RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 ZNRF2Q8NHG8 242 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 ZFAND1Q8TCF1 268 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 ACY3Q96HD9 319 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 PBDC1Q9BVG4 233 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 FXYD6Q9H0Q3 95 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 SAV1Q9H4B6 383 aaPredicted RBP2.31□□□□□ -2.04
PTPN4-204ENST00000431283 Q9H521 79 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 RPRMQ9NS64 109 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 DOK5Q9P104 306 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 ANAPC10Q9UM13 185 aa2.31□□□□□ -2.04
PTPN4-204ENST00000431283 DMBT1Q9UGM3 2413 aaPredicted RBP2.31□□□□□ -2.04
PTPN4-204ENST00000431283 SRRM2Q9UQ35 2752 aaKnown RBP2.31□□□□□ -2.04
PTPN4-204ENST00000431283 UBR4Q5T4S7 5183 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 SNRPGP15A8MWD9 76 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 IFNA5P01569 189 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 IGKV1-5P01602 117 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 INAFM2P0DMQ5 153 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 TSPOP30536 169 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 GALR1P47211 349 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 RORCP51449 518 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 ATP5IP56385 69 aaPredicted RBP2.3□□□□□ -2.04
PTPN4-204ENST00000431283 SUPT4H1P63272 117 aaKnown RBP2.3□□□□□ -2.04
PTPN4-204ENST00000431283 USF2Q15853 346 aaPredicted RBP2.3□□□□□ -2.04
PTPN4-204ENST00000431283 BSXQ3C1V8 233 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 RNASE10Q5GAN6 216 aaKnown RBP2.3□□□□□ -2.04
PTPN4-204ENST00000431283 FAM78BQ5VT40 261 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 IZUMO2Q6UXV1 221 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 SSX7Q7RTT5 188 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 SNX29P2Q8IUI4 249 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 CYB561D1Q8N8Q1 229 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 ZNF709Q8N972 641 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 OR10J6PQ8NGY7 276 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 IGF2BP2-AS1Q96M15 143 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 TP53RKQ96S44 253 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 LINC01587Q99440 93 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 SLC35B3Q9H1N7 401 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 MRPL36Q9P0J6 103 aaKnown RBP2.3□□□□□ -2.04
PTPN4-204ENST00000431283 U3KQ87 197 aa2.3□□□□□ -2.04
PTPN4-204ENST00000431283 PIGBOS1A0A0B4J2F0 54 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 A0A0J9YX75 114 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 A0A0U1RRA0 63 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 ZNF705GA8MUZ8 300 aaPredicted RBP2.29□□□□□ -2.04
PTPN4-204ENST00000431283 FAM25AB3EWG3 89 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 FAM25CB3EWG5 89 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 FAM25GB3EWG6 89 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 CDS2O95674 445 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 CFDP00746 253 aaPredicted RBP2.29□□□□□ -2.04
PTPN4-204ENST00000431283 APOA1P02647 267 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 HTN1P15515 57 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 M6PRP20645 277 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 GPX4P36969 197 aaPredicted RBP2.29□□□□□ -2.04
PTPN4-204ENST00000431283 TAS2R60P59551 318 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 RHOBP62745 196 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 OR5I1Q13606 314 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 GAMTQ14353 236 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 NEDD8Q15843 81 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 SP6Q3SY56 376 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 SCGB2B2Q4G0G5 96 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 GDF5OSQ5U4N7 250 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 Q5W150 140 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 ZNF493Q6ZR52 646 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 TMEM144Q7Z5S9 345 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 S100A7AQ86SG5 101 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 KRTAP13-1Q8IUC0 172 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 LGI3Q8N145 548 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 C1orf158Q8N1D5 194 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 TMEM256Q8N2U0 113 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 TERB2Q8NHR7 220 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 GPX8Q8TED1 209 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 C15orf40Q8WUR7 153 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 FRZBQ92765 325 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 RBPMSQ93062 196 aaKnown RBP2.29□□□□□ -2.04
PTPN4-204ENST00000431283 GNPNAT1Q96EK6 184 aaPredicted RBP2.29□□□□□ -2.04
PTPN4-204ENST00000431283 GPR82Q96P67 336 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 RSG1Q9BU20 258 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 TMEM222Q9H0R3 208 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 VCX3AQ9NNX9 186 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 COMMD3Q9UBI1 195 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 C14orf166Q9Y224 244 aaKnown RBP2.29□□□□□ -2.04
PTPN4-204ENST00000431283 KCNIP3Q9Y2W7 256 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 LINC00588Q9Y4M8 146 aa2.29□□□□□ -2.04
PTPN4-204ENST00000431283 TIMM8BQ9Y5J9 83 aaPredicted RBP2.29□□□□□ -2.04
PTPN4-204ENST00000431283 TRAV26-1A0A087WT03 109 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 F6UB75 175 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 M0R2Z0 102 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 RLN2P04090 185 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 CD3DP04234 171 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 OR5AC1P0C628 307 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 SULT1A3P0DMM9 295 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 SULT1A4P0DMN0 295 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 AKR1C4P17516 323 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 TAS2R19P59542 299 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 DEFB1P60022 68 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 LSM3P62310 102 aaKnown RBP2.28□□□□□ -2.04
PTPN4-204ENST00000431283 RAB11AP62491 216 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 ZNF90Q03938 601 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 FGL1Q08830 312 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 OR2F1Q13607 317 aa2.28□□□□□ -2.04
PTPN4-204ENST00000431283 SURF2Q15527 256 aaPredicted RBP2.28□□□□□ -2.04
PTPN4-204ENST00000431283 SPINK13Q1W4C9 94 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms