CBY3A6NI87 242 aa11.09□□□□□ -0.63
CNOT9-205ENST00000433439 ZNF727A8MUV8 499 aa11.09□□□□□ -0.63
CNOT9-205ENST00000433439 AZU1P20160 251 aa11.09□□□□□ -0.63
CNOT9-205ENST00000433439 FAM159AQ6UWV7 190 aa11.09□□□□□ -0.63
CNOT9-205ENST00000433439 PYGO2Q9BRQ0 406 aa11.09□□□□□ -0.63
CNOT9-205ENST00000433439 TRBV20OR9-2A0A075B6H5 130 aa11.08□□□□□ -0.64
CNOT9-205ENST00000433439 IGHV1OR15-1A0A075B7D0 117 aa11.08□□□□□ -0.64
CNOT9-205ENST00000433439 FABP5P3A8MUU1 101 aa11.08□□□□□ -0.64
CNOT9-205ENST00000433439 SH2D1AO60880 128 aa11.08□□□□□ -0.64
CNOT9-205ENST00000433439 PFN1P07737 140 aaKnown RBP11.08□□□□□ -0.64
CNOT9-205ENST00000433439 MIFP14174 115 aa11.08□□□□□ -0.64
CNOT9-205ENST00000433439 ANXA2RQ3ZCQ2 193 aa11.08□□□□□ -0.64
CNOT9-205ENST00000433439 RYR3Q15413 4870 aa11.07□□□□□ -0.64
CNOT9-205ENST00000433439 A0A0J9YWU9 116 aa11.07□□□□□ -0.64
CNOT9-205ENST00000433439 SMIM9A6NGZ8 99 aa11.07□□□□□ -0.64
CNOT9-205ENST00000433439 M0R036 132 aa11.07□□□□□ -0.64
CNOT9-205ENST00000433439 NDUFS6O75380 124 aaKnown RBP11.07□□□□□ -0.64
CNOT9-205ENST00000433439 ORM1P02763 201 aa11.07□□□□□ -0.64
CNOT9-205ENST00000433439 CRIP1P50238 77 aa11.07□□□□□ -0.64
CNOT9-205ENST00000433439 FAM162BQ5T6X4 162 aa11.07□□□□□ -0.64
CNOT9-205ENST00000433439 EIF4E3Q8N5X7 224 aaKnown RBP11.07□□□□□ -0.64
CNOT9-205ENST00000433439 Q8NAQ8 132 aa11.07□□□□□ -0.64
CNOT9-205ENST00000433439 NEU1Q99519 415 aa11.07□□□□□ -0.64
CNOT9-205ENST00000433439 MLST8Q9BVC4 326 aa11.07□□□□□ -0.64
CNOT9-205ENST00000433439 SMDT1Q9H4I9 107 aa11.07□□□□□ -0.64
CNOT9-205ENST00000433439 TP53TG3Q9ULZ0 132 aa11.07□□□□□ -0.64
CNOT9-205ENST00000433439 KMT2CQ8NEZ4 4911 aaKnown RBP11.07□□□□□ -0.64
CNOT9-205ENST00000433439 IGLV2-8P01709 118 aa11.06□□□□□ -0.64
CNOT9-205ENST00000433439 OR5I1Q13606 314 aa11.06□□□□□ -0.64
CNOT9-205ENST00000433439 SOHLH1Q5JUK2 328 aa11.06□□□□□ -0.64
CNOT9-205ENST00000433439 OCC1Q8TAD7 63 aa11.06□□□□□ -0.64
CNOT9-205ENST00000433439 C11orf21Q9P2W6 132 aa11.06□□□□□ -0.64
CNOT9-205ENST00000433439 TMSB15BA0A087X1C1 80 aa11.05□□□□□ -0.64
CNOT9-205ENST00000433439 C9JCJ5 164 aa11.05□□□□□ -0.64
CNOT9-205ENST00000433439 GNRH2O43555 120 aa11.05□□□□□ -0.64
CNOT9-205ENST00000433439 SFTA3P0C7M3 94 aa11.05□□□□□ -0.64
CNOT9-205ENST00000433439 COX8CQ7Z4L0 72 aa11.05□□□□□ -0.64
CNOT9-205ENST00000433439 DAZAP1Q96EP5 407 aaKnown RBP11.05□□□□□ -0.64
CNOT9-205ENST00000433439 SDF2L1Q9HCN8 221 aa11.05□□□□□ -0.64
CNOT9-205ENST00000433439 LINC00862A6NCI5 91 aa11.04□□□□□ -0.64
CNOT9-205ENST00000433439 TMEM263Q8WUH6 116 aaKnown RBP11.04□□□□□ -0.64
CNOT9-205ENST00000433439 C16orf74Q96GX8 76 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms