RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 CKS2P33552 79 aa0.87□□□□□ -2.27
GYPB-201ENST00000429670 AKR1D1P51857 326 aa0.87□□□□□ -2.27
GYPB-201ENST00000429670 LINC00575Q6W349 94 aa0.87□□□□□ -2.27
GYPB-201ENST00000429670 C10orf111Q8N326 155 aa0.87□□□□□ -2.27
GYPB-201ENST00000429670 C5orf17Q8NAS9 161 aa0.87□□□□□ -2.27
GYPB-201ENST00000429670 OR10AC1Q8NH08 325 aa0.87□□□□□ -2.27
GYPB-201ENST00000429670 SMIM7Q9BQ49 75 aa0.87□□□□□ -2.27
GYPB-201ENST00000429670 CALML5Q9NZT1 146 aa0.87□□□□□ -2.27
GYPB-201ENST00000429670 GSKIPQ9P0R6 139 aa0.87□□□□□ -2.27
GYPB-201ENST00000429670 PAIP2BQ9ULR5 123 aaKnown RBP0.87□□□□□ -2.27
GYPB-201ENST00000429670 NUP210Q8TEM1 1887 aaPredicted RBP0.86□□□□□ -2.27
GYPB-201ENST00000429670 COL6A6A6NMZ7 2263 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 MYLKQ15746 1914 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 TRAV2A0A0B4J234 112 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 A0A1W2PPB8 328 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 A0A1W2PRS3 328 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 BBIP1A8MTZ0 92 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 KIR3DP1A8MWS1 328 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 YPEL1O60688 119 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 NCR2O95944 276 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 GYPBP06028 91 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 MPC1LP0DKB6 136 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 CKS1BP61024 79 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 SMCO1Q147U7 214 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 C3orf62Q6ZUJ4 267 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 DEFB132Q7Z7B7 95 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 SBSPONQ8IVN8 264 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 MMGT1Q8N4V1 131 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 OTOSQ8NHW6 89 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 WFDC10AQ9H1F0 79 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 BOKQ9UMX3 212 aaPredicted RBP0.86□□□□□ -2.27
GYPB-201ENST00000429670 DNAJC15Q9Y5T4 150 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 UNC13CQ8NB66 2214 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 OVOS2A0A0J9YW53 1432 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 OVOS2Q6IE36 1432 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 FGD6Q6ZV73 1430 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 MYO5AQ9Y4I1 1855 aaKnown RBP0.86□□□□□ -2.27
GYPB-201ENST00000429670 UHRF1BP1LA0JNW5 1464 aa0.86□□□□□ -2.27
GYPB-201ENST00000429670 IGHV1-24A0A0C4DH33 117 aa0.85□□□□□ -2.27
GYPB-201ENST00000429670 DISP2A7MBM2 1401 aa0.85□□□□□ -2.27
GYPB-201ENST00000429670 NCR3O14931 201 aa0.85□□□□□ -2.27
GYPB-201ENST00000429670 CD14P08571 375 aa0.85□□□□□ -2.27
GYPB-201ENST00000429670 PLGLB1Q02325 96 aa0.85□□□□□ -2.27
GYPB-201ENST00000429670 RHOHQ15669 191 aa0.85□□□□□ -2.27
GYPB-201ENST00000429670 NEDD8Q15843 81 aa0.85□□□□□ -2.27
GYPB-201ENST00000429670 ARHGAP31Q2M1Z3 1444 aa0.85□□□□□ -2.27
GYPB-201ENST00000429670 LZICQ8WZA0 190 aa0.85□□□□□ -2.27
GYPB-201ENST00000429670 SLC35B3Q9H1N7 401 aa0.85□□□□□ -2.27
GYPB-201ENST00000429670 CEP192Q8TEP8 1941 aa0.85□□□□□ -2.27
GYPB-201ENST00000429670 N4BP2Q86UW6 1770 aaPredicted RBP0.85□□□□□ -2.27
GYPB-201ENST00000429670 MGAMO43451 1857 aa0.84□□□□□ -2.27
GYPB-201ENST00000429670 PTPRGP23470 1445 aa0.84□□□□□ -2.27
GYPB-201ENST00000429670 EDF1O60869 148 aaKnown RBP0.84□□□□□ -2.27
GYPB-201ENST00000429670 IGF2P01344 180 aa0.84□□□□□ -2.27
GYPB-201ENST00000429670 CD3DP04234 171 aa0.84□□□□□ -2.27
GYPB-201ENST00000429670 KDELR1P24390 212 aa0.84□□□□□ -2.27
GYPB-201ENST00000429670 EFNA4P52798 201 aa0.84□□□□□ -2.27
GYPB-201ENST00000429670 ARPC4P59998 168 aa0.84□□□□□ -2.27
GYPB-201ENST00000429670 PCBD1P61457 104 aa0.84□□□□□ -2.27
GYPB-201ENST00000429670 OCIAD2Q56VL3 154 aa0.84□□□□□ -2.27
GYPB-201ENST00000429670 OR8J3Q8NGG0 315 aa0.84□□□□□ -2.27
GYPB-201ENST00000429670 LPAR5Q9H1C0 372 aa0.84□□□□□ -2.27
GYPB-201ENST00000429670 PLXNA4Q9HCM2 1894 aa0.84□□□□□ -2.28
GYPB-201ENST00000429670 MCM3APO60318 1980 aa0.83□□□□□ -2.28
GYPB-201ENST00000429670 TNRC6AQ8NDV7 1962 aaKnown RBP0.83□□□□□ -2.28
GYPB-201ENST00000429670 WDR97A6NE52 1622 aa0.83□□□□□ -2.28
GYPB-201ENST00000429670 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.83□□□□□ -2.28
GYPB-201ENST00000429670 LOC107984156A0A0G2JMH3 177 aa0.83□□□□□ -2.28
GYPB-201ENST00000429670 CDC42EP2O14613 210 aa0.83□□□□□ -2.28
GYPB-201ENST00000429670 RBP4P02753 201 aa0.83□□□□□ -2.28
GYPB-201ENST00000429670 HIST1H1AQ02539 215 aaPredicted RBP0.83□□□□□ -2.28
GYPB-201ENST00000429670 SMIM21Q3B7S5 101 aa0.83□□□□□ -2.28
GYPB-201ENST00000429670 ATP11AUNQ6ZP68 121 aa0.83□□□□□ -2.28
GYPB-201ENST00000429670 IDO2Q6ZQW0 420 aa0.83□□□□□ -2.28
GYPB-201ENST00000429670 ARL17AQ8IVW1 177 aa0.83□□□□□ -2.28
GYPB-201ENST00000429670 ATP6V0E2Q8NHE4 81 aa0.83□□□□□ -2.28
GYPB-201ENST00000429670 BANF2Q9H503 90 aa0.83□□□□□ -2.28
GYPB-201ENST00000429670 COPZ2Q9P299 210 aa0.83□□□□□ -2.28
GYPB-201ENST00000429670 ANKRD31Q8N7Z5 1873 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 TRAV23DV6A0A075B6W5 121 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 A0A1W2PPM0 123 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 NUPR2A6NF83 97 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 M0R2P5 195 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 HMGN1P05114 100 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 FXYD4P59646 89 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 NCS1P62166 190 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 SNRPD3P62318 126 aaKnown RBP0.82□□□□□ -2.28
GYPB-201ENST00000429670 GLYATL3Q5SZD4 288 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 ATOH7Q8N100 152 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 PPDPFLQ8WWR9 84 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 DMAC1Q96GE9 116 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 TAS2R8Q9NYW2 309 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 MRPL35Q9NZE8 188 aaKnown RBP0.82□□□□□ -2.28
GYPB-201ENST00000429670 COMMD3Q9UBI1 195 aa0.82□□□□□ -2.28
GYPB-201ENST00000429670 MYO18AQ92614 2054 aaKnown RBP0.82□□□□□ -2.28
GYPB-201ENST00000429670 TRBV20-1A0A075B6N2 111 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 J3QR89 54 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 IGLC6P0CF74 106 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 ADCYAP1P18509 176 aa0.81□□□□□ -2.28
GYPB-201ENST00000429670 CSAG1Q6PB30 78 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms