RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 FAM19A4Q96LR4 140 aa9.59□□□□□ -0.87
LINC00840-201ENST00000431737 UBE2E2Q96LR5 201 aa9.59□□□□□ -0.87
LINC00840-201ENST00000431737 RNF114Q9Y508 228 aa9.59□□□□□ -0.87
LINC00840-201ENST00000431737 LGALS9O00182 355 aa9.58□□□□□ -0.88
LINC00840-201ENST00000431737 HSBP1O75506 76 aa9.58□□□□□ -0.88
LINC00840-201ENST00000431737 RPLP1P05386 114 aaKnown RBP9.58□□□□□ -0.88
LINC00840-201ENST00000431737 APRG1Q8IVJ8 170 aa9.58□□□□□ -0.88
LINC00840-201ENST00000431737 ZNF664Q8N3J9 261 aa9.58□□□□□ -0.88
LINC00840-201ENST00000431737 Q8N976 141 aa9.58□□□□□ -0.88
LINC00840-201ENST00000431737 FLNAP21333 2647 aaKnown RBP9.58□□□□□ -0.88
LINC00840-201ENST00000431737 TMEM213A2RRL7 107 aa9.57□□□□□ -0.88
LINC00840-201ENST00000431737 ORM1P02763 201 aa9.57□□□□□ -0.88
LINC00840-201ENST00000431737 CTAG1AP78358 180 aa9.57□□□□□ -0.88
LINC00840-201ENST00000431737 FAM104BQ5XKR9 115 aa9.57□□□□□ -0.88
LINC00840-201ENST00000431737 WFDC11Q8NEX6 87 aa9.57□□□□□ -0.88
LINC00840-201ENST00000431737 TPPP3Q9BW30 176 aa9.57□□□□□ -0.88
LINC00840-201ENST00000431737 PDZD2O15018 2839 aa9.57□□□□□ -0.88
LINC00840-201ENST00000431737 KIR2DL5BA0A0G2JN68 375 aa9.57□□□□□ -0.88
LINC00840-201ENST00000431737 KIR2DL5BA0A0G2JPC4 375 aa9.57□□□□□ -0.88
LINC00840-201ENST00000431737 RNASEKQ6P5S7 137 aaKnown RBP9.57□□□□□ -0.88
LINC00840-201ENST00000431737 KIR2DL5AQ8N109 375 aa9.57□□□□□ -0.88
LINC00840-201ENST00000431737 OR10J6PQ8NGY7 276 aa9.57□□□□□ -0.88
LINC00840-201ENST00000431737 C11orf21Q9P2W6 132 aa9.57□□□□□ -0.88
LINC00840-201ENST00000431737 MYO9AB2RTY4 2548 aa9.56□□□□□ -0.88
LINC00840-201ENST00000431737 IGKV3D-20A0A0C4DH25 116 aa9.56□□□□□ -0.88
LINC00840-201ENST00000431737 RAB4AP20338 218 aa9.56□□□□□ -0.88
LINC00840-201ENST00000431737 FAM19A2Q8N3H0 131 aa9.56□□□□□ -0.88
LINC00840-201ENST00000431737 ZFAND2AQ8N6M9 145 aa9.56□□□□□ -0.88
LINC00840-201ENST00000431737 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
LINC00840-201ENST00000431737 TMEM191AQ9H0A3 160 aa9.56□□□□□ -0.88
LINC00840-201ENST00000431737 CD33P20138 364 aa9.55□□□□□ -0.88
LINC00840-201ENST00000431737 DDTP30046 118 aa9.55□□□□□ -0.88
LINC00840-201ENST00000431737 PRR31Q5SQ13 230 aa9.55□□□□□ -0.88
LINC00840-201ENST00000431737 OR8A1Q8NGG7 326 aa9.55□□□□□ -0.88
LINC00840-201ENST00000431737 TLN2Q9Y4G6 2542 aa9.55□□□□□ -0.88
LINC00840-201ENST00000431737 NBPF19A0A087WUL8 3843 aa9.55□□□□□ -0.88
LINC00840-201ENST00000431737 FAM181BA6NEQ2 426 aa9.55□□□□□ -0.88
LINC00840-201ENST00000431737 M0R2Z0 102 aa9.55□□□□□ -0.88
LINC00840-201ENST00000431737 LINC00614P0C842 121 aa9.55□□□□□ -0.88
LINC00840-201ENST00000431737 C3orf79P0CE67 100 aa9.55□□□□□ -0.88
LINC00840-201ENST00000431737 PRR9Q5T870 116 aa9.55□□□□□ -0.88
LINC00840-201ENST00000431737 UNC79Q9P2D8 2635 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 IGHV4-4A0A075B6R2 117 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 SNAI2O43623 268 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 OR5AL1P0C617 328 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 NTF3P20783 257 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 ID1P41134 155 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 KRTDAPP60985 99 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 FOXC2Q99958 501 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 PRO1933Q9H354 126 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 CCDC168Q8NDH2 2452 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 IGHV4OR15-8A0A075B7B6 117 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 A0A087WW49 117 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 IGHV1-24A0A0C4DH33 117 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 ZNF705DP0CH99 300 aaPredicted RBP9.54□□□□□ -0.88
LINC00840-201ENST00000431737 ZNF705BP0CI00 300 aaPredicted RBP9.54□□□□□ -0.88
LINC00840-201ENST00000431737 EDN2P20800 178 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 KRTAP1-1Q07627 177 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 MRPL51Q4U2R6 128 aaKnown RBP9.54□□□□□ -0.88
LINC00840-201ENST00000431737 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
LINC00840-201ENST00000431737 C2orf70A6NJV1 201 aa9.53□□□□□ -0.88
LINC00840-201ENST00000431737 RPL11P62913 178 aaKnown RBP9.53□□□□□ -0.88
LINC00840-201ENST00000431737 TWIST1Q15672 202 aa9.53□□□□□ -0.88
LINC00840-201ENST00000431737 AMN1Q8IY45 258 aa9.53□□□□□ -0.88
LINC00840-201ENST00000431737 ORMDL3Q8N138 153 aa9.53□□□□□ -0.88
LINC00840-201ENST00000431737 TRAV21A0A0B4J279 112 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 M0QZ24 198 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 MED14OSP0DP75 135 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 HOXD3P31249 432 aaPredicted RBP9.52□□□□□ -0.89
LINC00840-201ENST00000431737 ODF3Q96PU9 254 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 D6R8Y8 96 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 CRXO43186 299 aaPredicted RBP9.52□□□□□ -0.89
LINC00840-201ENST00000431737 PPBPP02775 128 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 CACNG7P62955 275 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 HIST2H2BCQ6DN03 193 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 EBLN2Q6P2I7 272 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 RNF185Q96GF1 192 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 PRELID3AQ96N28 172 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 MS4A6AQ9H2W1 248 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 LAMTOR2Q9Y2Q5 125 aa9.52□□□□□ -0.89
LINC00840-201ENST00000431737 ZNF469Q96JG9 3925 aaPredicted RBP9.51□□□□□ -0.89
LINC00840-201ENST00000431737 KLLNB2CW77 178 aa9.51□□□□□ -0.89
LINC00840-201ENST00000431737 K7EQG2 157 aa9.51□□□□□ -0.89
LINC00840-201ENST00000431737 CD5LO43866 347 aa9.51□□□□□ -0.89
LINC00840-201ENST00000431737 KLHDC1Q8N7A1 406 aa9.51□□□□□ -0.89
LINC00840-201ENST00000431737 NDUFAF3Q9BU61 184 aa9.51□□□□□ -0.89
LINC00840-201ENST00000431737 ITPR2Q14571 2701 aa9.51□□□□□ -0.89
LINC00840-201ENST00000431737 BTF3P20290 206 aaKnown RBP9.5□□□□□ -0.89
LINC00840-201ENST00000431737 SYNJ2BPP57105 145 aa9.5□□□□□ -0.89
LINC00840-201ENST00000431737 DEFA6Q01524 100 aa9.5□□□□□ -0.89
LINC00840-201ENST00000431737 WFDC12Q8WWY7 111 aa9.5□□□□□ -0.89
LINC00840-201ENST00000431737 AP5S1Q9NUS5 200 aa9.5□□□□□ -0.89
LINC00840-201ENST00000431737 MSRB1Q9NZV6 116 aa9.5□□□□□ -0.89
LINC00840-201ENST00000431737 MUC21A0A0G2JKD1 596 aa9.5□□□□□ -0.89
LINC00840-201ENST00000431737 MUC21A0A140T8X8 626 aa9.5□□□□□ -0.89
LINC00840-201ENST00000431737 DNAJC9-AS1A6NH13 148 aa9.5□□□□□ -0.89
LINC00840-201ENST00000431737 MUC21Q5SSG8 566 aa9.5□□□□□ -0.89
LINC00840-201ENST00000431737 C4orf3Q8WVX3 66 aa9.5□□□□□ -0.89
LINC00840-201ENST00000431737 VAMP8Q9BV40 100 aa9.5□□□□□ -0.89
LINC00840-201ENST00000431737 LINC01546A6NGU7 62 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms