RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 THAP8Q8NA92 274 aa6.91□□□□□ -1.3
CDC42BPA-206ENST00000429440 SMKR1H3BMG3 65 aa6.9□□□□□ -1.3
CDC42BPA-206ENST00000429440 MLANAQ16655 118 aa6.9□□□□□ -1.3
CDC42BPA-206ENST00000429440 SIGLEC15Q6ZMC9 328 aa6.9□□□□□ -1.3
CDC42BPA-206ENST00000429440 LINC00643Q86TS7 51 aa6.9□□□□□ -1.3
CDC42BPA-206ENST00000429440 ZNF71Q9NQZ8 489 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-206ENST00000429440 INS-IGF2F8WCM5 200 aa6.9□□□□□ -1.31
CDC42BPA-206ENST00000429440 SPINT2O43291 252 aa6.9□□□□□ -1.31
CDC42BPA-206ENST00000429440 PSPNO60542 156 aa6.9□□□□□ -1.31
CDC42BPA-206ENST00000429440 OXTP01178 125 aa6.9□□□□□ -1.31
CDC42BPA-206ENST00000429440 IGHV3-30P01768 117 aa6.9□□□□□ -1.31
CDC42BPA-206ENST00000429440 IGHV3-33P01772 117 aa6.9□□□□□ -1.31
CDC42BPA-206ENST00000429440 IGHV3-30-5P0DP03 117 aa6.9□□□□□ -1.31
CDC42BPA-206ENST00000429440 GP9P14770 177 aa6.9□□□□□ -1.31
CDC42BPA-206ENST00000429440 B3GALT5-AS1P59052 145 aa6.9□□□□□ -1.31
CDC42BPA-206ENST00000429440 FAM90A1Q86YD7 464 aa6.9□□□□□ -1.31
CDC42BPA-206ENST00000429440 FRYQ5TBA9 3013 aa6.9□□□□□ -1.31
CDC42BPA-206ENST00000429440 GPR179Q6PRD1 2367 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 IGLV2-18A0A075B6J9 118 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 ATOX1O00244 68 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 Q0VFX4 171 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 HES3Q5TGS1 186 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 C1orf43Q9BWL3 253 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 SRXN1Q9BYN0 137 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 PYGO1Q9Y3Y4 419 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 V9GYY9 64 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 A0A0J9YY99 117 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 IGHV3-13P01766 116 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 CRIP1P50238 77 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 GOLT1AQ6ZVE7 132 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 AAED1Q7RTV5 226 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 C5orf38Q86SI9 138 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 METTL26Q96S19 204 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 PRORYQ9H606 182 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 AHCTF1Q8WYP5 2266 aa6.89□□□□□ -1.31
CDC42BPA-206ENST00000429440 IGHV3-43A0A0B4J1X8 118 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 IGHV3-43DP0DP04 118 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 PRDX2P32119 198 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 SSR4P51571 173 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 SUB1P53999 127 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 C2orf82Q6UX34 121 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 RPS19BP1Q86WX3 136 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 ZCCHC24Q8N2G6 241 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 PLEKHB2Q96CS7 222 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 RNF185Q96GF1 192 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 METRNQ9UJH8 293 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 BDP1A6H8Y1 2624 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 IGKV1D-37A0A075B6S9 117 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 A0A0B4J2C4 111 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 hADV29S1A0JD25 119 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 DEFB108AA8MXU0 73 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 UPK2O00526 184 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 HIST1H4AP62805 103 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 LAGE3Q14657 143 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 SLC25A29Q8N8R3 303 aa6.88□□□□□ -1.31
CDC42BPA-206ENST00000429440 NCOR1O75376 2440 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 FREM1Q5H8C1 2179 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 A0A0G2JNJ9 132 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 PLAUP00749 431 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 RFPL3SP0C7P2 107 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 ZNF415Q09FC8 603 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 GGNQ86UU5 652 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 PRR7Q8TB68 274 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 Q9UFV3 132 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 SPENQ96T58 3664 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 TRAV13-1A0A0B4J241 112 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 TRBV30A0A0K0K1B3 111 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 LOC400499M0QZD8 3231 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 SDIM1Q6ZPB5 146 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 INTS1Q8N201 2190 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 TMEM86BQ8N661 226 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 C8orf31Q8N9H6 132 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 FAM19A4Q96LR4 140 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 PRR25Q96S07 402 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 TMEM14CQ9P0S9 112 aa6.87□□□□□ -1.31
CDC42BPA-206ENST00000429440 ASPMQ8IZT6 3477 aa6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 RPL35AP18077 110 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 HERVK_113P61574 105 aa6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 RPL39P5Q59GN2 51 aa6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 VKORC1Q9BQB6 163 aa6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 CNFNQ9BYD5 112 aa6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 CUL9Q8IWT3 2517 aa6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 C17orf100A8MU93 164 aa6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 ZNF883P0CG24 379 aa6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 ERHP84090 104 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 WDR86Q86TI4 376 aa6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 TMEM105Q8N8V8 129 aa6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 TMEM263Q8WUH6 116 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 SHANK2-AS3Q9BTD1 123 aa6.86□□□□□ -1.31
CDC42BPA-206ENST00000429440 PINLYPA6NC86 204 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 H7C423 109 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 ZNF22P17026 224 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 FOLR3P41439 243 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 LOXL3P58215 753 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 COX8CQ7Z4L0 72 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 AGPAT4-IT1Q9H0P7 198 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 GNG12Q9UBI6 72 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 TNCP24821 2201 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 LY6LH3BQJ8 138 aa6.85□□□□□ -1.31
CDC42BPA-206ENST00000429440 EDN2P20800 178 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms