RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 RPS3P23396 243 aaKnown RBP eCLIP0.51□□□□□ -2.33
GCFC2-203ENST00000427862 KDELR1P24390 212 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 BLCAPP62952 87 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 SAMD13Q5VXD3 122 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 CSAG1Q6PB30 78 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 FANCMQ8IYD8 2048 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 NAT14Q8WUY8 206 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 DDA1Q9BW61 102 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 CBLN4Q9NTU7 201 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 DSPPQ9NZW4 1301 aa0.51□□□□□ -2.33
GCFC2-203ENST00000427862 A2MP01023 1474 aa0.5□□□□□ -2.33
GCFC2-203ENST00000427862 FGD6Q6ZV73 1430 aa0.5□□□□□ -2.33
GCFC2-203ENST00000427862 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
GCFC2-203ENST00000427862 PRH1P02810 166 aa0.5□□□□□ -2.33
GCFC2-203ENST00000427862 RPL22P35268 128 aaKnown RBP0.5□□□□□ -2.33
GCFC2-203ENST00000427862 ETV6P41212 452 aa0.5□□□□□ -2.33
GCFC2-203ENST00000427862 GTF2A1P52655 376 aaPredicted RBP0.5□□□□□ -2.33
GCFC2-203ENST00000427862 QRFPP83859 136 aa0.5□□□□□ -2.33
GCFC2-203ENST00000427862 OR51A4Q8NGJ6 313 aa0.5□□□□□ -2.33
GCFC2-203ENST00000427862 SELENOSQ9BQE4 189 aa0.5□□□□□ -2.33
GCFC2-203ENST00000427862 ZFC3H1O60293 1989 aaKnown RBP0.5□□□□□ -2.33
GCFC2-203ENST00000427862 USP24Q9UPU5 2620 aa0.5□□□□□ -2.33
GCFC2-203ENST00000427862 FAM135BQ49AJ0 1406 aa0.49□□□□□ -2.33
GCFC2-203ENST00000427862 TMEM189A5PLL7 270 aa0.49□□□□□ -2.33
GCFC2-203ENST00000427862 SMIM15Q7Z3B0 74 aa0.49□□□□□ -2.33
GCFC2-203ENST00000427862 TMEM35BQ8NCS4 154 aa0.49□□□□□ -2.33
GCFC2-203ENST00000427862 OR8J3Q8NGG0 315 aa0.49□□□□□ -2.33
GCFC2-203ENST00000427862 OR5A2Q8NGI9 324 aa0.49□□□□□ -2.33
GCFC2-203ENST00000427862 CCDC115Q96NT0 180 aa0.49□□□□□ -2.33
GCFC2-203ENST00000427862 SMIM7Q9BQ49 75 aa0.49□□□□□ -2.33
GCFC2-203ENST00000427862 MRPL35Q9NZE8 188 aaKnown RBP0.49□□□□□ -2.33
GCFC2-203ENST00000427862 MRPL36Q9P0J6 103 aaKnown RBP0.49□□□□□ -2.33
GCFC2-203ENST00000427862 MYH3P11055 1940 aa0.48□□□□□ -2.33
GCFC2-203ENST00000427862 CACNA1EQ15878 2313 aa0.48□□□□□ -2.33
GCFC2-203ENST00000427862 M0QZK8 103 aa0.48□□□□□ -2.33
GCFC2-203ENST00000427862 EDF1O60869 148 aaKnown RBP0.48□□□□□ -2.33
GCFC2-203ENST00000427862 IGF2P01344 180 aa0.48□□□□□ -2.33
GCFC2-203ENST00000427862 HBDP02042 147 aa0.48□□□□□ -2.33
GCFC2-203ENST00000427862 EVI2AP22794 236 aa0.48□□□□□ -2.33
GCFC2-203ENST00000427862 S100GP29377 79 aa0.48□□□□□ -2.33
GCFC2-203ENST00000427862 SPINK13Q1W4C9 94 aa0.48□□□□□ -2.33
GCFC2-203ENST00000427862 DEFB132Q7Z7B7 95 aa0.48□□□□□ -2.33
GCFC2-203ENST00000427862 SMR3AQ99954 134 aa0.48□□□□□ -2.33
GCFC2-203ENST00000427862 FAM103A1Q9BTL3 118 aaKnown RBP0.48□□□□□ -2.33
GCFC2-203ENST00000427862 APCP25054 2843 aa0.47□□□□□ -2.33
GCFC2-203ENST00000427862 ASH1LQ9NR48 2969 aaKnown RBP0.47□□□□□ -2.33
GCFC2-203ENST00000427862 PRORSD1PA6NEY8 169 aa0.47□□□□□ -2.33
GCFC2-203ENST00000427862 UQCRQO14949 82 aa0.47□□□□□ -2.33
GCFC2-203ENST00000427862 ASB16-AS1Q495Z4 193 aa0.47□□□□□ -2.33
GCFC2-203ENST00000427862 GLYATL3Q5SZD4 288 aa0.47□□□□□ -2.33
GCFC2-203ENST00000427862 BRK1Q8WUW1 75 aa0.47□□□□□ -2.33
GCFC2-203ENST00000427862 SKA2Q8WVK7 121 aaPredicted RBP0.47□□□□□ -2.33
GCFC2-203ENST00000427862 TMEM30CPA0ZSE6 113 aa0.46□□□□□ -2.34
GCFC2-203ENST00000427862 HIGD1CA8MV81 97 aa0.46□□□□□ -2.34
GCFC2-203ENST00000427862 RPS28P62857 69 aaKnown RBP0.46□□□□□ -2.34
GCFC2-203ENST00000427862 RHOHQ15669 191 aa0.46□□□□□ -2.34
GCFC2-203ENST00000427862 IDO2Q6ZQW0 420 aa0.46□□□□□ -2.34
GCFC2-203ENST00000427862 COMMD3Q9UBI1 195 aa0.46□□□□□ -2.34
GCFC2-203ENST00000427862 TSTD3H0UI37 97 aa0.45□□□□□ -2.34
GCFC2-203ENST00000427862 TPST1O60507 370 aa0.45□□□□□ -2.34
GCFC2-203ENST00000427862 CKS2P33552 79 aa0.45□□□□□ -2.34
GCFC2-203ENST00000427862 FXYD3Q14802 87 aa0.45□□□□□ -2.34
GCFC2-203ENST00000427862 LYPD5Q6UWN5 251 aa0.45□□□□□ -2.34
GCFC2-203ENST00000427862 LINC00208Q96KT6 92 aa0.45□□□□□ -2.34
GCFC2-203ENST00000427862 AHNAKQ09666 5890 aaKnown RBP0.45□□□□□ -2.34
GCFC2-203ENST00000427862 MUC5BQ9HC84 5762 aaPredicted RBP0.44□□□□□ -2.34
GCFC2-203ENST00000427862 IGHV1-24A0A0C4DH33 117 aa0.44□□□□□ -2.34
GCFC2-203ENST00000427862 A0A0G2JMM0 328 aa0.44□□□□□ -2.34
GCFC2-203ENST00000427862 NBDYA0A0U1RRE5 68 aa0.44□□□□□ -2.34
GCFC2-203ENST00000427862 LOC101927531A0A1B0GV80 90 aa0.44□□□□□ -2.34
GCFC2-203ENST00000427862 CDC42EP2O14613 210 aa0.44□□□□□ -2.34
GCFC2-203ENST00000427862 DMAC1Q96GE9 116 aa0.44□□□□□ -2.34
GCFC2-203ENST00000427862 NDUFAF1Q9Y375 327 aa0.44□□□□□ -2.34
GCFC2-203ENST00000427862 PTPRDP23468 1912 aa0.43□□□□□ -2.34
GCFC2-203ENST00000427862 PNMA8CA0A1B0GUJ8 204 aa0.43□□□□□ -2.34
GCFC2-203ENST00000427862 LY6G6CO95867 125 aa0.43□□□□□ -2.34
GCFC2-203ENST00000427862 SLC25A5P05141 298 aaKnown RBP0.43□□□□□ -2.34
GCFC2-203ENST00000427862 PSPHP78330 225 aa0.43□□□□□ -2.34
GCFC2-203ENST00000427862 C5orf56Q8N8D9 126 aa0.43□□□□□ -2.34
GCFC2-203ENST00000427862 OTOSQ8NHW6 89 aa0.43□□□□□ -2.34
GCFC2-203ENST00000427862 HSPB11Q9Y547 144 aa0.43□□□□□ -2.34
GCFC2-203ENST00000427862 MED23Q9ULK4 1368 aa0.43□□□□□ -2.34
GCFC2-203ENST00000427862 SPAG17Q6Q759 2223 aa0.42□□□□□ -2.34
GCFC2-203ENST00000427862 NUP210Q8TEM1 1887 aaPredicted RBP0.42□□□□□ -2.34
GCFC2-203ENST00000427862 J3KT08 172 aa0.42□□□□□ -2.34
GCFC2-203ENST00000427862 IGKCP01834 107 aa0.42□□□□□ -2.34
GCFC2-203ENST00000427862 RPL37P61927 97 aaKnown RBP0.42□□□□□ -2.34
GCFC2-203ENST00000427862 ZNF56Q15929 161 aa0.42□□□□□ -2.34
GCFC2-203ENST00000427862 ATG5Q9H1Y0 275 aa0.42□□□□□ -2.34
GCFC2-203ENST00000427862 GINS2Q9Y248 185 aa0.42□□□□□ -2.34
GCFC2-203ENST00000427862 KCPQ6ZWJ8 1503 aa0.42□□□□□ -2.34
GCFC2-203ENST00000427862 FRAS1Q86XX4 4008 aa0.41□□□□□ -2.34
GCFC2-203ENST00000427862 PBRM1Q86U86 1689 aa0.41□□□□□ -2.34
GCFC2-203ENST00000427862 GNG14A0A1W2PPG7 69 aa0.41□□□□□ -2.34
GCFC2-203ENST00000427862 H0YJX3 145 aa0.41□□□□□ -2.34
GCFC2-203ENST00000427862 DPM2O94777 84 aa0.41□□□□□ -2.34
GCFC2-203ENST00000427862 TCRAP04437 139 aa0.41□□□□□ -2.34
GCFC2-203ENST00000427862 KRTAP2-3P0C7H8 128 aa0.41□□□□□ -2.34
GCFC2-203ENST00000427862 IL7P13232 177 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms