RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 PSMB2P49721 201 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 FAM71F2Q6NXP2 309 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 EXOC3-AS1Q8N2X6 119 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 OR5A1Q8NGJ0 315 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 SLC50A1Q9BRV3 221 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 NCOR1P1Q9H4R4 102 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 TRAV8-1A0A0A6YYK1 113 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 IGHV3-53P01767 116 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 IGFL4Q6B9Z1 124 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 PSMG3-AS1Q96PY0 264 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 TMEM160Q9NX00 188 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 WDFY3Q8IZQ1 3526 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 TRBV20OR9-2A0A075B6H5 130 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 K7EN84 100 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 LHBP01229 141 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 CKS1BP61024 79 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 C9orf66Q5T8R8 295 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 OR5AN1Q8NGI8 311 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 LY96Q9Y6Y9 160 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 LAMA5O15230 3695 aa8.41□□□□□ -1.06
TCOF1-204ENST00000427724 HOXD3P31249 432 aaPredicted RBP8.4□□□□□ -1.06
TCOF1-204ENST00000427724 BVES-AS1Q5T3Y7 98 aa8.4□□□□□ -1.06
TCOF1-204ENST00000427724 SRRM4A7MD48 611 aaKnown RBP8.4□□□□□ -1.06
TCOF1-204ENST00000427724 SLURP1P55000 103 aa8.4□□□□□ -1.06
TCOF1-204ENST00000427724 SHISA2Q6UWI4 295 aa8.4□□□□□ -1.06
TCOF1-204ENST00000427724 LINC00311Q8N616 119 aa8.4□□□□□ -1.06
TCOF1-204ENST00000427724 OR11H6Q8NGC7 330 aa8.4□□□□□ -1.06
TCOF1-204ENST00000427724 MYOZ3Q8TDC0 251 aa8.4□□□□□ -1.06
TCOF1-204ENST00000427724 ASCL2Q99929 193 aa8.4□□□□□ -1.06
TCOF1-204ENST00000427724 ITPR3Q14573 2671 aa8.4□□□□□ -1.06
TCOF1-204ENST00000427724 GP9P14770 177 aa8.4□□□□□ -1.06
TCOF1-204ENST00000427724 PRELID3AQ96N28 172 aa8.4□□□□□ -1.06
TCOF1-204ENST00000427724 MS4A6AQ9H2W1 248 aa8.4□□□□□ -1.06
TCOF1-204ENST00000427724 FRYQ5TBA9 3013 aa8.4□□□□□ -1.06
TCOF1-204ENST00000427724 TRGV1A0A0A0MS02 117 aa8.4□□□□□ -1.07
TCOF1-204ENST00000427724 KLK15Q9H2R5 256 aa8.4□□□□□ -1.07
TCOF1-204ENST00000427724 SOX21Q9Y651 276 aaPredicted RBP8.4□□□□□ -1.07
TCOF1-204ENST00000427724 CPAMD8Q8IZJ3 1885 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 H7C2G1 150 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 VWC2Q2TAL6 325 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 ANKRD39Q53RE8 183 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 MTURNQ8N3F0 131 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 ZNF502Q8TBZ5 544 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 FMC1Q96HJ9 113 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 HSD52Q0P140 79 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 Q8N7P7 452 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 CHCHD1Q96BP2 118 aaKnown RBP8.39□□□□□ -1.07
TCOF1-204ENST00000427724 F5H768 121 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 PPIFP30405 207 aaKnown RBP8.39□□□□□ -1.07
TCOF1-204ENST00000427724 ASIPP42127 132 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 LYRM7Q5U5X0 104 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 TP73-AS1Q9UF72 201 aa8.39□□□□□ -1.07
TCOF1-204ENST00000427724 KMT2EQ8IZD2 1858 aa8.38□□□□□ -1.07
TCOF1-204ENST00000427724 ZNF292O60281 2723 aa8.38□□□□□ -1.07
TCOF1-204ENST00000427724 APOC4P55056 127 aa8.38□□□□□ -1.07
TCOF1-204ENST00000427724 TNFRSF18Q9Y5U5 241 aa8.38□□□□□ -1.07
TCOF1-204ENST00000427724 KIAA1549Q9HCM3 1950 aa8.38□□□□□ -1.07
TCOF1-204ENST00000427724 PSG3Q16557 428 aa8.38□□□□□ -1.07
TCOF1-204ENST00000427724 C19orf54Q5BKX5 351 aa8.38□□□□□ -1.07
TCOF1-204ENST00000427724 ZNF833PQ6ZTB9 187 aa8.38□□□□□ -1.07
TCOF1-204ENST00000427724 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.38□□□□□ -1.07
TCOF1-204ENST00000427724 BOD1L1Q8NFC6 3051 aa8.38□□□□□ -1.07
TCOF1-204ENST00000427724 DCHS1Q96JQ0 3298 aa8.38□□□□□ -1.07
TCOF1-204ENST00000427724 TRAV12-3A0A0B4J271 114 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 PSCAO43653 123 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 BRWD1-AS2P59051 145 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 TTC9CQ8N5M4 171 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 M0R3E3 92 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 PRR20EP86478 221 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 PRR20CP86479 221 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 PRR20DP86480 221 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 PRR20BP86481 221 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 PRR20AP86496 221 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 OTORQ9NRC9 128 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 PSG8Q9UQ74 426 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 WT1-ASQ06250 92 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 ZNF479Q96JC4 524 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 MAP1LC3AQ9H492 121 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 MRPL16Q9NX20 251 aaKnown RBP8.37□□□□□ -1.07
TCOF1-204ENST00000427724 A0A1W2PPR1 153 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 ADAMTSL5Q6ZMM2 481 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 OR9G4Q8NGQ1 327 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 SIRPDQ9H106 197 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 SMAD5-AS1Q9Y6J3 95 aa8.37□□□□□ -1.07
TCOF1-204ENST00000427724 TNFRSF13BO14836 293 aaPredicted RBP8.36□□□□□ -1.07
TCOF1-204ENST00000427724 TCRAP04437 139 aa8.36□□□□□ -1.07
TCOF1-204ENST00000427724 LEPP41159 167 aa8.36□□□□□ -1.07
TCOF1-204ENST00000427724 DAD1P61803 113 aa8.36□□□□□ -1.07
TCOF1-204ENST00000427724 DEFB125Q8N687 156 aa8.36□□□□□ -1.07
TCOF1-204ENST00000427724 C11orf52Q96A22 123 aa8.36□□□□□ -1.07
TCOF1-204ENST00000427724 A0A087WX48 190 aa8.36□□□□□ -1.07
TCOF1-204ENST00000427724 PROP1O75360 226 aa8.36□□□□□ -1.07
TCOF1-204ENST00000427724 AZU1P20160 251 aa8.36□□□□□ -1.07
TCOF1-204ENST00000427724 HIST2H2BDQ6DRA6 164 aa8.36□□□□□ -1.07
TCOF1-204ENST00000427724 NPIPB5A8MRT5 1133 aa8.36□□□□□ -1.07
TCOF1-204ENST00000427724 CFHR3Q02985 330 aa8.36□□□□□ -1.07
TCOF1-204ENST00000427724 ATP5L2Q7Z4Y8 100 aa8.36□□□□□ -1.07
TCOF1-204ENST00000427724 FNDC10F2Z333 226 aa8.35□□□□□ -1.07
TCOF1-204ENST00000427724 LGALS1P09382 135 aaKnown RBP8.35□□□□□ -1.07
TCOF1-204ENST00000427724 CD28P10747 220 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms