RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 KCNIP2Q9NS61 270 aa11.24□□□□□ -0.61
VARS-216ENST00000428445 ZNF492Q9P255 531 aa11.24□□□□□ -0.61
VARS-216ENST00000428445 PRO0255Q9UI72 69 aa11.24□□□□□ -0.61
VARS-216ENST00000428445 HHLA3Q9XRX5 114 aa11.24□□□□□ -0.61
VARS-216ENST00000428445 IGHV1OR15-1A0A075B7D0 117 aa11.23□□□□□ -0.61
VARS-216ENST00000428445 A0A087WTM6 91 aa11.23□□□□□ -0.61
VARS-216ENST00000428445 RGS13O14921 159 aa11.23□□□□□ -0.61
VARS-216ENST00000428445 SFTA3P0C7M3 94 aa11.23□□□□□ -0.61
VARS-216ENST00000428445 CYCSP99999 105 aaKnown RBP11.23□□□□□ -0.61
VARS-216ENST00000428445 SLC25A2Q9BXI2 301 aa11.23□□□□□ -0.61
VARS-216ENST00000428445 MRPL32Q9BYC8 188 aaKnown RBP11.23□□□□□ -0.61
VARS-216ENST00000428445 MDFICQ9P1T7 246 aa11.23□□□□□ -0.61
VARS-216ENST00000428445 RBAKDNA6NC62 111 aa11.22□□□□□ -0.61
VARS-216ENST00000428445 EREGO14944 169 aa11.22□□□□□ -0.61
VARS-216ENST00000428445 NHLH2Q02577 135 aa11.22□□□□□ -0.61
VARS-216ENST00000428445 MRPL23Q16540 153 aaKnown RBP11.22□□□□□ -0.61
VARS-216ENST00000428445 MUC21Q5SSG8 566 aa11.22□□□□□ -0.61
VARS-216ENST00000428445 MIR17HGQ75NE6 70 aa11.22□□□□□ -0.61
VARS-216ENST00000428445 WFDC10BQ8IUB3 73 aa11.22□□□□□ -0.61
VARS-216ENST00000428445 Q8TAT8 98 aa11.22□□□□□ -0.61
VARS-216ENST00000428445 FAM167A-AS1Q96KT0 104 aa11.22□□□□□ -0.61
VARS-216ENST00000428445 NMES1Q9C002 83 aa11.22□□□□□ -0.61
VARS-216ENST00000428445 MYCBP2O75592 4640 aa11.21□□□□□ -0.61
VARS-216ENST00000428445 TRAV9-2A0A087WT02 112 aa11.21□□□□□ -0.61
VARS-216ENST00000428445 CSN1S1P47710 185 aa11.21□□□□□ -0.61
VARS-216ENST00000428445 ZNF138P52744 262 aa11.21□□□□□ -0.61
VARS-216ENST00000428445 NFE4Q86UQ8 179 aa11.21□□□□□ -0.61
VARS-216ENST00000428445 IQCF2Q8IXL9 164 aa11.21□□□□□ -0.61
VARS-216ENST00000428445 OR5C1Q8NGR4 320 aa11.21□□□□□ -0.61
VARS-216ENST00000428445 ARPC5LQ9BPX5 153 aa11.21□□□□□ -0.61
VARS-216ENST00000428445 LENEPQ9Y5L5 61 aa11.21□□□□□ -0.61
VARS-216ENST00000428445 C17orf112F2Z3M2 114 aa11.2□□□□□ -0.62
VARS-216ENST00000428445 NEGR1Q7Z3B1 354 aa11.2□□□□□ -0.62
VARS-216ENST00000428445 ZNF479Q96JC4 524 aa11.2□□□□□ -0.62
VARS-216ENST00000428445 PAXXQ9BUH6 204 aa11.2□□□□□ -0.62
VARS-216ENST00000428445 PTTG2Q9NZH5 202 aa11.2□□□□□ -0.62
VARS-216ENST00000428445 FLG2Q5D862 2391 aaPredicted RBP11.2□□□□□ -0.62
VARS-216ENST00000428445 DMBT1Q9UGM3 2413 aaPredicted RBP11.19□□□□□ -0.62
VARS-216ENST00000428445 TRGV4A0A0C4DH28 118 aa11.19□□□□□ -0.62
VARS-216ENST00000428445 K7EQD1 137 aa11.19□□□□□ -0.62
VARS-216ENST00000428445 IFNA5P01569 189 aa11.19□□□□□ -0.62
VARS-216ENST00000428445 OR10J4P0C629 311 aa11.19□□□□□ -0.62
VARS-216ENST00000428445 ASAH1Q13510 395 aa11.19□□□□□ -0.62
VARS-216ENST00000428445 THAP6Q8TBB0 222 aa11.19□□□□□ -0.62
VARS-216ENST00000428445 S100ZQ8WXG8 99 aa11.19□□□□□ -0.62
VARS-216ENST00000428445 SPXQ9BT56 116 aa11.19□□□□□ -0.62
VARS-216ENST00000428445 WDR61Q9GZS3 305 aaKnown RBP11.19□□□□□ -0.62
VARS-216ENST00000428445 LY96Q9Y6Y9 160 aa11.19□□□□□ -0.62
VARS-216ENST00000428445 DNAH8Q96JB1 4490 aa11.19□□□□□ -0.62
VARS-216ENST00000428445 ZNF415Q09FC8 603 aa11.18□□□□□ -0.62
VARS-216ENST00000428445 ZNF266Q14584 549 aa11.18□□□□□ -0.62
VARS-216ENST00000428445 CDPF1Q6NVV7 123 aa11.18□□□□□ -0.62
VARS-216ENST00000428445 RASL10AQ92737 203 aa11.18□□□□□ -0.62
VARS-216ENST00000428445 FRZBQ92765 325 aa11.18□□□□□ -0.62
VARS-216ENST00000428445 FXYD5Q96DB9 178 aa11.18□□□□□ -0.62
VARS-216ENST00000428445 MSRB1Q9NZV6 116 aa11.18□□□□□ -0.62
VARS-216ENST00000428445 LOC100131303A0A0U1RQF7 123 aa11.17□□□□□ -0.62
VARS-216ENST00000428445 GYPEP15421 78 aa11.17□□□□□ -0.62
VARS-216ENST00000428445 ARL6IP6Q8N6S5 226 aa11.17□□□□□ -0.62
VARS-216ENST00000428445 TMED6Q8WW62 240 aa11.17□□□□□ -0.62
VARS-216ENST00000428445 PHYHIPLQ96FC7 376 aa11.17□□□□□ -0.62
VARS-216ENST00000428445 ORM1P02763 201 aa11.16□□□□□ -0.62
VARS-216ENST00000428445 GCSHP23434 173 aa11.16□□□□□ -0.62
VARS-216ENST00000428445 SRIP30626 198 aa11.16□□□□□ -0.62
VARS-216ENST00000428445 Q6AWC8 147 aa11.16□□□□□ -0.62
VARS-216ENST00000428445 OR10G4Q8NGN3 311 aa11.16□□□□□ -0.62
VARS-216ENST00000428445 SRRM2Q9UQ35 2752 aaKnown RBP11.16□□□□□ -0.62
VARS-216ENST00000428445 OR7C2O60412 319 aa11.15□□□□□ -0.62
VARS-216ENST00000428445 EIF3GO75821 320 aaKnown RBP eCLIP11.15□□□□□ -0.62
VARS-216ENST00000428445 TAS2R45P59539 299 aa11.15□□□□□ -0.62
VARS-216ENST00000428445 RANP62826 216 aaKnown RBP11.15□□□□□ -0.62
VARS-216ENST00000428445 TMEM183BQ1AE95 376 aa11.15□□□□□ -0.62
VARS-216ENST00000428445 TMEM183AQ8IXX5 376 aa11.15□□□□□ -0.62
VARS-216ENST00000428445 BOLA1Q9Y3E2 137 aa11.15□□□□□ -0.62
VARS-216ENST00000428445 TRGV11A0A075B6L2 103 aa11.14□□□□□ -0.63
VARS-216ENST00000428445 SIX6O95475 246 aa11.14□□□□□ -0.63
VARS-216ENST00000428445 TDRG1Q3Y452 100 aa11.14□□□□□ -0.63
VARS-216ENST00000428445 FAM159AQ6UWV7 190 aa11.14□□□□□ -0.63
VARS-216ENST00000428445 SH2D6Q7Z4S9 175 aa11.14□□□□□ -0.63
VARS-216ENST00000428445 ENKURQ8TC29 256 aa11.14□□□□□ -0.63
VARS-216ENST00000428445 OR5AC2Q9NZP5 309 aa11.14□□□□□ -0.63
VARS-216ENST00000428445 DIRC3C9JPN6 131 aa11.13□□□□□ -0.63
VARS-216ENST00000428445 H0YIZ8 118 aa11.13□□□□□ -0.63
VARS-216ENST00000428445 GNRH2O43555 120 aa11.13□□□□□ -0.63
VARS-216ENST00000428445 CRYGDP07320 174 aa11.13□□□□□ -0.63
VARS-216ENST00000428445 EVI2AP22794 236 aa11.13□□□□□ -0.63
VARS-216ENST00000428445 KHDC3LQ587J8 217 aa11.13□□□□□ -0.63
VARS-216ENST00000428445 FAM74A1Q5RGS3 127 aa11.13□□□□□ -0.63
VARS-216ENST00000428445 ATP5SQ99766 215 aa11.13□□□□□ -0.63
VARS-216ENST00000428445 NAGKQ9UJ70 344 aa11.13□□□□□ -0.63
VARS-216ENST00000428445 IGHV3-16A0A0C4DH30 117 aa11.12□□□□□ -0.63
VARS-216ENST00000428445 PET100P0DJ07 73 aa11.12□□□□□ -0.63
VARS-216ENST00000428445 LRRC37A5PQ49AS3 106 aa11.12□□□□□ -0.63
VARS-216ENST00000428445 SCGB1C1Q8TD33 95 aa11.12□□□□□ -0.63
VARS-216ENST00000428445 PCNPQ8WW12 178 aaKnown RBP11.12□□□□□ -0.63
VARS-216ENST00000428445 TXNDC17Q9BRA2 123 aa11.12□□□□□ -0.63
VARS-216ENST00000428445 C10orf126Q8N4M7 172 aa11.11□□□□□ -0.63
VARS-216ENST00000428445 PPP1R1CQ8WVI7 109 aa11.11□□□□□ -0.63
VARS-216ENST00000428445 OTORQ9NRC9 128 aa11.11□□□□□ -0.63
VARS-216ENST00000428445 TRAV4A0A0B4J268 109 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms