RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 PEX7O00628 323 aa12.1□□□□□ -0.47
UBE3D-204ENST00000430071 INSP01308 110 aa12.1□□□□□ -0.47
UBE3D-204ENST00000430071 CRISP2P16562 243 aa12.1□□□□□ -0.47
UBE3D-204ENST00000430071 EMP1P54849 157 aa12.1□□□□□ -0.47
UBE3D-204ENST00000430071 BLOC1S1P78537 153 aa12.1□□□□□ -0.47
UBE3D-204ENST00000430071 PRR9Q5T870 116 aa12.1□□□□□ -0.47
UBE3D-204ENST00000430071 ZFAND2AQ8N6M9 145 aa12.1□□□□□ -0.47
UBE3D-204ENST00000430071 CYB561D1Q8N8Q1 229 aa12.1□□□□□ -0.47
UBE3D-204ENST00000430071 SGK494Q96LW2 274 aa12.1□□□□□ -0.47
UBE3D-204ENST00000430071 LINC00479Q96M42 142 aa12.1□□□□□ -0.47
UBE3D-204ENST00000430071 SERTM2A0A1B0GWG4 89 aa12.09□□□□□ -0.47
UBE3D-204ENST00000430071 IGLV2-11P01706 119 aa12.09□□□□□ -0.47
UBE3D-204ENST00000430071 LYPD6BQ8NI32 183 aa12.09□□□□□ -0.47
UBE3D-204ENST00000430071 TVP23CQ96ET8 276 aa12.09□□□□□ -0.47
UBE3D-204ENST00000430071 NEU1Q99519 415 aa12.09□□□□□ -0.47
UBE3D-204ENST00000430071 MANBALQ9NQG1 85 aa12.09□□□□□ -0.47
UBE3D-204ENST00000430071 NACAE9PAV3 2078 aa12.09□□□□□ -0.47
UBE3D-204ENST00000430071 IGHV4-4A0A075B6R2 117 aa12.08□□□□□ -0.48
UBE3D-204ENST00000430071 TRAV10A0A0B4J240 114 aa12.08□□□□□ -0.48
UBE3D-204ENST00000430071 TRAV34A0A0B4J273 112 aa12.08□□□□□ -0.48
UBE3D-204ENST00000430071 KLLNB2CW77 178 aa12.08□□□□□ -0.48
UBE3D-204ENST00000430071 C11orf94C9JXX5 98 aa12.08□□□□□ -0.48
UBE3D-204ENST00000430071 BTN1A1Q13410 526 aa12.08□□□□□ -0.48
UBE3D-204ENST00000430071 HIST1H2BAQ96A08 127 aa12.08□□□□□ -0.48
UBE3D-204ENST00000430071 GOLT1BQ9Y3E0 138 aa12.08□□□□□ -0.48
UBE3D-204ENST00000430071 TRBV7-9A0A0J9YWB2 115 aa12.07□□□□□ -0.48
UBE3D-204ENST00000430071 NMBP08949 121 aa12.07□□□□□ -0.48
UBE3D-204ENST00000430071 PCNPQ8WW12 178 aaKnown RBP12.07□□□□□ -0.48
UBE3D-204ENST00000430071 TCEAL7Q9BRU2 100 aa12.07□□□□□ -0.48
UBE3D-204ENST00000430071 PSG8Q9UQ74 426 aa12.07□□□□□ -0.48
UBE3D-204ENST00000430071 LENEPQ9Y5L5 61 aa12.07□□□□□ -0.48
UBE3D-204ENST00000430071 DEFB131BA0A096LNP1 70 aa12.06□□□□□ -0.48
UBE3D-204ENST00000430071 TRAV12-3A0A0B4J271 114 aa12.06□□□□□ -0.48
UBE3D-204ENST00000430071 SCO2A0A1W2PP80 73 aa12.06□□□□□ -0.48
UBE3D-204ENST00000430071 C7orf71A4D174 169 aa12.06□□□□□ -0.48
UBE3D-204ENST00000430071 K7EQM0 130 aa12.06□□□□□ -0.48
UBE3D-204ENST00000430071 GPX1P07203 203 aa12.06□□□□□ -0.48
UBE3D-204ENST00000430071 RNASE4P34096 147 aaKnown RBP12.06□□□□□ -0.48
UBE3D-204ENST00000430071 FLI1Q01543 452 aaPredicted RBP12.06□□□□□ -0.48
UBE3D-204ENST00000430071 Q6ZQT7 251 aa12.06□□□□□ -0.48
UBE3D-204ENST00000430071 TMEM75Q8N9X5 138 aa12.06□□□□□ -0.48
UBE3D-204ENST00000430071 IFNA1P01562 189 aa12.05□□□□□ -0.48
UBE3D-204ENST00000430071 BCL2P10415 239 aa12.05□□□□□ -0.48
UBE3D-204ENST00000430071 PRNTQ86SH4 94 aa12.05□□□□□ -0.48
UBE3D-204ENST00000430071 TMEM208Q9BTX3 173 aa12.05□□□□□ -0.48
UBE3D-204ENST00000430071 KLF12Q9Y4X4 402 aa12.05□□□□□ -0.48
UBE3D-204ENST00000430071 ZNF705GA8MUZ8 300 aaPredicted RBP12.05□□□□□ -0.48
UBE3D-204ENST00000430071 F6UZH7 168 aa12.05□□□□□ -0.48
UBE3D-204ENST00000430071 ZNF324O75467 553 aaPredicted RBP12.05□□□□□ -0.48
UBE3D-204ENST00000430071 FAM222AQ5U5X8 452 aa12.05□□□□□ -0.48
UBE3D-204ENST00000430071 TMEM256Q8N2U0 113 aa12.05□□□□□ -0.48
UBE3D-204ENST00000430071 C20orf144Q9BQM9 153 aa12.05□□□□□ -0.48
UBE3D-204ENST00000430071 DKK2Q9UBU2 259 aa12.05□□□□□ -0.48
UBE3D-204ENST00000430071 LOC102723971A0A1B0GUV8 181 aa12.04□□□□□ -0.48
UBE3D-204ENST00000430071 SMIM9A6NGZ8 99 aa12.04□□□□□ -0.48
UBE3D-204ENST00000430071 FBLL1A6NHQ2 334 aaKnown RBP12.04□□□□□ -0.48
UBE3D-204ENST00000430071 MEF2BQ02080 365 aaPredicted RBP12.04□□□□□ -0.48
UBE3D-204ENST00000430071 Q86TA4 180 aa12.04□□□□□ -0.48
UBE3D-204ENST00000430071 C8orf49Q96NF6 230 aa12.04□□□□□ -0.48
UBE3D-204ENST00000430071 LINC01587Q99440 93 aa12.04□□□□□ -0.48
UBE3D-204ENST00000430071 TREM1Q9NP99 234 aa12.04□□□□□ -0.48
UBE3D-204ENST00000430071 VAX2Q9UIW0 290 aa12.04□□□□□ -0.48
UBE3D-204ENST00000430071 H7BYZ3 331 aa12.03□□□□□ -0.48
UBE3D-204ENST00000430071 AZU1P20160 251 aa12.03□□□□□ -0.48
UBE3D-204ENST00000430071 TCTAP57738 103 aa12.03□□□□□ -0.48
UBE3D-204ENST00000430071 C11orf52Q96A22 123 aa12.03□□□□□ -0.48
UBE3D-204ENST00000430071 TXNDC17Q9BRA2 123 aa12.03□□□□□ -0.48
UBE3D-204ENST00000430071 NIPSNAP3BQ9BS92 247 aa12.03□□□□□ -0.48
UBE3D-204ENST00000430071 SPART-AS1P0CW21 52 aa12.02□□□□□ -0.49
UBE3D-204ENST00000430071 AKR1C3P42330 323 aa12.02□□□□□ -0.49
UBE3D-204ENST00000430071 TAS2R60P59551 318 aa12.02□□□□□ -0.49
UBE3D-204ENST00000430071 IFITM2Q01629 132 aa12.02□□□□□ -0.49
UBE3D-204ENST00000430071 RRN3P1Q2M238 152 aa12.02□□□□□ -0.49
UBE3D-204ENST00000430071 FMC1Q96HJ9 113 aa12.02□□□□□ -0.49
UBE3D-204ENST00000430071 NDFIP1Q9BT67 221 aa12.02□□□□□ -0.49
UBE3D-204ENST00000430071 RBFOX3A6NFN3 312 aa12.01□□□□□ -0.49
UBE3D-204ENST00000430071 HTN1P15515 57 aa12.01□□□□□ -0.49
UBE3D-204ENST00000430071 ZNF80P51504 273 aaPredicted RBP12.01□□□□□ -0.49
UBE3D-204ENST00000430071 UBE2G1P62253 170 aa12.01□□□□□ -0.49
UBE3D-204ENST00000430071 TMEM183BQ1AE95 376 aa12.01□□□□□ -0.49
UBE3D-204ENST00000430071 Q6AWC8 147 aa12.01□□□□□ -0.49
UBE3D-204ENST00000430071 DERL1Q9BUN8 251 aa12.01□□□□□ -0.49
UBE3D-204ENST00000430071 TRBV6-1A0A0K0K1D8 114 aa12□□□□□ -0.49
UBE3D-204ENST00000430071 TMEM189A5PLL7 270 aa12□□□□□ -0.49
UBE3D-204ENST00000430071 PDE6DO43924 150 aa12□□□□□ -0.49
UBE3D-204ENST00000430071 TAGLN2P37802 199 aaKnown RBP12□□□□□ -0.49
UBE3D-204ENST00000430071 ZNF506Q5JVG8 444 aa12□□□□□ -0.49
UBE3D-204ENST00000430071 SAPCD1Q5SSQ6 148 aa12□□□□□ -0.49
UBE3D-204ENST00000430071 LTAP01374 205 aa11.99□□□□□ -0.49
UBE3D-204ENST00000430071 HTN3P15516 51 aa11.99□□□□□ -0.49
UBE3D-204ENST00000430071 TOR2AQ5JU69 321 aa11.99□□□□□ -0.49
UBE3D-204ENST00000430071 PYGO2Q9BRQ0 406 aa11.99□□□□□ -0.49
UBE3D-204ENST00000430071 PLAC8L1A1L4L8 177 aa11.98□□□□□ -0.49
UBE3D-204ENST00000430071 GCGP01275 180 aa11.98□□□□□ -0.49
UBE3D-204ENST00000430071 RPL35P42766 123 aaKnown RBP11.98□□□□□ -0.49
UBE3D-204ENST00000430071 SMUG1Q53HV7 270 aa11.98□□□□□ -0.49
UBE3D-204ENST00000430071 RNASE8Q8TDE3 154 aaKnown RBP11.98□□□□□ -0.49
UBE3D-204ENST00000430071 FAM210AQ96ND0 272 aa11.98□□□□□ -0.49
UBE3D-204ENST00000430071 LINC00467Q9BRT7 94 aa11.98□□□□□ -0.49
UBE3D-204ENST00000430071 ZFP30Q9Y2G7 519 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms